| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is tauB [C]
Identifier: 158315842
GI number: 158315842
Start: 4837412
End: 4838278
Strand: Reverse
Name: tauB [C]
Synonym: Franean1_4057
Alternate gene names: 158315842
Gene position: 4838278-4837412 (Counterclockwise)
Preceding gene: 158315846
Following gene: 158315828
Centisome position: 53.87
GC content: 74.28
Gene sequence:
>867_bases GTGGATGATGTGCTCATGAGGTCGAGGACCCGACCCGCGGCAGCCCCGGCCGTGGGTCTCGCCCCACCGGGGACGGCGCT GGCGTTCGACGGCGTCGGCATGACGTTCCCGGACGGGACGCGGGCGCTGGAGGACATCTCGCTGCGCGTCGGGGCCGGCG AGATCGTGGCGCTGATCGGGGCGTCGGGCTCGGGCAAGTCGACGCTGCTGCGCATCGCCGCCGGGCTCGCGGCGCCGACG AGCGGCTCGGTGCTCGCCGGGCCGGGTTCACCCGGCTACATCTTCCAGGACCCGACACTGCTGCCCTGGCGGACGGTCGA GGGCAACATCGGGCTGTTCGCCGAGCTCGACGGCGTCCCCCGGGCGCGGCGCGACCGCCTGGTGGCGGACGCGATCACCA TGACCGGCCTGCGCGGCTACGAGCGGTACCGGCCGCGGGCGCTGTCGGGCGGGATGCGGATGCGGGTGTCGCTCGCCCGC GCGCTGACGGCCCGCCCGTCGTTGTTCCTGTTCGACGAGCCGTTCGGCGCGCTGGACGAGATCACCCGCGAGCGGCTCGG TGACGAGCTGCTGCGCCTGCACCTGCGGGAGGGGTTCGCCGGGCTGTTCGTGACCCATTCGGTGGTCGAGGCCGCGCTGC TGGCCAGCAGGGTAGCCGTGCTGTCCGCCCGCTCGGGGCGGCTGCTCGCCGAGATCGAGATCCCGTTCGGCTACCCGCGC GAGTCGTCGCTGCGTTACGACGCCGCTTTTGGACGGGTCGCACGCGAGGTGTCGGAGGCGCTCAAGGACTCGTTCGCCGG GCCCGGACTCGCCGGCCCTGGAGAATCCGGGCCTGGCGCCGCGGGCGACGCCACCGGCCCAGCGTAG
Upstream 100 bases:
>100_bases TCGCCGTCACGGTGGTGGGCTCACCGCGGGTATCCGGCATCTCAGTATCTTCGAATTTTTCCATGCCTTGACGGTCAGCA TGCAGCCAGGTACCGCGAGC
Downstream 100 bases:
>100_bases ATCAGCCGGTGCGCGGCGGCGGACGCGCGGCGGCGGACGGGGCCGGCCGGGCCGGCGTCGCGCAGCGCCACCGTGGCCGC CATGGCGCCCGGCCCGCCGT
Product: ABC transporter-like protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MDDVLMRSRTRPAAAPAVGLAPPGTALAFDGVGMTFPDGTRALEDISLRVGAGEIVALIGASGSGKSTLLRIAAGLAAPT SGSVLAGPGSPGYIFQDPTLLPWRTVEGNIGLFAELDGVPRARRDRLVADAITMTGLRGYERYRPRALSGGMRMRVSLAR ALTARPSLFLFDEPFGALDEITRERLGDELLRLHLREGFAGLFVTHSVVEAALLASRVAVLSARSGRLLAEIEIPFGYPR ESSLRYDAAFGRVAREVSEALKDSFAGPGLAGPGESGPGAAGDATGPA
Sequences:
>Translated_288_residues MDDVLMRSRTRPAAAPAVGLAPPGTALAFDGVGMTFPDGTRALEDISLRVGAGEIVALIGASGSGKSTLLRIAAGLAAPT SGSVLAGPGSPGYIFQDPTLLPWRTVEGNIGLFAELDGVPRARRDRLVADAITMTGLRGYERYRPRALSGGMRMRVSLAR ALTARPSLFLFDEPFGALDEITRERLGDELLRLHLREGFAGLFVTHSVVEAALLASRVAVLSARSGRLLAEIEIPFGYPR ESSLRYDAAFGRVAREVSEALKDSFAGPGLAGPGESGPGAAGDATGPA >Mature_288_residues MDDVLMRSRTRPAAAPAVGLAPPGTALAFDGVGMTFPDGTRALEDISLRVGAGEIVALIGASGSGKSTLLRIAAGLAAPT SGSVLAGPGSPGYIFQDPTLLPWRTVEGNIGLFAELDGVPRARRDRLVADAITMTGLRGYERYRPRALSGGMRMRVSLAR ALTARPSLFLFDEPFGALDEITRERLGDELLRLHLREGFAGLFVTHSVVEAALLASRVAVLSARSGRLLAEIEIPFGYPR ESSLRYDAAFGRVAREVSEALKDSFAGPGLAGPGESGPGAAGDATGPA
Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1116
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI31657092, Length=221, Percent_Identity=30.316742081448, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI116734710, Length=192, Percent_Identity=31.25, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI27477115, Length=203, Percent_Identity=30.0492610837438, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI105990541, Length=203, Percent_Identity=30.5418719211823, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI42490749, Length=201, Percent_Identity=31.3432835820896, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI150417984, Length=228, Percent_Identity=31.5789473684211, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI6005701, Length=195, Percent_Identity=28.2051282051282, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI153792144, Length=204, Percent_Identity=30.3921568627451, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI27436953, Length=192, Percent_Identity=28.125, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI27881501, Length=192, Percent_Identity=25.5208333333333, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI30795238, Length=192, Percent_Identity=25.5208333333333, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI21536376, Length=204, Percent_Identity=28.4313725490196, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI45446740, Length=209, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI47078218, Length=209, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI46592971, Length=149, Percent_Identity=36.9127516778523, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI46592956, Length=149, Percent_Identity=36.9127516778523, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI46592964, Length=149, Percent_Identity=36.9127516778523, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI46592915, Length=149, Percent_Identity=36.9127516778523, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI46592978, Length=149, Percent_Identity=36.9127516778523, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI46592898, Length=149, Percent_Identity=36.9127516778523, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI27262624, Length=204, Percent_Identity=24.0196078431373, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI27262626, Length=204, Percent_Identity=24.0196078431373, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI66529005, Length=178, Percent_Identity=32.0224719101124, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI11967971, Length=172, Percent_Identity=32.5581395348837, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1786563, Length=205, Percent_Identity=40, Blast_Score=150, Evalue=9e-38, Organism=Escherichia coli, GI87081791, Length=250, Percent_Identity=36, Blast_Score=144, Evalue=6e-36, Organism=Escherichia coli, GI1787164, Length=224, Percent_Identity=39.7321428571429, Blast_Score=134, Evalue=9e-33, Organism=Escherichia coli, GI87082267, Length=206, Percent_Identity=36.4077669902913, Blast_Score=124, Evalue=9e-30, Organism=Escherichia coli, GI1788761, Length=234, Percent_Identity=39.3162393162393, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1786398, Length=234, Percent_Identity=35.4700854700855, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1790467, Length=218, Percent_Identity=37.1559633027523, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI1787712, Length=213, Percent_Identity=35.2112676056338, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1789032, Length=196, Percent_Identity=35.7142857142857, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1787370, Length=221, Percent_Identity=33.4841628959276, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI87081709, Length=219, Percent_Identity=32.4200913242009, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1788450, Length=209, Percent_Identity=36.8421052631579, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=35.3711790393013, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787029, Length=220, Percent_Identity=34.0909090909091, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1788225, Length=218, Percent_Identity=34.8623853211009, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787105, Length=199, Percent_Identity=36.6834170854271, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1789873, Length=214, Percent_Identity=32.2429906542056, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1786703, Length=184, Percent_Identity=36.4130434782609, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1787758, Length=217, Percent_Identity=29.0322580645161, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787089, Length=221, Percent_Identity=32.579185520362, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786319, Length=209, Percent_Identity=31.1004784688995, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787547, Length=199, Percent_Identity=30.1507537688442, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1786253, Length=190, Percent_Identity=36.8421052631579, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1788506, Length=257, Percent_Identity=29.1828793774319, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788210, Length=224, Percent_Identity=33.4821428571429, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1789672, Length=218, Percent_Identity=29.3577981651376, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1790162, Length=205, Percent_Identity=30.2439024390244, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI48994943, Length=232, Percent_Identity=27.5862068965517, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788053, Length=175, Percent_Identity=36, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1789586, Length=209, Percent_Identity=32.5358851674641, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789593, Length=208, Percent_Identity=28.3653846153846, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI145693107, Length=207, Percent_Identity=32.3671497584541, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI87082268, Length=223, Percent_Identity=30.9417040358744, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789962, Length=212, Percent_Identity=28.7735849056604, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787500, Length=205, Percent_Identity=29.7560975609756, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI87081782, Length=220, Percent_Identity=30.4545454545455, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI48994883, Length=218, Percent_Identity=30.2752293577982, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790190, Length=277, Percent_Identity=27.4368231046931, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI48995001, Length=208, Percent_Identity=28.8461538461538, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1786872, Length=199, Percent_Identity=34.1708542713568, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI48994997, Length=208, Percent_Identity=30.2884615384615, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1789890, Length=223, Percent_Identity=30.4932735426009, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1790739, Length=229, Percent_Identity=30.5676855895196, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI115533608, Length=214, Percent_Identity=29.9065420560748, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17510237, Length=213, Percent_Identity=28.6384976525822, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193209708, Length=187, Percent_Identity=32.0855614973262, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71992285, Length=228, Percent_Identity=30.2631578947368, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17565586, Length=196, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71988343, Length=174, Percent_Identity=29.8850574712644, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71983523, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983516, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983510, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193208177, Length=174, Percent_Identity=29.8850574712644, Blast_Score=64, Evalue=1e-10, Organism=Drosophila melanogaster, GI116007184, Length=198, Percent_Identity=32.3232323232323, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI221500365, Length=198, Percent_Identity=32.3232323232323, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI221512771, Length=194, Percent_Identity=30.9278350515464, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI28574150, Length=211, Percent_Identity=27.4881516587678, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI116007328, Length=211, Percent_Identity=27.4881516587678, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24666092, Length=219, Percent_Identity=29.6803652968037, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24648279, Length=185, Percent_Identity=33.5135135135135, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24585091, Length=185, Percent_Identity=35.6756756756757, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI161078426, Length=189, Percent_Identity=32.8042328042328, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24582014, Length=216, Percent_Identity=30.5555555555556, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24582012, Length=216, Percent_Identity=30.5555555555556, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24648314, Length=193, Percent_Identity=29.5336787564767, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45550390, Length=180, Percent_Identity=34.4444444444444, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI281361582, Length=184, Percent_Identity=32.0652173913043, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24643674, Length=190, Percent_Identity=27.3684210526316, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574259, Length=185, Percent_Identity=33.5135135135135, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85816269, Length=197, Percent_Identity=28.4263959390863, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24580553, Length=197, Percent_Identity=28.4263959390863, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI85724864, Length=197, Percent_Identity=28.4263959390863, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24580555, Length=197, Percent_Identity=28.4263959390863, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI62484234, Length=178, Percent_Identity=32.5842696629214, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24662800, Length=143, Percent_Identity=31.4685314685315, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI45552437, Length=175, Percent_Identity=33.1428571428571, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24585557, Length=175, Percent_Identity=33.1428571428571, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI21357907, Length=199, Percent_Identity=28.1407035175879, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI85725262, Length=203, Percent_Identity=27.0935960591133, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 30040; Mature: 30040
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDVLMRSRTRPAAAPAVGLAPPGTALAFDGVGMTFPDGTRALEDISLRVGAGEIVALIG CCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHEEEECCCEEEEEEE ASGSGKSTLLRIAAGLAAPTSGSVLAGPGSPGYIFQDPTLLPWRTVEGNIGLFAELDGVP CCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCEEEECCCCCCEEECCCCEEEEEECCCCC RARRDRLVADAITMTGLRGYERYRPRALSGGMRMRVSLARALTARPSLFLFDEPFGALDE CHHHHHHHHHHHHHHHCHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHH ITRERLGDELLRLHLREGFAGLFVTHSVVEAALLASRVAVLSARSGRLLAEIEIPFGYPR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC ESSLRYDAAFGRVAREVSEALKDSFAGPGLAGPGESGPGAAGDATGPA CCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDDVLMRSRTRPAAAPAVGLAPPGTALAFDGVGMTFPDGTRALEDISLRVGAGEIVALIG CCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHEEEECCCEEEEEEE ASGSGKSTLLRIAAGLAAPTSGSVLAGPGSPGYIFQDPTLLPWRTVEGNIGLFAELDGVP CCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCEEEECCCCCCEEECCCCEEEEEECCCCC RARRDRLVADAITMTGLRGYERYRPRALSGGMRMRVSLARALTARPSLFLFDEPFGALDE CHHHHHHHHHHHHHHHCHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHH ITRERLGDELLRLHLREGFAGLFVTHSVVEAALLASRVAVLSARSGRLLAEIEIPFGYPR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC ESSLRYDAAFGRVAREVSEALKDSFAGPGLAGPGESGPGAAGDATGPA CCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]