Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316485

Identifier: 158316485

GI number: 158316485

Start: 5635184

End: 5635426

Strand: Reverse

Name: 158316485

Synonym: Franean1_4720

Alternate gene names: NA

Gene position: 5635426-5635184 (Counterclockwise)

Preceding gene: 158316486

Following gene: 158316484

Centisome position: 62.74

GC content: 63.37

Gene sequence:

>243_bases
GTGGCTGACTTCACGATCCGTATTCCGCGTGTATCGGTCGCGATCTCGGAGGCGGAGCTGATCGAGCTTCTCGTGGATGA
GGGAGCGAACGTGTCTGAAGGCGACCCGTTGTTCATCATCGCGACGGACAAGGCCGAAACCGAGGTCGAAGCCGGCGCGT
CCGGCACGGTGCACTGGACCGGCGCCATCGAGACGGTCTATGAGATCGGTGCCGAGATCGGGACGATCCAGGCGTCGGGC
TGA

Upstream 100 bases:

>100_bases
GCCCCGCCGGCACTGGAATCGCAGATATACCCGAGCACCGAACGTATTGTCGCGGCGGTCCAGCAGACGCTGCGGTCGGA
AACGACCAGGGACGGTGCCT

Downstream 100 bases:

>100_bases
CACCGTATGGAAGCCCACGTGGCAGGAGGTTGATGTTGATGGCTCTCACCGACGACCGCCGCCCGGTCGCCACTCGCGAT
GTTCCGTTTGCGATGCGTGA

Product: biotin/lipoyl attachment domain-containing protein

Products: NA

Alternate protein names: Dihydrolipoamide Acetyltransferase

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MADFTIRIPRVSVAISEAELIELLVDEGANVSEGDPLFIIATDKAETEVEAGASGTVHWTGAIETVYEIGAEIGTIQASG

Sequences:

>Translated_80_residues
MADFTIRIPRVSVAISEAELIELLVDEGANVSEGDPLFIIATDKAETEVEAGASGTVHWTGAIETVYEIGAEIGTIQASG
>Mature_79_residues
ADFTIRIPRVSVAISEAELIELLVDEGANVSEGDPLFIIATDKAETEVEAGASGTVHWTGAIETVYEIGAEIGTIQASG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8347; Mature: 8216

Theoretical pI: Translated: 3.67; Mature: 3.67

Prosite motif: PS50968 BIOTINYL_LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFTIRIPRVSVAISEAELIELLVDEGANVSEGDPLFIIATDKAETEVEAGASGTVHWT
CCCEEEECCEEEEEECHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEECCCCCCEEEEC
GAIETVYEIGAEIGTIQASG
HHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure 
ADFTIRIPRVSVAISEAELIELLVDEGANVSEGDPLFIIATDKAETEVEAGASGTVHWT
CCEEEECCEEEEEECHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEECCCCCCEEEEC
GAIETVYEIGAEIGTIQASG
HHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA