Click here to switch to the map view.

The map label for this gene is fixC [C]

Identifier: 158316203

GI number: 158316203

Start: 5287771

End: 5289510

Strand: Reverse

Name: fixC [C]

Synonym: Franean1_4426

Alternate gene names: 158316203

Gene position: 5289510-5287771 (Counterclockwise)

Preceding gene: 158316204

Following gene: 158316202

Centisome position: 58.89

GC content: 69.66

Gene sequence:

>1740_bases
ATGAACCGTTCCTCTTCACACCGTTCGCTGCTCGACTTCTACGCCGACCCCGACGCGGGCAGCTGGGATGAGGTCGGGTA
CGTCCCCTATCCGCTCGGGCCCCCGGCCGTCGACACACCGGTCGTGGCCCGCCTGCGGACGCGGGCGTTGTCTGACCTGC
GTGAACGTTACGACGCGGTCGTTGTGGGAAGCGGAGCCGGTGGCGGTGTCGCCGCATTCGTGCTCGCGTCCGCGGGAGCA
TCCGTGCTCGTCGTCGAACGCGGCCAGTGGTACGGCGCGGGCGACCTCGCTACCGACCATATCCGCAACCACCGGTTCTT
CCTCGGGGGCGACCTCGACACACCCCCCGGGCACCCCCGGGCAGTCCTCGGCGACGACGGTGAGATCGCGGTCGAGTCCG
AGGACGGCCGCTACCACCACAACGCAATCACCGTCGGAGGTGGCACCCGGTTCTTCGGCGCCCAGGCCTGGCGGTTCCGG
CCCGAGGACTTCCGGATGGCCTCCCTGTACGGCGTCCCAGAAGGATCCGCGCTCGCGGACTGGCCGATCACCTACGGTGA
CCTCGAACCGTTCTACGACCAGGTGGAATGGGAACTCGGCGTGGCCGGCCGCCCGCACCCCGATGACGCGCACCGCAAAC
GCGACTACCCGATGCCCCCCTTCCCGCCGAGCGCCCTGGCTGCCGCGCTCGCGGCCGGCGCCGACAGGCTCGGATGGCCG
ACGGGACCAACCCCGTTGCTGCTGAACACCCGACCCCGCGCTGGCCGGGCCGCATGTATCCGCTGCGGGATGTGTGTCGG
CTTCACCTGCCCCGTCGACGCCCGCAACGGCACCCACAGCACCGTCCTGCCCCGCGCCGTCGACCTCGGCGCCGACCTGA
CTGTTGGCGCGCAGGTCACGCGAGTATCCGCCGCCGGCGACGTCGAGATCGCCGCCGGCGGCGCGTCACGCGTCATCCGC
GCCGGAACGGTCGTGCTCGCCGGCGGCGCGGTCGAGACCGCCAGGCTGCTCCAGCTCAGCGGCCTGGGCAACGACTGGGT
CGGCGACTGCCTCCAAGGACACCTCTACGCAGGCGCGCTCGGCGTGTTCGACGAGCCGGTCCACGACGGACTCGGACCAG
GCCCGTCCATCGCGACCAGACGCTTCGCCCACGGAAACGACAGCGTCGTCGGTGGAGGCCTGCTCGGGGATGACTTCGTC
AGGCTCCCCGTCATGCACTACTTCATGACCCGCCTCATGGGACTTTCCCCCGACGTCAGCCAGGCGGACGTGCGTCGCGC
CATGGCGGAGAGTTACCGCCACACCGGCATCGTCTCCGGGCCGGTCCAGGAAGTGACGATTCGCGGCGCACGCGTCCGGT
TGGCGTCAGGCGTGACCGACCACCTCGGCCTCCCTGTGGCCCGACTCGAAGGTTTCCATCATCCCGAGGACCTCCGAACC
GTCGCGTTCCTCACCGACCGAGCCGAGGAATGGCTACACGCATCCGGCGCTCGCCAAACCTGGCAGATAGGCCCGATGAA
GGAAACGACACTATCCGCGGGCCAGCACCAGGCAGGCACCGCGCGCATGTCCGACTCACCCCGCCACGGCGCAACCGACC
CGTTCGGCAAAGTCTGGGGAACAGATCGCGTATACGTCGCCGATGCAAGCCTCCACGTCACCAATGGCGGCGCAAACCCC
GTCCTCACCATCATGGCCCTCGCCTGGCGAACCGCAGCACACATCGCCGCCAGCGGATAA

Upstream 100 bases:

>100_bases
CCACCCTCGATGCCATCCGCGCCCAGGTACTCACGAGCGCGGCGTGTTCGCGCTCGTCGGTTCCGGCCCATGTAGGAGCC
TCCGACAGAAGGCGAGCCCG

Downstream 100 bases:

>100_bases
CCACGAGCAACGCGCAACCAGAATACACGACAGTCGAACGCGGCTGATAATGAAGGAGATCGATGACCCCGGCGAACACC
GACGTGTGCCCAACGATCCG

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: GA 2-DH dehydrogenase subunit; GADH dehydrogenase subunit [H]

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MNRSSSHRSLLDFYADPDAGSWDEVGYVPYPLGPPAVDTPVVARLRTRALSDLRERYDAVVVGSGAGGGVAAFVLASAGA
SVLVVERGQWYGAGDLATDHIRNHRFFLGGDLDTPPGHPRAVLGDDGEIAVESEDGRYHHNAITVGGGTRFFGAQAWRFR
PEDFRMASLYGVPEGSALADWPITYGDLEPFYDQVEWELGVAGRPHPDDAHRKRDYPMPPFPPSALAAALAAGADRLGWP
TGPTPLLLNTRPRAGRAACIRCGMCVGFTCPVDARNGTHSTVLPRAVDLGADLTVGAQVTRVSAAGDVEIAAGGASRVIR
AGTVVLAGGAVETARLLQLSGLGNDWVGDCLQGHLYAGALGVFDEPVHDGLGPGPSIATRRFAHGNDSVVGGGLLGDDFV
RLPVMHYFMTRLMGLSPDVSQADVRRAMAESYRHTGIVSGPVQEVTIRGARVRLASGVTDHLGLPVARLEGFHHPEDLRT
VAFLTDRAEEWLHASGARQTWQIGPMKETTLSAGQHQAGTARMSDSPRHGATDPFGKVWGTDRVYVADASLHVTNGGANP
VLTIMALAWRTAAHIAASG

Sequences:

>Translated_579_residues
MNRSSSHRSLLDFYADPDAGSWDEVGYVPYPLGPPAVDTPVVARLRTRALSDLRERYDAVVVGSGAGGGVAAFVLASAGA
SVLVVERGQWYGAGDLATDHIRNHRFFLGGDLDTPPGHPRAVLGDDGEIAVESEDGRYHHNAITVGGGTRFFGAQAWRFR
PEDFRMASLYGVPEGSALADWPITYGDLEPFYDQVEWELGVAGRPHPDDAHRKRDYPMPPFPPSALAAALAAGADRLGWP
TGPTPLLLNTRPRAGRAACIRCGMCVGFTCPVDARNGTHSTVLPRAVDLGADLTVGAQVTRVSAAGDVEIAAGGASRVIR
AGTVVLAGGAVETARLLQLSGLGNDWVGDCLQGHLYAGALGVFDEPVHDGLGPGPSIATRRFAHGNDSVVGGGLLGDDFV
RLPVMHYFMTRLMGLSPDVSQADVRRAMAESYRHTGIVSGPVQEVTIRGARVRLASGVTDHLGLPVARLEGFHHPEDLRT
VAFLTDRAEEWLHASGARQTWQIGPMKETTLSAGQHQAGTARMSDSPRHGATDPFGKVWGTDRVYVADASLHVTNGGANP
VLTIMALAWRTAAHIAASG
>Mature_579_residues
MNRSSSHRSLLDFYADPDAGSWDEVGYVPYPLGPPAVDTPVVARLRTRALSDLRERYDAVVVGSGAGGGVAAFVLASAGA
SVLVVERGQWYGAGDLATDHIRNHRFFLGGDLDTPPGHPRAVLGDDGEIAVESEDGRYHHNAITVGGGTRFFGAQAWRFR
PEDFRMASLYGVPEGSALADWPITYGDLEPFYDQVEWELGVAGRPHPDDAHRKRDYPMPPFPPSALAAALAAGADRLGWP
TGPTPLLLNTRPRAGRAACIRCGMCVGFTCPVDARNGTHSTVLPRAVDLGADLTVGAQVTRVSAAGDVEIAAGGASRVIR
AGTVVLAGGAVETARLLQLSGLGNDWVGDCLQGHLYAGALGVFDEPVHDGLGPGPSIATRRFAHGNDSVVGGGLLGDDFV
RLPVMHYFMTRLMGLSPDVSQADVRRAMAESYRHTGIVSGPVQEVTIRGARVRLASGVTDHLGLPVARLEGFHHPEDLRT
VAFLTDRAEEWLHASGARQTWQIGPMKETTLSAGQHQAGTARMSDSPRHGATDPFGKVWGTDRVYVADASLHVTNGGANP
VLTIMALAWRTAAHIAASG

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate. This subunit functions as the dehydrogenase [H]

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 61315; Mature: 61315

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSSSHRSLLDFYADPDAGSWDEVGYVPYPLGPPAVDTPVVARLRTRALSDLRERYDAV
CCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE
VVGSGAGGGVAAFVLASAGASVLVVERGQWYGAGDLATDHIRNHRFFLGGDLDTPPGHPR
EEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCC
AVLGDDGEIAVESEDGRYHHNAITVGGGTRFFGAQAWRFRPEDFRMASLYGVPEGSALAD
EEECCCCCEEEECCCCEEECCEEEECCCCEECCCCEEECCCCCCEEEEEECCCCCCCEEC
WPITYGDLEPFYDQVEWELGVAGRPHPDDAHRKRDYPMPPFPPSALAAALAAGADRLGWP
CCCCCCCCCHHHHHHEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHCCCC
TGPTPLLLNTRPRAGRAACIRCGMCVGFTCPVDARNGTHSTVLPRAVDLGADLTVGAQVT
CCCCCEEEECCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCEEECCEEE
RVSAAGDVEIAAGGASRVIRAGTVVLAGGAVETARLLQLSGLGNDWVGDCLQGHLYAGAL
EEECCCCEEEECCCHHHEEEECEEEEECCCHHHHHHHEECCCCCHHHHHHHHCCHHCCCC
GVFDEPVHDGLGPGPSIATRRFAHGNDSVVGGGLLGDDFVRLPVMHYFMTRLMGLSPDVS
CCCCCHHHHCCCCCCCHHHEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCC
QADVRRAMAESYRHTGIVSGPVQEVTIRGARVRLASGVTDHLGLPVARLEGFHHPEDLRT
HHHHHHHHHHHHHHCCCCCCCHHEEEECCEEEEEECCCHHHHCCCHHHHCCCCCHHHHHH
VAFLTDRAEEWLHASGARQTWQIGPMKETTLSAGQHQAGTARMSDSPRHGATDPFGKVWG
HHHHHHHHHHHHHCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
TDRVYVADASLHVTNGGANPVLTIMALAWRTAAHIAASG
CCEEEEEECEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRSSSHRSLLDFYADPDAGSWDEVGYVPYPLGPPAVDTPVVARLRTRALSDLRERYDAV
CCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE
VVGSGAGGGVAAFVLASAGASVLVVERGQWYGAGDLATDHIRNHRFFLGGDLDTPPGHPR
EEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCC
AVLGDDGEIAVESEDGRYHHNAITVGGGTRFFGAQAWRFRPEDFRMASLYGVPEGSALAD
EEECCCCCEEEECCCCEEECCEEEECCCCEECCCCEEECCCCCCEEEEEECCCCCCCEEC
WPITYGDLEPFYDQVEWELGVAGRPHPDDAHRKRDYPMPPFPPSALAAALAAGADRLGWP
CCCCCCCCCHHHHHHEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHCCCC
TGPTPLLLNTRPRAGRAACIRCGMCVGFTCPVDARNGTHSTVLPRAVDLGADLTVGAQVT
CCCCCEEEECCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCEEECCEEE
RVSAAGDVEIAAGGASRVIRAGTVVLAGGAVETARLLQLSGLGNDWVGDCLQGHLYAGAL
EEECCCCEEEECCCHHHEEEECEEEEECCCHHHHHHHEECCCCCHHHHHHHHCCHHCCCC
GVFDEPVHDGLGPGPSIATRRFAHGNDSVVGGGLLGDDFVRLPVMHYFMTRLMGLSPDVS
CCCCCHHHHCCCCCCCHHHEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCC
QADVRRAMAESYRHTGIVSGPVQEVTIRGARVRLASGVTDHLGLPVARLEGFHHPEDLRT
HHHHHHHHHHHHHHCCCCCCCHHEEEECCEEEEEECCCHHHHCCCHHHHCCCCCHHHHHH
VAFLTDRAEEWLHASGARQTWQIGPMKETTLSAGQHQAGTARMSDSPRHGATDPFGKVWG
HHHHHHHHHHHHHCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
TDRVYVADASLHVTNGGANPVLTIMALAWRTAAHIAASG
CCEEEEEECEEEEECCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]