| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is qor [C]
Identifier: 158316339
GI number: 158316339
Start: 5450729
End: 5451703
Strand: Reverse
Name: qor [C]
Synonym: Franean1_4568
Alternate gene names: 158316339
Gene position: 5451703-5450729 (Counterclockwise)
Preceding gene: 158316340
Following gene: 158316338
Centisome position: 60.7
GC content: 72.51
Gene sequence:
>975_bases GTGAGGGCCGCCCGCGTCGAGGCGTACGGCGGTCCGGCCGACGTCGTCATCCGCGACGTACCCGCTCCGGAGGCGACGCC GGGCCACGTCGTCGTCGATGTGGCCGCGGCCGCGCTGAATTTCCCCGACCTGCTGTTGATCGCGGACCGCTACCAGGTGT CGGCGCCGCTGCCCTTCACTCCCGGGTCCGAGTTCGCCGGCCGGGTGGCGGCGGTCGGTGACGGGGTCACCGGTCTCGCC GTCGGTGACCCTGTCCATGGCTCGGTCTTCTCCGGCGCGATGGCCGAGCAGGTGCTGGCGCCCACGACCGCGGTCTCGCC GATCCCGGCCGGGCTGTCGATGGTCGAGGCTGCGGCGTTCCGGGTGACGTACCTGACGGCGTACCACTGCCTGGTCACGA TCGGAGAGCTGGCGCCGGACCAGTGGGTCGTCGTCCTGGGGGCCGCCGGAGGCGTCGGCTCCGCGGCGGTCGACATCGCT GTCAGGCTCGGTGCGCGCGTCATCGCCGCGGCCTCGTCACCCGAGCGGCTGGCGGTCTGCAAGGAGCTCGGTGCCGAAAC GTGCATCGACTACACGACGGAAGACCTCAAGCTCCGGATCAAGGAGATCACGGGCGGCGGCGCCGACCTCGTCGTCGACC CGGTCGGCGACCGGTGGGCCGAGCCGGCGCTGCGCGCGATCCGCTGGGGTGGCCGCTTCGTCGTCGTGGGCTTCGCAGGC GGTGAGATCCCGCGGATCCCGCTGAACCTCGTGCTGCTGAAGAACATCACGGTGCGCGGGATCGAGCTGCGTACATGGTC CGTGCGGCTGCCTGAGGAGACGGCGCGGGCGCGCGAGGGGCTGGCGACACTGGTGGCGCAGGGGATGCGGCCGCTCGTGT CCGAGGTACACGACCTCGACGACGTGGCCGTCGCCCTGCAGCGCGTCGCCGACCGGGCGCCGACCGCCAAAGTCGTCATC CGCGTCGCGGACTGA
Upstream 100 bases:
>100_bases CCACGTACGGAGGTTCGATCATCAAGCGACCCGCTGAGAACCCAGGCAGGATCCGAGCCCGAGCCGCCTGCGGGCCCCGC CGCGCGGGCCGGGAGACGCG
Downstream 100 bases:
>100_bases CGGCGCCGCCCGCACCGCGAGAACTGCAACCGCGACAGCTTCGATCGCGAGAACTGCGACCGCGAGAACTTGGGCCGCGA GAACTTGGGCCGCGAGAACG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: ADH-HT [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MRAARVEAYGGPADVVIRDVPAPEATPGHVVVDVAAAALNFPDLLLIADRYQVSAPLPFTPGSEFAGRVAAVGDGVTGLA VGDPVHGSVFSGAMAEQVLAPTTAVSPIPAGLSMVEAAAFRVTYLTAYHCLVTIGELAPDQWVVVLGAAGGVGSAAVDIA VRLGARVIAAASSPERLAVCKELGAETCIDYTTEDLKLRIKEITGGGADLVVDPVGDRWAEPALRAIRWGGRFVVVGFAG GEIPRIPLNLVLLKNITVRGIELRTWSVRLPEETARAREGLATLVAQGMRPLVSEVHDLDDVAVALQRVADRAPTAKVVI RVAD
Sequences:
>Translated_324_residues MRAARVEAYGGPADVVIRDVPAPEATPGHVVVDVAAAALNFPDLLLIADRYQVSAPLPFTPGSEFAGRVAAVGDGVTGLA VGDPVHGSVFSGAMAEQVLAPTTAVSPIPAGLSMVEAAAFRVTYLTAYHCLVTIGELAPDQWVVVLGAAGGVGSAAVDIA VRLGARVIAAASSPERLAVCKELGAETCIDYTTEDLKLRIKEITGGGADLVVDPVGDRWAEPALRAIRWGGRFVVVGFAG GEIPRIPLNLVLLKNITVRGIELRTWSVRLPEETARAREGLATLVAQGMRPLVSEVHDLDDVAVALQRVADRAPTAKVVI RVAD >Mature_324_residues MRAARVEAYGGPADVVIRDVPAPEATPGHVVVDVAAAALNFPDLLLIADRYQVSAPLPFTPGSEFAGRVAAVGDGVTGLA VGDPVHGSVFSGAMAEQVLAPTTAVSPIPAGLSMVEAAAFRVTYLTAYHCLVTIGELAPDQWVVVLGAAGGVGSAAVDIA VRLGARVIAAASSPERLAVCKELGAETCIDYTTEDLKLRIKEITGGGADLVVDPVGDRWAEPALRAIRWGGRFVVVGFAG GEIPRIPLNLVLLKNITVRGIELRTWSVRLPEETARAREGLATLVAQGMRPLVSEVHDLDDVAVALQRVADRAPTAKVVI RVAD
Specific function: Thermophilic NAD(+)-dependent alcohol dehydrogenase. Bears mainly an ethanol-dehydrogenase activity [H]
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=26.6666666666667, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=26.6666666666667, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI18379349, Length=205, Percent_Identity=38.0487804878049, Blast_Score=118, Evalue=8e-27, Organism=Homo sapiens, GI194239674, Length=312, Percent_Identity=29.1666666666667, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI13236495, Length=312, Percent_Identity=29.1666666666667, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI24308257, Length=353, Percent_Identity=26.628895184136, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI194239676, Length=216, Percent_Identity=31.9444444444444, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI41872631, Length=319, Percent_Identity=29.7805642633229, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI28557745, Length=260, Percent_Identity=30.7692307692308, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI67078404, Length=325, Percent_Identity=28.9230769230769, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI67078406, Length=287, Percent_Identity=28.9198606271777, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI47519420, Length=334, Percent_Identity=26.0479041916168, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1790485, Length=300, Percent_Identity=31.6666666666667, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI1789651, Length=287, Percent_Identity=28.2229965156794, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17507255, Length=215, Percent_Identity=29.7674418604651, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17536829, Length=300, Percent_Identity=29.3333333333333, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562584, Length=345, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319520, Length=322, Percent_Identity=27.0186335403727, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6323961, Length=274, Percent_Identity=27.007299270073, Blast_Score=86, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6323729, Length=282, Percent_Identity=25.531914893617, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6319621, Length=273, Percent_Identity=26.7399267399267, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324486, Length=283, Percent_Identity=25.4416961130742, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI19920632, Length=311, Percent_Identity=28.6173633440514, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI221330659, Length=312, Percent_Identity=28.8461538461538, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24581345, Length=330, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 33708; Mature: 33708
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAARVEAYGGPADVVIRDVPAPEATPGHVVVDVAAAALNFPDLLLIADRYQVSAPLPFT CCCCEEECCCCCCEEEEEECCCCCCCCCEEEEEEHHHHCCCCCEEEEECCEEECCCCCCC PGSEFAGRVAAVGDGVTGLAVGDPVHGSVFSGAMAEQVLAPTTAVSPIPAGLSMVEAAAF CCHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH RVTYLTAYHCLVTIGELAPDQWVVVLGAAGGVGSAAVDIAVRLGARVIAAASSPERLAVC HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHH KELGAETCIDYTTEDLKLRIKEITGGGADLVVDPVGDRWAEPALRAIRWGGRFVVVGFAG HHCCHHHHHCCCCHHHEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECC GEIPRIPLNLVLLKNITVRGIELRTWSVRLPEETARAREGLATLVAQGMRPLVSEVHDLD CCCCCCCEEEEEEECCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH DVAVALQRVADRAPTAKVVIRVAD HHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure MRAARVEAYGGPADVVIRDVPAPEATPGHVVVDVAAAALNFPDLLLIADRYQVSAPLPFT CCCCEEECCCCCCEEEEEECCCCCCCCCEEEEEEHHHHCCCCCEEEEECCEEECCCCCCC PGSEFAGRVAAVGDGVTGLAVGDPVHGSVFSGAMAEQVLAPTTAVSPIPAGLSMVEAAAF CCHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH RVTYLTAYHCLVTIGELAPDQWVVVLGAAGGVGSAAVDIAVRLGARVIAAASSPERLAVC HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHH KELGAETCIDYTTEDLKLRIKEITGGGADLVVDPVGDRWAEPALRAIRWGGRFVVVGFAG HHCCHHHHHCCCCHHHEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECC GEIPRIPLNLVLLKNITVRGIELRTWSVRLPEETARAREGLATLVAQGMRPLVSEVHDLD CCCCCCCEEEEEEECCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH DVAVALQRVADRAPTAKVVIRVAD HHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8020473 [H]