Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158315952

Identifier: 158315952

GI number: 158315952

Start: 4955996

End: 4958359

Strand: Reverse

Name: 158315952

Synonym: Franean1_4170

Alternate gene names: NA

Gene position: 4958359-4955996 (Counterclockwise)

Preceding gene: 158315953

Following gene: 158315951

Centisome position: 55.2

GC content: 73.48

Gene sequence:

>2364_bases
GTGGGGCTGCGCGAGCGGCTCGCGGGCAGGCGTGTGTTCGTGACCGGGGTGACCGGGTTCGTCGGTGAGGCGCTGTTGGA
GCGGCTGCTCTCGGAGTTCCCGGACACCCAGGTCGTGGCGCTCGTGCGGCCCCGGGGCAGCCATTCGGGGATGGCCCGGT
TGGAGCGGATGACCCGTAAGCCGGCGTTCGCCGGGCTGCGGGAACGGTTGGGCCGTGAGGGGCTGGCGGCGCGGCTGGCG
GCGCAGGTGCGGGTCATCGAGGGTGACCTGGCCAGTATGGGTGAGTTGCCCGCCGACCTGGACGTGGTGATCCACTGCGC
CGGGGAGGTGTCGTTCGACCCGGCGATCGACGAGGGGTTCGCGACGAACCTGGGCGGGGTGCAGGAGCTGCTGCGCGCGG
TGCGCGCTGCCGGGGCCCGCCCGCATCTGGTGCACGTGTCGACCGCCTATGTCGCCGGGTTGCGTTCGGGGCACATCGCC
GAGGGCCGGCTGGCCCACGAGGTGGACTGGGCGGCGGAGCAGGCGTCGGCCGCGCGGGCCCGCCACGCCGCGGAGGACGC
GTCGCGCTCGCCGGAGAACTCGGCGCGGTTCCGCGAGCAGGCGTCGGCCGAGCATGTGCGGGCCGGCGCGCAGACGGTGT
CGGCGCAGGCGGAGGCGGCGCGGCGGGCGTGGGTGGCGGCGCGGTTGGTCGCCGCGGGCTCCGAACGCGCGCAGGTGCTG
GGCTGGACGGACGCGTACACGTTCACCAAGGCGTTGGGTGAGCGGTATCTGGAGGACTCCCACGGCGATCTGCCGTTGAC
GATCGTCCGCCCGTCGATCATCGAGAGCGCGCTGGCGAAGCCGTTCCCGGGGTGGATCGAGGGGTTCAAGATGGCCGAGC
CGCTGATCCTGGCGTTCGGCCGCGGGGAGCTGCCGGACTTCCCTGCGTCCCCGGATGCCGTCGTCGACATCATCCCGGTG
GATCTGGTCGTCAACGCGCTGCTGGCGGCGGCGGCGAGCCCCCCGCCGCCGGAGCGCCCGGCCTATTACACGGTGTGTTC
GGGGTTCCGGAACCCGCTGCTGTTCCGTGACCTCTACGACTATGTGCGGGGCTATTTCCTGGCCGATCCGCTGCCGCGGC
GCGGCCGCGGGCATATCGGGGTTCCTGAGTGGCCGTTCGCCGGGGCGGTGGCGGTGGAGGCGAAGCTGCGCCGCGGGGAG
AAGGCGGTGGAGTGGGCGAACCGGGTGTTGGCGCACGCGCCGCGTTCGGAGCGGGTTCGCCGGCTGGCCGTCGACTTGGA
ACGTACCGAGGGGCGGGTGGCGTTCCTACGCCGCTACTCCGATGTGTACCGGGCGTACACGAAGGCCGAGCTGGTCTACG
TCGACGACGCCACCGCGGCGCTGCACGCGGCGATGGACCCGGCCGACCAGGTCGACTTCGGGTTCGACCCGGCGTGTTTC
GACTGGCGGCACTACCTGCAGGACGTGCACTGCCCGGCGGTGACGCAGGTGCTGCGCCGGCCGCGCGACGCCGCCCCGGC
GCGGCGGATGGCCCGCAACCTCACCGCCGGCGAGGGGGTGCTGGCCGTGTTCGACCTGGACGGGACGCTGGTGTCCTCGA
CGGTGGTCGAGTCGTATCTGTGGCTGCGGCTGGCCGACGGCGACGTCGGGGAACGGGCCCGGGAGCTGGTGTCGCTGGCG
CGGGCACTGCCGGGGTATCTGCGTGCCGAGCGCCGCGACCGGGGGCATCTGATTCGCTCGGTGTACGGCCGGTACGCCGG
CGCCGACCCGGTGGAGCTGGCCCGGGTCGTCGACGAGGTCGCGGCGGATGTGGTGTTGCGGCGGGTGAAACCGGCGGCGG
TGCGCCGTGTGCGGGAGCATCGCGCGGCCGGGCATCGCACCGTGCTGTTGACCGGGGCGGTCGATGTGCTGACCCGTCCG
CTGGCGCCGTTGTTCGACGAGATCGTCGCGACCGGCCTGGAAGTCGGCGCGGATGGCCGGTACACGGGACGGTTGTTGTC
GTCGCCGCTGGTCGGGGATGCTCGGGCGGCGTTCGTGGATCATTACGCGCGGCGCCGGGGGGCGGACCTGTCCGCGTCGT
GGGCGTACGCGGACAGCCTGTCGGATCTGCCGATGCTGCGCACGGTGGGCAATCCGGTGGCGGTGAACCCGGATGTGGCG
TTGCACAAGGTGGCGCGGGGGGCGGGCTGGCCGATCGAGGAGTGGCCGTCGACGCCGGGTGAGCCGCGGCTGATGGTCGC
CAGCCGCGCTGAGCGGGGCCTGTTCGCCGCGGCGGCCCGCGCCCGGGTTGCCGCGGGCGGCCTGTCAGGGTCGGGGTCGG
GTGGGAGTGGTGTTGTGCGGGTGGAAGTGGGTGAGGGCCGGTGA

Upstream 100 bases:

>100_bases
CCGACGGGTTCGTTCGTGGACGGTCCGGTGTCGCCTACTGTTGCGCACCGGGCGTCCGTCGGGGACGCCGGTGGGGCTGC
GGCGAGTGCGGAGGTGACCG

Downstream 100 bases:

>100_bases
CACGCGGTCTGGAGCTGTACCGGTCGCTGCCGCGGTACGCGGCGGCGCGGGTGGTGTCGGGCCGGTTCCCGCGGCTGTCG
GGGGCGGCGGCGACGACCGC

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 787; Mature: 786

Protein sequence:

>787_residues
MGLRERLAGRRVFVTGVTGFVGEALLERLLSEFPDTQVVALVRPRGSHSGMARLERMTRKPAFAGLRERLGREGLAARLA
AQVRVIEGDLASMGELPADLDVVIHCAGEVSFDPAIDEGFATNLGGVQELLRAVRAAGARPHLVHVSTAYVAGLRSGHIA
EGRLAHEVDWAAEQASAARARHAAEDASRSPENSARFREQASAEHVRAGAQTVSAQAEAARRAWVAARLVAAGSERAQVL
GWTDAYTFTKALGERYLEDSHGDLPLTIVRPSIIESALAKPFPGWIEGFKMAEPLILAFGRGELPDFPASPDAVVDIIPV
DLVVNALLAAAASPPPPERPAYYTVCSGFRNPLLFRDLYDYVRGYFLADPLPRRGRGHIGVPEWPFAGAVAVEAKLRRGE
KAVEWANRVLAHAPRSERVRRLAVDLERTEGRVAFLRRYSDVYRAYTKAELVYVDDATAALHAAMDPADQVDFGFDPACF
DWRHYLQDVHCPAVTQVLRRPRDAAPARRMARNLTAGEGVLAVFDLDGTLVSSTVVESYLWLRLADGDVGERARELVSLA
RALPGYLRAERRDRGHLIRSVYGRYAGADPVELARVVDEVAADVVLRRVKPAAVRRVREHRAAGHRTVLLTGAVDVLTRP
LAPLFDEIVATGLEVGADGRYTGRLLSSPLVGDARAAFVDHYARRRGADLSASWAYADSLSDLPMLRTVGNPVAVNPDVA
LHKVARGAGWPIEEWPSTPGEPRLMVASRAERGLFAAAARARVAAGGLSGSGSGGSGVVRVEVGEGR

Sequences:

>Translated_787_residues
MGLRERLAGRRVFVTGVTGFVGEALLERLLSEFPDTQVVALVRPRGSHSGMARLERMTRKPAFAGLRERLGREGLAARLA
AQVRVIEGDLASMGELPADLDVVIHCAGEVSFDPAIDEGFATNLGGVQELLRAVRAAGARPHLVHVSTAYVAGLRSGHIA
EGRLAHEVDWAAEQASAARARHAAEDASRSPENSARFREQASAEHVRAGAQTVSAQAEAARRAWVAARLVAAGSERAQVL
GWTDAYTFTKALGERYLEDSHGDLPLTIVRPSIIESALAKPFPGWIEGFKMAEPLILAFGRGELPDFPASPDAVVDIIPV
DLVVNALLAAAASPPPPERPAYYTVCSGFRNPLLFRDLYDYVRGYFLADPLPRRGRGHIGVPEWPFAGAVAVEAKLRRGE
KAVEWANRVLAHAPRSERVRRLAVDLERTEGRVAFLRRYSDVYRAYTKAELVYVDDATAALHAAMDPADQVDFGFDPACF
DWRHYLQDVHCPAVTQVLRRPRDAAPARRMARNLTAGEGVLAVFDLDGTLVSSTVVESYLWLRLADGDVGERARELVSLA
RALPGYLRAERRDRGHLIRSVYGRYAGADPVELARVVDEVAADVVLRRVKPAAVRRVREHRAAGHRTVLLTGAVDVLTRP
LAPLFDEIVATGLEVGADGRYTGRLLSSPLVGDARAAFVDHYARRRGADLSASWAYADSLSDLPMLRTVGNPVAVNPDVA
LHKVARGAGWPIEEWPSTPGEPRLMVASRAERGLFAAAARARVAAGGLSGSGSGGSGVVRVEVGEGR
>Mature_786_residues
GLRERLAGRRVFVTGVTGFVGEALLERLLSEFPDTQVVALVRPRGSHSGMARLERMTRKPAFAGLRERLGREGLAARLAA
QVRVIEGDLASMGELPADLDVVIHCAGEVSFDPAIDEGFATNLGGVQELLRAVRAAGARPHLVHVSTAYVAGLRSGHIAE
GRLAHEVDWAAEQASAARARHAAEDASRSPENSARFREQASAEHVRAGAQTVSAQAEAARRAWVAARLVAAGSERAQVLG
WTDAYTFTKALGERYLEDSHGDLPLTIVRPSIIESALAKPFPGWIEGFKMAEPLILAFGRGELPDFPASPDAVVDIIPVD
LVVNALLAAAASPPPPERPAYYTVCSGFRNPLLFRDLYDYVRGYFLADPLPRRGRGHIGVPEWPFAGAVAVEAKLRRGEK
AVEWANRVLAHAPRSERVRRLAVDLERTEGRVAFLRRYSDVYRAYTKAELVYVDDATAALHAAMDPADQVDFGFDPACFD
WRHYLQDVHCPAVTQVLRRPRDAAPARRMARNLTAGEGVLAVFDLDGTLVSSTVVESYLWLRLADGDVGERARELVSLAR
ALPGYLRAERRDRGHLIRSVYGRYAGADPVELARVVDEVAADVVLRRVKPAAVRRVREHRAAGHRTVLLTGAVDVLTRPL
APLFDEIVATGLEVGADGRYTGRLLSSPLVGDARAAFVDHYARRRGADLSASWAYADSLSDLPMLRTVGNPVAVNPDVAL
HKVARGAGWPIEEWPSTPGEPRLMVASRAERGLFAAAARARVAAGGLSGSGSGGSGVVRVEVGEGR

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serB family [H]

Homologues:

Organism=Homo sapiens, GI31542658, Length=504, Percent_Identity=23.8095238095238, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI24308324, Length=340, Percent_Identity=25, Blast_Score=94, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17570463, Length=511, Percent_Identity=24.4618395303327, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI28572029, Length=492, Percent_Identity=23.5772357723577, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI28573762, Length=383, Percent_Identity=25.5874673629243, Blast_Score=114, Evalue=3e-25,
Organism=Drosophila melanogaster, GI28572084, Length=333, Percent_Identity=25.8258258258258, Blast_Score=113, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24649464, Length=333, Percent_Identity=25.8258258258258, Blast_Score=113, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24647494, Length=331, Percent_Identity=26.8882175226586, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI281363511, Length=253, Percent_Identity=25.296442687747, Blast_Score=95, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281363509, Length=253, Percent_Identity=25.296442687747, Blast_Score=95, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24654209, Length=253, Percent_Identity=25.296442687747, Blast_Score=95, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24648302, Length=118, Percent_Identity=32.2033898305085, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24640000, Length=159, Percent_Identity=32.7044025157233, Blast_Score=73, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR006385 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85097; Mature: 84965

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRERLAGRRVFVTGVTGFVGEALLERLLSEFPDTQVVALVRPRGSHSGMARLERMTRK
CCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCC
PAFAGLRERLGREGLAARLAAQVRVIEGDLASMGELPADLDVVIHCAGEVSFDPAIDEGF
HHHHHHHHHHCHHHHHHHHHHHHHEECCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC
ATNLGGVQELLRAVRAAGARPHLVHVSTAYVAGLRSGHIAEGRLAHEVDWAAEQASAARA
CCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
RHAAEDASRSPENSARFREQASAEHVRAGAQTVSAQAEAARRAWVAARLVAAGSERAQVL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
GWTDAYTFTKALGERYLEDSHGDLPLTIVRPSIIESALAKPFPGWIEGFKMAEPLILAFG
ECCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHCCCCEEEEC
RGELPDFPASPDAVVDIIPVDLVVNALLAAAASPPPPERPAYYTVCSGFRNPLLFRDLYD
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHH
YVRGYFLADPLPRRGRGHIGVPEWPFAGAVAVEAKLRRGEKAVEWANRVLAHAPRSERVR
HHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
RLAVDLERTEGRVAFLRRYSDVYRAYTKAELVYVDDATAALHAAMDPADQVDFGFDPACF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCHHHCCCCCCCHHH
DWRHYLQDVHCPAVTQVLRRPRDAAPARRMARNLTAGEGVLAVFDLDGTLVSSTVVESYL
HHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHH
WLRLADGDVGERARELVSLARALPGYLRAERRDRGHLIRSVYGRYAGADPVELARVVDEV
EEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AADVVLRRVKPAAVRRVREHRAAGHRTVLLTGAVDVLTRPLAPLFDEIVATGLEVGADGR
HHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECHHHHHHCCHHHHHHHHHHHCHHCCCCCC
YTGRLLSSPLVGDARAAFVDHYARRRGADLSASWAYADSLSDLPMLRTVGNPVAVNPDVA
CHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHCCCCEEECCCHH
LHKVARGAGWPIEEWPSTPGEPRLMVASRAERGLFAAAARARVAAGGLSGSGSGGSGVVR
HHHHHHCCCCCHHHCCCCCCCCEEEEECHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEE
VEVGEGR
EEECCCC
>Mature Secondary Structure 
GLRERLAGRRVFVTGVTGFVGEALLERLLSEFPDTQVVALVRPRGSHSGMARLERMTRK
CCHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCC
PAFAGLRERLGREGLAARLAAQVRVIEGDLASMGELPADLDVVIHCAGEVSFDPAIDEGF
HHHHHHHHHHCHHHHHHHHHHHHHEECCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC
ATNLGGVQELLRAVRAAGARPHLVHVSTAYVAGLRSGHIAEGRLAHEVDWAAEQASAARA
CCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
RHAAEDASRSPENSARFREQASAEHVRAGAQTVSAQAEAARRAWVAARLVAAGSERAQVL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
GWTDAYTFTKALGERYLEDSHGDLPLTIVRPSIIESALAKPFPGWIEGFKMAEPLILAFG
ECCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHCCCCEEEEC
RGELPDFPASPDAVVDIIPVDLVVNALLAAAASPPPPERPAYYTVCSGFRNPLLFRDLYD
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHH
YVRGYFLADPLPRRGRGHIGVPEWPFAGAVAVEAKLRRGEKAVEWANRVLAHAPRSERVR
HHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
RLAVDLERTEGRVAFLRRYSDVYRAYTKAELVYVDDATAALHAAMDPADQVDFGFDPACF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCHHHCCCCCCCHHH
DWRHYLQDVHCPAVTQVLRRPRDAAPARRMARNLTAGEGVLAVFDLDGTLVSSTVVESYL
HHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHH
WLRLADGDVGERARELVSLARALPGYLRAERRDRGHLIRSVYGRYAGADPVELARVVDEV
EEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AADVVLRRVKPAAVRRVREHRAAGHRTVLLTGAVDVLTRPLAPLFDEIVATGLEVGADGR
HHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECHHHHHHCCHHHHHHHHHHHCHHCCCCCC
YTGRLLSSPLVGDARAAFVDHYARRRGADLSASWAYADSLSDLPMLRTVGNPVAVNPDVA
CHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHCCCCEEECCCHH
LHKVARGAGWPIEEWPSTPGEPRLMVASRAERGLFAAAARARVAAGGLSGSGSGGSGVVR
HHHHHHCCCCCHHHCCCCCCCCEEEEECHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEE
VEVGEGR
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA