| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316205
Identifier: 158316205
GI number: 158316205
Start: 5290538
End: 5291152
Strand: Reverse
Name: 158316205
Synonym: Franean1_4428
Alternate gene names: NA
Gene position: 5291152-5290538 (Counterclockwise)
Preceding gene: 158316208
Following gene: 158316204
Centisome position: 58.91
GC content: 65.37
Gene sequence:
>615_bases GTGCACTCTCCCGCAGGTGGCGTTCCATGTCCGCGAGCAGGTCGAGGGCCGTCAGGTGGCCCGACCGTCAGGACCCTCGC CACCCGGCACGACAACATCGCCCCGCAGGGGAACTTCGGTGGCGTGCTCCCGACATGGAAGCAGCTGAGCCCCGACGACG GCACCTACGCGGCGCTCTGCCCATTCGGGTGGACGACCTACAAGGCCGGCAACCCCGCCGGTCCACCCGTCATGGTGAAC ACAGACCTGAAGCACTTCCCGATGGACTACATCCAGCCACCCGGCCGCTACATCCCGGAAATCGGTGACGTGTGGCCCGG CACCACGTACATGGCCACGGCCGCCGCTGTTCACATCGGTCACAGCACCGGCGACGAGGCGCCCGTCGCCAAGGCCCTGA AAATGAGTGAAGCCGTGGCGAACCAGATCTTCGACGAAGGCGAACGCTCGACCAAGGGCTACGCCTTCGGCACCGGAATC CTGGTTCGTGGACGAGGTCACGATCTGCCGGTACACCGCCTACACCCGAGCCCGCTCAGTCTGGCAACTCGTCGACGCGC TCGACACCATCCCAGCGAAATCGAAATAGCCCTCCCCCAAACCCGAAAAGGATGA
Upstream 100 bases:
>100_bases TATCCCGCTCGGCGGCGTCGGCTCGTTCTACTACAACCTGTTCGGGACCTTCGGGGCTGTGGAACATGAGTAGCTCGCAG TCGTCGAACTTCTGGGAGAT
Downstream 100 bases:
>100_bases CCATCATGATTCGTTGGGGTGTGGTGGGACCGGGCGAGATCGCAGCCGGGTTCGCGGAAGCAATGCGGTCGGTCGGCGAC GGAGAGATCGTCGCGGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MHSPAGGVPCPRAGRGPSGGPTVRTLATRHDNIAPQGNFGGVLPTWKQLSPDDGTYAALCPFGWTTYKAGNPAGPPVMVN TDLKHFPMDYIQPPGRYIPEIGDVWPGTTYMATAAAVHIGHSTGDEAPVAKALKMSEAVANQIFDEGERSTKGYAFGTGI LVRGRGHDLPVHRLHPSPLSLATRRRARHHPSEIEIALPQTRKG
Sequences:
>Translated_204_residues MHSPAGGVPCPRAGRGPSGGPTVRTLATRHDNIAPQGNFGGVLPTWKQLSPDDGTYAALCPFGWTTYKAGNPAGPPVMVN TDLKHFPMDYIQPPGRYIPEIGDVWPGTTYMATAAAVHIGHSTGDEAPVAKALKMSEAVANQIFDEGERSTKGYAFGTGI LVRGRGHDLPVHRLHPSPLSLATRRRARHHPSEIEIALPQTRKG >Mature_204_residues MHSPAGGVPCPRAGRGPSGGPTVRTLATRHDNIAPQGNFGGVLPTWKQLSPDDGTYAALCPFGWTTYKAGNPAGPPVMVN TDLKHFPMDYIQPPGRYIPEIGDVWPGTTYMATAAAVHIGHSTGDEAPVAKALKMSEAVANQIFDEGERSTKGYAFGTGI LVRGRGHDLPVHRLHPSPLSLATRRRARHHPSEIEIALPQTRKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21781; Mature: 21781
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSPAGGVPCPRAGRGPSGGPTVRTLATRHDNIAPQGNFGGVLPTWKQLSPDDGTYAALC CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEC PFGWTTYKAGNPAGPPVMVNTDLKHFPMDYIQPPGRYIPEIGDVWPGTTYMATAAAVHIG CCCCEEECCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHEEEEC HSTGDEAPVAKALKMSEAVANQIFDEGERSTKGYAFGTGILVRGRGHDLPVHRLHPSPLS CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECEEEEECCCCCCCCEEECCCCHH LATRRRARHHPSEIEIALPQTRKG HHHHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure MHSPAGGVPCPRAGRGPSGGPTVRTLATRHDNIAPQGNFGGVLPTWKQLSPDDGTYAALC CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEC PFGWTTYKAGNPAGPPVMVNTDLKHFPMDYIQPPGRYIPEIGDVWPGTTYMATAAAVHIG CCCCEEECCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHEEEEC HSTGDEAPVAKALKMSEAVANQIFDEGERSTKGYAFGTGILVRGRGHDLPVHRLHPSPLS CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECEEEEECCCCCCCCEEECCCCHH LATRRRARHHPSEIEIALPQTRKG HHHHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA