| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316265
Identifier: 158316265
GI number: 158316265
Start: 5357224
End: 5357619
Strand: Reverse
Name: 158316265
Synonym: Franean1_4490
Alternate gene names: NA
Gene position: 5357619-5357224 (Counterclockwise)
Preceding gene: 158316266
Following gene: 158316264
Centisome position: 59.65
GC content: 68.94
Gene sequence:
>396_bases GTGTACCAGGTCATGATGCTGAGCAAGCGGCGGCCCGGCTTATCCATGGCCGAGTTCGTCGAGAAGTACGAAACGCGGCA TGCGCCCTACGCGGCGGAGCAGATGCCGACCGCCCGGCGCTATGTGCGGCGGTACTTCGGACCGCTCAGCACCGCCGACC AGCCCGACGATGAGCGGGAGTTCGACGTCGCGACCGAGATCTGGTTCGACGACCGTGCCGCCTACGAGCGGGCGATGGAG CGGTTCGCCGATCCGGTGGTCGCCGCCCGGCTCGCGCAGGACGCGCAGGAGCTGTTCGATCCCGGCCGCAGCACGCTACG CGTCCATGTCGAAGAACAGGCGAGTCAGCCCGGCGGTGGCGATGGTCCGGTGGGCGCCGACCAGGGGAGCTTCTGA
Upstream 100 bases:
>100_bases TCCGTCGACATTCCGGCGGGGTCCGAACAGTTGGCACGCGACGCGATCGCTGCGTGCCCGGAGCGGGTTCTGCGGGAGAC ACCGTGAGGGGACACCGCCG
Downstream 100 bases:
>100_bases TGGCCGGGCGAGTCGCCGGGAAGGTCGCGCTGATCACCGGGGCGGCGCGCGGGCAGGGCCGCAGCCACGCGGTTCGGCTC GCGCAGGAGGGGGCCGACAT
Product: ethyl tert-butyl ether degradation EthD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MYQVMMLSKRRPGLSMAEFVEKYETRHAPYAAEQMPTARRYVRRYFGPLSTADQPDDEREFDVATEIWFDDRAAYERAME RFADPVVAARLAQDAQELFDPGRSTLRVHVEEQASQPGGGDGPVGADQGSF
Sequences:
>Translated_131_residues MYQVMMLSKRRPGLSMAEFVEKYETRHAPYAAEQMPTARRYVRRYFGPLSTADQPDDEREFDVATEIWFDDRAAYERAME RFADPVVAARLAQDAQELFDPGRSTLRVHVEEQASQPGGGDGPVGADQGSF >Mature_131_residues MYQVMMLSKRRPGLSMAEFVEKYETRHAPYAAEQMPTARRYVRRYFGPLSTADQPDDEREFDVATEIWFDDRAAYERAME RFADPVVAARLAQDAQELFDPGRSTLRVHVEEQASQPGGGDGPVGADQGSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14867; Mature: 14867
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQVMMLSKRRPGLSMAEFVEKYETRHAPYAAEQMPTARRYVRRYFGPLSTADQPDDERE CCCEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCH FDVATEIWFDDRAAYERAMERFADPVVAARLAQDAQELFDPGRSTLRVHVEEQASQPGGG HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHCCCCCCC DGPVGADQGSF CCCCCCCCCCC >Mature Secondary Structure MYQVMMLSKRRPGLSMAEFVEKYETRHAPYAAEQMPTARRYVRRYFGPLSTADQPDDERE CCCEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCH FDVATEIWFDDRAAYERAMERFADPVVAARLAQDAQELFDPGRSTLRVHVEEQASQPGGG HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHCCCCCCC DGPVGADQGSF CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA