| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is CYP127A1 [H]
Identifier: 158316266
GI number: 158316266
Start: 5357824
End: 5359089
Strand: Reverse
Name: CYP127A1 [H]
Synonym: Franean1_4491
Alternate gene names: 158316266
Gene position: 5359089-5357824 (Counterclockwise)
Preceding gene: 158316267
Following gene: 158316265
Centisome position: 59.66
GC content: 66.9
Gene sequence:
>1266_bases ATGTCCGTTGACGACACCGAGGCGTCCGCGCCCACGACCCAGCGCGGGTACGCCACGGCCCCCACGCTCGCGGGGTTCTC GCACGCGGCGAACGAGCGTCTCAATGCCGACCCGTGGGGCGAGCTCGACCGGCTCCGCGACGAGTCGCCGACATTCCGTA GCGACATGCCGAATCCTCTCGTCCCCGGCGCGTCGCTGTGGTATCTCCTCGACTACGAGAGCGTCTACACCGCGCTGCGT GACTGGGAGACCTTCTCCAACGTGGGATCGGCGCACCCGTTCTCCGACAGCGACCCGTACAGCATGATCCCCGGCGAGCT GGACCCGCCGGACCACACCAAGTTCCGGCGGCCGCTGAACGCCCACTTCTCGCCCGGCGCGATCCGCGCGCTCGAGCCGG ATATCCGCCGGACGGCCGTTGAGCTCATCGAGTCGTTCAAGGATTCCGGCCAGTGCGACTTCGTCACCGACTTCGCGCTG CACTTTCCTACCCGGGTCTTCGAGCGGATGTTCGGCGTCCCGCTCGAGGATCACGACCAGCTCACCGCGTGGGTGCATAC CTTCGGCCAGCAGATGGCGACACAGACCGCGATCGACAAGGCCGTCGCCGCCGAGCAGGAGGTGCTGGCCTACCTGGGGA AGAAGCTGGACGAGCGCGAGCAGTCCCCCAGGGAGGACCTGCTCGGCGCGATCGCCTTCATGGAAGTCGACGGCGCCCGG ATCAGTCGCAAGGAGCAGGTGGCGGTCGCCTACCTGATGTTCCAGGCGGGTATGGACACGGTGGCGAGCCAGCTGGGCTG GTCCTTCCGCCACCTCGCCGAGAACGAGGTCGACCGGCAGGCGATCCTCGCCGACCCGAAGCTGATTCCCTCGACGGTGG AGGAGCTCCTGCGCTCCTACGACATCCTCTCGCACACCATGATCGTCGCCAAGGATGTCGAGTTCAACGGCTGCCCGATG AAGAAAGGCGACCGGGTGGTCACCATGATCTCGGCGGCGAACCGGGACCCGAACGAGTTCCCGGACCCGGACACCTTCGA CGTCTCCCGCAAGCCGAACCGGCACATGGCCTTCGGGGTGGGGCCGCACCGCTGCATCGGTGCGCACCTGGCCCGGATCG AGCTGAACATCGCGCTGGAGGAGTGGCACCAGCGGATCCCGAATTACAAGGTGGCCGAGGGCGCCGAGTTCGGCCAGTCC ATGAAATGGGCGGTCACCTCGATGGAATCGCTCCCGCTCGAATGGGATGTCGAGGCGGTGAACTGA
Upstream 100 bases:
>100_bases TATCTGCGTCATACTTGCGATACTCTATCCGTGAATAGTAGATCCATGGATATTTGCTGACGCGACTACTGTTAACCGCG GCGGCAGATGGGGAGTTCTG
Downstream 100 bases:
>100_bases TGCGGATCGTGGCGGAACGGGAGATGTGCAGCGGTCACACCCGGTGCGCGGCGGTGCTTCCGGGGGTTTTCGCGCTCGAT GACGACGGCTACCTGAACAT
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSVDDTEASAPTTQRGYATAPTLAGFSHAANERLNADPWGELDRLRDESPTFRSDMPNPLVPGASLWYLLDYESVYTALR DWETFSNVGSAHPFSDSDPYSMIPGELDPPDHTKFRRPLNAHFSPGAIRALEPDIRRTAVELIESFKDSGQCDFVTDFAL HFPTRVFERMFGVPLEDHDQLTAWVHTFGQQMATQTAIDKAVAAEQEVLAYLGKKLDEREQSPREDLLGAIAFMEVDGAR ISRKEQVAVAYLMFQAGMDTVASQLGWSFRHLAENEVDRQAILADPKLIPSTVEELLRSYDILSHTMIVAKDVEFNGCPM KKGDRVVTMISAANRDPNEFPDPDTFDVSRKPNRHMAFGVGPHRCIGAHLARIELNIALEEWHQRIPNYKVAEGAEFGQS MKWAVTSMESLPLEWDVEAVN
Sequences:
>Translated_421_residues MSVDDTEASAPTTQRGYATAPTLAGFSHAANERLNADPWGELDRLRDESPTFRSDMPNPLVPGASLWYLLDYESVYTALR DWETFSNVGSAHPFSDSDPYSMIPGELDPPDHTKFRRPLNAHFSPGAIRALEPDIRRTAVELIESFKDSGQCDFVTDFAL HFPTRVFERMFGVPLEDHDQLTAWVHTFGQQMATQTAIDKAVAAEQEVLAYLGKKLDEREQSPREDLLGAIAFMEVDGAR ISRKEQVAVAYLMFQAGMDTVASQLGWSFRHLAENEVDRQAILADPKLIPSTVEELLRSYDILSHTMIVAKDVEFNGCPM KKGDRVVTMISAANRDPNEFPDPDTFDVSRKPNRHMAFGVGPHRCIGAHLARIELNIALEEWHQRIPNYKVAEGAEFGQS MKWAVTSMESLPLEWDVEAVN >Mature_420_residues SVDDTEASAPTTQRGYATAPTLAGFSHAANERLNADPWGELDRLRDESPTFRSDMPNPLVPGASLWYLLDYESVYTALRD WETFSNVGSAHPFSDSDPYSMIPGELDPPDHTKFRRPLNAHFSPGAIRALEPDIRRTAVELIESFKDSGQCDFVTDFALH FPTRVFERMFGVPLEDHDQLTAWVHTFGQQMATQTAIDKAVAAEQEVLAYLGKKLDEREQSPREDLLGAIAFMEVDGARI SRKEQVAVAYLMFQAGMDTVASQLGWSFRHLAENEVDRQAILADPKLIPSTVEELLRSYDILSHTMIVAKDVEFNGCPMK KGDRVVTMISAANRDPNEFPDPDTFDVSRKPNRHMAFGVGPHRCIGAHLARIELNIALEEWHQRIPNYKVAEGAEFGQSM KWAVTSMESLPLEWDVEAVN
Specific function: Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17531287, Length=184, Percent_Identity=27.7173913043478, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21357631, Length=374, Percent_Identity=22.4598930481283, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 47227; Mature: 47096
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDDTEASAPTTQRGYATAPTLAGFSHAANERLNADPWGELDRLRDESPTFRSDMPNPL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHCCCCCC VPGASLWYLLDYESVYTALRDWETFSNVGSAHPFSDSDPYSMIPGELDPPDHTKFRRPLN CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC AHFSPGAIRALEPDIRRTAVELIESFKDSGQCDFVTDFALHFPTRVFERMFGVPLEDHDQ CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH LTAWVHTFGQQMATQTAIDKAVAAEQEVLAYLGKKLDEREQSPREDLLGAIAFMEVDGAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCH ISRKEQVAVAYLMFQAGMDTVASQLGWSFRHLAENEVDRQAILADPKLIPSTVEELLRSY HCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DILSHTMIVAKDVEFNGCPMKKGDRVVTMISAANRDPNEFPDPDTFDVSRKPNRHMAFGV HHHHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC GPHRCIGAHLARIELNIALEEWHQRIPNYKVAEGAEFGQSMKWAVTSMESLPLEWDVEAV CHHHHHHHHEEEEEEEEHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHCCCEEECEEC N C >Mature Secondary Structure SVDDTEASAPTTQRGYATAPTLAGFSHAANERLNADPWGELDRLRDESPTFRSDMPNPL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHCCCCCC VPGASLWYLLDYESVYTALRDWETFSNVGSAHPFSDSDPYSMIPGELDPPDHTKFRRPLN CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC AHFSPGAIRALEPDIRRTAVELIESFKDSGQCDFVTDFALHFPTRVFERMFGVPLEDHDQ CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH LTAWVHTFGQQMATQTAIDKAVAAEQEVLAYLGKKLDEREQSPREDLLGAIAFMEVDGAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCH ISRKEQVAVAYLMFQAGMDTVASQLGWSFRHLAENEVDRQAILADPKLIPSTVEELLRSY HCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DILSHTMIVAKDVEFNGCPMKKGDRVVTMISAANRDPNEFPDPDTFDVSRKPNRHMAFGV HHHHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC GPHRCIGAHLARIELNIALEEWHQRIPNYKVAEGAEFGQSMKWAVTSMESLPLEWDVEAV CHHHHHHHHEEEEEEEEHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHCCCEEECEEC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]