Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315846

Identifier: 158315846

GI number: 158315846

Start: 4840722

End: 4841825

Strand: Reverse

Name: 158315846

Synonym: Franean1_4061

Alternate gene names: NA

Gene position: 4841825-4840722 (Counterclockwise)

Preceding gene: 158315850

Following gene: 158315842

Centisome position: 53.91

GC content: 76.45

Gene sequence:

>1104_bases
ATGGAGTCGGTGACGGCGGGAGTCGGTCGCGAGGTGGCAGTCGAGGTCGTGACGACGGCTTCGCTCGCACCGTCCATTCA
CAACACCCAGCCGTGGCGGTGGCGTCTCGCCGACGGCCGGCTGACGCTGCGGCCGGACGTCGAGCGGCGCCTCGCCGTCC
TCGACCCGGACGGGCGGCAGCTCCTGGTGAGCTGCGGCGCGGCGCTGCTGCACGCCCGGCTGGCGTTCCGGGTGCTCGGC
TTCGAGCCGGTGGTGGAGCTGCTGCCGGAGGCGACCGGTTCCGGCGGGCTGGAGCCGGTGCTGTCCGGTGGCCTGGTCCT
CGCGTCGATGGGGATCGGCGGGCGGGCGGCGCCGACGGATTCCGACCGGCTGCTGTTCTCGGCCGCCGGGGCCCGGCACA
CCGACCGTCGGCCGTTCGAGGCACGCCCGCTCGCCGGCGACCTGGTCGACCGGATGCGCCGCGCCGCCGAGTCCGAGGGC
GCCTGGCTGATGCCGCTGTCGCACTCCGACCAGCGGCTGGACGCGGCGGTGGTCGCGGCCCGGGCGGACTGGGCGGAGCA
GGCCGACCCCGCCTACCGGGCCGAGCTGGCGTCGTGGCGGCGTGGGCAGGGCCCGACCGCCGACGGGGTGCCGACCGGCG
TGGCCTCGACCCATCACCCCGAGCGGGCCAGCGACTTCCCGCTGCGCGACTTCGACACCCGCGGCGCGCCGGGCATCGCG
GCGCCGCGTTCCGAGGAGGCCGACGGCGGCGCCGACGCGGACGCGGGTCTCGCCCCGACCGTCGAACAGCGCCCGGAGGA
GCTGCCGTCGGTGGAGCGCCCCGCTGTCGTCGTGGTCGGCACGGACGCCGACCAGGCGGAGGACAGGCTGCGCGCCGGGC
AGGCGCTGGCGCGGGTTCTGCTCACCGTGACCGCGGCCGGCGCGGCCGCGTCGCCGATGGGCCAGCCCATCGACAGCGAC
GGGTACCGTTCGGTGATCGAGCGGATGCTGAGCATCGCCGGGCACGTGCAGATGATCCTTCGGGTCGGCTATCCCCGCCG
GGACGCGGTGGCCTCCGCGCTGACCCCGCGGCGCCCGATCGGCGAGATCCTGACCTTCGGTTAG

Upstream 100 bases:

>100_bases
CACCCTGCGGTTGGCCCGCCGCCGACTACCGTGGACACGGGCCGTGCCGGGCACGGTGCGCCCGCAACACGCCACCGCAC
GGCGAGGGGAGTTCGCGATC

Downstream 100 bases:

>100_bases
CTCCTGGGCGGCGGGCCGGGGGCCCGCCGCCGAAGCCACCGGCAGCCGGCCCGTCAACCGCGGTCGAGGGCCGCGAGACC
CAGGTCGAGGTCCAGGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MESVTAGVGREVAVEVVTTASLAPSIHNTQPWRWRLADGRLTLRPDVERRLAVLDPDGRQLLVSCGAALLHARLAFRVLG
FEPVVELLPEATGSGGLEPVLSGGLVLASMGIGGRAAPTDSDRLLFSAAGARHTDRRPFEARPLAGDLVDRMRRAAESEG
AWLMPLSHSDQRLDAAVVAARADWAEQADPAYRAELASWRRGQGPTADGVPTGVASTHHPERASDFPLRDFDTRGAPGIA
APRSEEADGGADADAGLAPTVEQRPEELPSVERPAVVVVGTDADQAEDRLRAGQALARVLLTVTAAGAAASPMGQPIDSD
GYRSVIERMLSIAGHVQMILRVGYPRRDAVASALTPRRPIGEILTFG

Sequences:

>Translated_367_residues
MESVTAGVGREVAVEVVTTASLAPSIHNTQPWRWRLADGRLTLRPDVERRLAVLDPDGRQLLVSCGAALLHARLAFRVLG
FEPVVELLPEATGSGGLEPVLSGGLVLASMGIGGRAAPTDSDRLLFSAAGARHTDRRPFEARPLAGDLVDRMRRAAESEG
AWLMPLSHSDQRLDAAVVAARADWAEQADPAYRAELASWRRGQGPTADGVPTGVASTHHPERASDFPLRDFDTRGAPGIA
APRSEEADGGADADAGLAPTVEQRPEELPSVERPAVVVVGTDADQAEDRLRAGQALARVLLTVTAAGAAASPMGQPIDSD
GYRSVIERMLSIAGHVQMILRVGYPRRDAVASALTPRRPIGEILTFG
>Mature_367_residues
MESVTAGVGREVAVEVVTTASLAPSIHNTQPWRWRLADGRLTLRPDVERRLAVLDPDGRQLLVSCGAALLHARLAFRVLG
FEPVVELLPEATGSGGLEPVLSGGLVLASMGIGGRAAPTDSDRLLFSAAGARHTDRRPFEARPLAGDLVDRMRRAAESEG
AWLMPLSHSDQRLDAAVVAARADWAEQADPAYRAELASWRRGQGPTADGVPTGVASTHHPERASDFPLRDFDTRGAPGIA
APRSEEADGGADADAGLAPTVEQRPEELPSVERPAVVVVGTDADQAEDRLRAGQALARVLLTVTAAGAAASPMGQPIDSD
GYRSVIERMLSIAGHVQMILRVGYPRRDAVASALTPRRPIGEILTFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 38811; Mature: 38811

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESVTAGVGREVAVEVVTTASLAPSIHNTQPWRWRLADGRLTLRPDVERRLAVLDPDGRQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEECCCCCCEEEEECCCCHH
LLVSCGAALLHARLAFRVLGFEPVVELLPEATGSGGLEPVLSGGLVLASMGIGGRAAPTD
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHCCEEEEECCCCCCCCCCC
SDRLLFSAAGARHTDRRPFEARPLAGDLVDRMRRAAESEGAWLMPLSHSDQRLDAAVVAA
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
RADWAEQADPAYRAELASWRRGQGPTADGVPTGVASTHHPERASDFPLRDFDTRGAPGIA
HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APRSEEADGGADADAGLAPTVEQRPEELPSVERPAVVVVGTDADQAEDRLRAGQALARVL
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
LTVTAAGAAASPMGQPIDSDGYRSVIERMLSIAGHVQMILRVGYPRRDAVASALTPRRPI
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCH
GEILTFG
HHHHCCC
>Mature Secondary Structure
MESVTAGVGREVAVEVVTTASLAPSIHNTQPWRWRLADGRLTLRPDVERRLAVLDPDGRQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEECCCCCCEEEEECCCCHH
LLVSCGAALLHARLAFRVLGFEPVVELLPEATGSGGLEPVLSGGLVLASMGIGGRAAPTD
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHCCEEEEECCCCCCCCCCC
SDRLLFSAAGARHTDRRPFEARPLAGDLVDRMRRAAESEGAWLMPLSHSDQRLDAAVVAA
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
RADWAEQADPAYRAELASWRRGQGPTADGVPTGVASTHHPERASDFPLRDFDTRGAPGIA
HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APRSEEADGGADADAGLAPTVEQRPEELPSVERPAVVVVGTDADQAEDRLRAGQALARVL
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
LTVTAAGAAASPMGQPIDSDGYRSVIERMLSIAGHVQMILRVGYPRRDAVASALTPRRPI
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCH
GEILTFG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]