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The map label for this gene is yulF [H]

Identifier: 158316204

GI number: 158316204

Start: 5289507

End: 5290532

Strand: Reverse

Name: yulF [H]

Synonym: Franean1_4427

Alternate gene names: 158316204

Gene position: 5290532-5289507 (Counterclockwise)

Preceding gene: 158316205

Following gene: 158316203

Centisome position: 58.9

GC content: 69.4

Gene sequence:

>1026_bases
ATGATTCGTTGGGGTGTGGTGGGACCGGGCGAGATCGCAGCCGGGTTCGCGGAAGCAATGCGGTCGGTCGGCGACGGAGA
GATCGTCGCGGTGGCGTCACGCGCGGCTGAGCGCGCGACGGCCTTCGGCGACAGGTTCGGGATCCCGACCAGGTACGGCG
ACTACGCCGCGCTCGCCATCGACCCCGACGTTGACGTGGTCTACGTGGCAACCCCGCCGTCACGGCACGAGCAGGACACC
GTCGCCTTCCTGGAGGCCGGCAAGCACGTCCTGTGCGAGAAACCGTTCGCGCTCGACGCCCGACAGGCCCGGCGGATGGC
CGAACACGCCCGCGACCGCGGGCTGTTCCTGATGGAGGCGATCTGGAGTCGGTTCCTGCCGGCCTACCGCTCCCTGGTCG
ACGTGCTTGCCAGCGGACGCATCGGCGAACCGCTGCTGGTGGAGGCAGATTTCGGGATGCGGTGGCCGGTGCGCCCGGAG
CATCGCCTGTTCGACCCGGATCTGGGTGGCGGTGCTCTGCTCGACCTGGGCATCTACCCGATCCAGCTCTGCTCGCTCGT
GCTCGGCTCGGCCGAGCAGGTCGCCGCGGCCGGTGTCATCGGCGAGACCGGAGTCGACGAGCAGGTCGCGGCGGTGCTTT
GCCATCCTGGCGGCGCGCTTGGTGTGGTCAAAGCGGCGATCCGGGTGACCATGACGTGCGCGGCGCGCATCGCGGGCACC
GGCGGATCGATCGACCTCCCGGCGTTCATGCACTGCCCGAACGCCCTCACCGTCACCACCCGCCCCGGCAGCGCCGAACA
CATCGACGGCTCCTATGAGGGCAACGGGTTGCAGTTCGAGATCGCCGAAGTGCACCGCTGCCTCGCCGAAGGACTCGCCG
AGAGCCCGGTGATGCCACTGGACGAGACCATCGCCCTCGCATCCACCCTCGATGCCATCCGCGCCCAGGTACTCACGAGC
GCGGCGTGTTCGCGCTCGTCGGTTCCGGCCCATGTAGGAGCCTCCGACAGAAGGCGAGCCCGATGA

Upstream 100 bases:

>100_bases
TACACCCGAGCCCGCTCAGTCTGGCAACTCGTCGACGCGCTCGACACCATCCCAGCGAAATCGAAATAGCCCTCCCCCAA
ACCCGAAAAGGATGACCATC

Downstream 100 bases:

>100_bases
ACCGTTCCTCTTCACACCGTTCGCTGCTCGACTTCTACGCCGACCCCGACGCGGGCAGCTGGGATGAGGTCGGGTACGTC
CCCTATCCGCTCGGGCCCCC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MIRWGVVGPGEIAAGFAEAMRSVGDGEIVAVASRAAERATAFGDRFGIPTRYGDYAALAIDPDVDVVYVATPPSRHEQDT
VAFLEAGKHVLCEKPFALDARQARRMAEHARDRGLFLMEAIWSRFLPAYRSLVDVLASGRIGEPLLVEADFGMRWPVRPE
HRLFDPDLGGGALLDLGIYPIQLCSLVLGSAEQVAAAGVIGETGVDEQVAAVLCHPGGALGVVKAAIRVTMTCAARIAGT
GGSIDLPAFMHCPNALTVTTRPGSAEHIDGSYEGNGLQFEIAEVHRCLAEGLAESPVMPLDETIALASTLDAIRAQVLTS
AACSRSSVPAHVGASDRRRAR

Sequences:

>Translated_341_residues
MIRWGVVGPGEIAAGFAEAMRSVGDGEIVAVASRAAERATAFGDRFGIPTRYGDYAALAIDPDVDVVYVATPPSRHEQDT
VAFLEAGKHVLCEKPFALDARQARRMAEHARDRGLFLMEAIWSRFLPAYRSLVDVLASGRIGEPLLVEADFGMRWPVRPE
HRLFDPDLGGGALLDLGIYPIQLCSLVLGSAEQVAAAGVIGETGVDEQVAAVLCHPGGALGVVKAAIRVTMTCAARIAGT
GGSIDLPAFMHCPNALTVTTRPGSAEHIDGSYEGNGLQFEIAEVHRCLAEGLAESPVMPLDETIALASTLDAIRAQVLTS
AACSRSSVPAHVGASDRRRAR
>Mature_341_residues
MIRWGVVGPGEIAAGFAEAMRSVGDGEIVAVASRAAERATAFGDRFGIPTRYGDYAALAIDPDVDVVYVATPPSRHEQDT
VAFLEAGKHVLCEKPFALDARQARRMAEHARDRGLFLMEAIWSRFLPAYRSLVDVLASGRIGEPLLVEADFGMRWPVRPE
HRLFDPDLGGGALLDLGIYPIQLCSLVLGSAEQVAAAGVIGETGVDEQVAAVLCHPGGALGVVKAAIRVTMTCAARIAGT
GGSIDLPAFMHCPNALTVTTRPGSAEHIDGSYEGNGLQFEIAEVHRCLAEGLAESPVMPLDETIALASTLDAIRAQVLTS
AACSRSSVPAHVGASDRRRAR

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=325, Percent_Identity=38.4615384615385, Blast_Score=214, Evalue=1e-55,
Organism=Escherichia coli, GI145693182, Length=257, Percent_Identity=27.6264591439689, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1787574, Length=194, Percent_Identity=31.9587628865979, Blast_Score=84, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24581117, Length=327, Percent_Identity=33.0275229357798, Blast_Score=186, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24581115, Length=325, Percent_Identity=34.4615384615385, Blast_Score=157, Evalue=7e-39,
Organism=Drosophila melanogaster, GI24584727, Length=337, Percent_Identity=29.9703264094956, Blast_Score=142, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36034; Mature: 36034

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRWGVVGPGEIAAGFAEAMRSVGDGEIVAVASRAAERATAFGDRFGIPTRYGDYAALAI
CEEECCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
DPDVDVVYVATPPSRHEQDTVAFLEAGKHVLCEKPFALDARQARRMAEHARDRGLFLMEA
CCCCCEEEEECCCCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCHHHHHH
IWSRFLPAYRSLVDVLASGRIGEPLLVEADFGMRWPVRPEHRLFDPDLGGGALLDLGIYP
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCHH
IQLCSLVLGSAEQVAAAGVIGETGVDEQVAAVLCHPGGALGVVKAAIRVTMTCAARIAGT
HHHHHHHHCCHHHHHHHCCCCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
GGSIDLPAFMHCPNALTVTTRPGSAEHIDGSYEGNGLQFEIAEVHRCLAEGLAESPVMPL
CCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCC
DETIALASTLDAIRAQVLTSAACSRSSVPAHVGASDRRRAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRWGVVGPGEIAAGFAEAMRSVGDGEIVAVASRAAERATAFGDRFGIPTRYGDYAALAI
CEEECCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
DPDVDVVYVATPPSRHEQDTVAFLEAGKHVLCEKPFALDARQARRMAEHARDRGLFLMEA
CCCCCEEEEECCCCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCHHHHHH
IWSRFLPAYRSLVDVLASGRIGEPLLVEADFGMRWPVRPEHRLFDPDLGGGALLDLGIYP
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCHH
IQLCSLVLGSAEQVAAAGVIGETGVDEQVAAVLCHPGGALGVVKAAIRVTMTCAARIAGT
HHHHHHHHCCHHHHHHHCCCCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
GGSIDLPAFMHCPNALTVTTRPGSAEHIDGSYEGNGLQFEIAEVHRCLAEGLAESPVMPL
CCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCC
DETIALASTLDAIRAQVLTSAACSRSSVPAHVGASDRRRAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]