| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is menB [C]
Identifier: 158316079
GI number: 158316079
Start: 5135110
End: 5135901
Strand: Reverse
Name: menB [C]
Synonym: Franean1_4297
Alternate gene names: 158316079
Gene position: 5135901-5135110 (Counterclockwise)
Preceding gene: 158316080
Following gene: 158316078
Centisome position: 57.18
GC content: 68.06
Gene sequence:
>792_bases TTGTTAGTCCTATACGACGTCGCCGACGGGATCGCGACGATCACGCTCAACCGCCCCGAGGTCGCGAACGCGCAGAACGG ACCGCTCCTCGAGGAGCTCGACGCGGCGTGGACGAAGGCGGCGGCCGACAAGGACGTGGCGGTGATCGTGCTGCGCGCGG AGGGGAAGCACTTCTCCGCCGGGCACGACCTGAAGTCCGGTCAGCCGCTCCCCGAGAAAATCACCCTGGAGATGCTCTAC GAGCTGGAGGCACGGCGCTACCTGGAGTTCTCGCTGCGGTGGCGCAACGTTCCCAAGCCGTCGATCGCGGCGGTGCAGGG GCGCTGCATCTCGGGCGGGCTGCTGCTGTGCTGGCCGTGCGACCTGATCATCGCGGCCGAGGACGCGCTGTTCTCCGACC CCGTCGTCGCCATGGGCATAGGCGGTGTCGAGTACCACGGGCACACCTGGGAGCTCGGCCCGCGCAAGGCCAAGGAGATC CTCTTCACCGGGCGCGCGGTGACGGCCTCCGAGGCCGAGAAGATCGGCATGGTCAACAAGGTGGTGCCCCGCGACCAGCT CGACACCGAGACCCGCGCGCTGGCCCAGCACATCGCGACGATGCCCAGCTTCGGGCTCCGGCAGGCCAAGCGCGCGGTCA ACCAGACCCTCGACGTGCAGGGCTTCTACGCCGCGATCCAGTCGGTGTTCGACGTCCACCAGACCGGGCACGGCAACGCG CTGAGCGTCAGCGGATGGCCGGTCCTGGTCAACCTGGACCAGATGAAGTCAGCGATCAAGAAGGCCGACTAG
Upstream 100 bases:
>100_bases AGGTCCTTCGCCGGGACCATCGCCGGTGGCACCTCGGAGATCCAGCGCACGATCGTCGCCGAGCGTGTACTCGGTCTGCC GCGAAGCTGAGGAGCCAGCC
Downstream 100 bases:
>100_bases GCCCGAGACACAGCCGACGGCGGCGGGCGGGGGCGCGTGACGGCCCCGCCGGCCGCCTTTAGCCGCGCGTCGCCCGCCGA CGCAGGCACAGCCCGGGAGG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLVLYDVADGIATITLNRPEVANAQNGPLLEELDAAWTKAAADKDVAVIVLRAEGKHFSAGHDLKSGQPLPEKITLEMLY ELEARRYLEFSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVAMGIGGVEYHGHTWELGPRKAKEI LFTGRAVTASEAEKIGMVNKVVPRDQLDTETRALAQHIATMPSFGLRQAKRAVNQTLDVQGFYAAIQSVFDVHQTGHGNA LSVSGWPVLVNLDQMKSAIKKAD
Sequences:
>Translated_263_residues MLVLYDVADGIATITLNRPEVANAQNGPLLEELDAAWTKAAADKDVAVIVLRAEGKHFSAGHDLKSGQPLPEKITLEMLY ELEARRYLEFSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVAMGIGGVEYHGHTWELGPRKAKEI LFTGRAVTASEAEKIGMVNKVVPRDQLDTETRALAQHIATMPSFGLRQAKRAVNQTLDVQGFYAAIQSVFDVHQTGHGNA LSVSGWPVLVNLDQMKSAIKKAD >Mature_263_residues MLVLYDVADGIATITLNRPEVANAQNGPLLEELDAAWTKAAADKDVAVIVLRAEGKHFSAGHDLKSGQPLPEKITLEMLY ELEARRYLEFSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVAMGIGGVEYHGHTWELGPRKAKEI LFTGRAVTASEAEKIGMVNKVVPRDQLDTETRALAQHIATMPSFGLRQAKRAVNQTLDVQGFYAAIQSVFDVHQTGHGNA LSVSGWPVLVNLDQMKSAIKKAD
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=213, Percent_Identity=31.924882629108, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI31542718, Length=231, Percent_Identity=32.034632034632, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI45643119, Length=209, Percent_Identity=30.1435406698565, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI260275230, Length=209, Percent_Identity=30.1435406698565, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI260274832, Length=209, Percent_Identity=30.1435406698565, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI70995211, Length=186, Percent_Identity=31.7204301075269, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI68989263, Length=222, Percent_Identity=28.3783783783784, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1788597, Length=215, Percent_Identity=35.3488372093023, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1787659, Length=210, Percent_Identity=30.952380952381, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787660, Length=227, Percent_Identity=31.7180616740088, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI87082183, Length=195, Percent_Identity=30.2564102564103, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI221142681, Length=232, Percent_Identity=31.0344827586207, Blast_Score=67, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17554946, Length=213, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI25145438, Length=246, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17535521, Length=203, Percent_Identity=24.6305418719212, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17549921, Length=218, Percent_Identity=24.3119266055046, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17540714, Length=216, Percent_Identity=25.462962962963, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17560910, Length=210, Percent_Identity=29.0476190476191, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI20129971, Length=213, Percent_Identity=36.150234741784, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI24653477, Length=213, Percent_Identity=36.150234741784, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI24653139, Length=220, Percent_Identity=30.9090909090909, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI19920382, Length=223, Percent_Identity=29.5964125560538, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI19922422, Length=198, Percent_Identity=30.3030303030303, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI21357171, Length=235, Percent_Identity=27.6595744680851, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24650670, Length=230, Percent_Identity=29.5652173913043, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28635; Mature: 28635
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLYDVADGIATITLNRPEVANAQNGPLLEELDAAWTKAAADKDVAVIVLRAEGKHFSA CEEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC GHDLKSGQPLPEKITLEMLYELEARRYLEFSLRWRNVPKPSIAAVQGRCISGGLLLCWPC CCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHCCEEECCCEEEEECC DLIIAAEDALFSDPVVAMGIGGVEYHGHTWELGPRKAKEILFTGRAVTASEAEKIGMVNK CEEEEECCCCCCCCEEEEECCCEEECCCEECCCCHHHHHHEEECCEECHHHHHHHCHHHH VVPRDQLDTETRALAQHIATMPSFGLRQAKRAVNQTLDVQGFYAAIQSVFDVHQTGHGNA CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCE LSVSGWPVLVNLDQMKSAIKKAD EEECCCEEEEEHHHHHHHHHCCC >Mature Secondary Structure MLVLYDVADGIATITLNRPEVANAQNGPLLEELDAAWTKAAADKDVAVIVLRAEGKHFSA CEEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC GHDLKSGQPLPEKITLEMLYELEARRYLEFSLRWRNVPKPSIAAVQGRCISGGLLLCWPC CCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHCCEEECCCEEEEECC DLIIAAEDALFSDPVVAMGIGGVEYHGHTWELGPRKAKEILFTGRAVTASEAEKIGMVNK CEEEEECCCCCCCCEEEEECCCEEECCCEECCCCHHHHHHEEECCEECHHHHHHHCHHHH VVPRDQLDTETRALAQHIATMPSFGLRQAKRAVNQTLDVQGFYAAIQSVFDVHQTGHGNA CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCE LSVSGWPVLVNLDQMKSAIKKAD EEECCCEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA