Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315642

Identifier: 158315642

GI number: 158315642

Start: 4574453

End: 4574863

Strand: Reverse

Name: 158315642

Synonym: Franean1_3852

Alternate gene names: NA

Gene position: 4574863-4574453 (Counterclockwise)

Preceding gene: 158315644

Following gene: 158315641

Centisome position: 50.93

GC content: 61.07

Gene sequence:

>411_bases
GTGTTCAAGCAGGTCTGCTTCTTCAAGAAGCGCCCGGACATGACAACGGAAGAGTTCCTGGACTACTACGAGAACCAGCA
CACACAGCTGGCGAAGAAGATCGGGAAGCCGGCCATACCGAACGCGGTCCGGTACGTGCGACGCTACCTGACTCCCGTCG
AGAACCCGGTGACCGGAGAAATCCACGACAGCGGTTACGACTGCATCATGGAGATCTGGTGGAACAGCCGCGAGGACTTC
GAGAACTCGCAGCGTCTCATCAGGGACCCCGAGCGGCTGCCGCACACGATCGAGGACGAGAAGAAGCTGTTCGCCACGCA
CGCCAACCCGATCTGCATCGTGGAGGAACACGATTCGCCGATGGGTCCCGACGGGGAGACCTACGACTGGGTTCCGGTCG
TCCGCGGGTGA

Upstream 100 bases:

>100_bases
TTGCTGGCCGGAAACTGGGGAACGCAGAAGCTCAACCGACTGTCGGCCGTAGGCACAGCCGAGCTGGGCCCGGCCGGATT
TTTGAGAGGGGCCGCGCCGC

Downstream 100 bases:

>100_bases
GCGCCCCGGAGGAACGGCAGGGACCTCCCGGCGGCTTTGACCATCAGGCCCGGTCCGGACCCGACAGGAAGCGGTTAGCC
AGATGAGTGACCTTCATGAT

Product: ethyl tert-butyl ether degradation EthD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MFKQVCFFKKRPDMTTEEFLDYYENQHTQLAKKIGKPAIPNAVRYVRRYLTPVENPVTGEIHDSGYDCIMEIWWNSREDF
ENSQRLIRDPERLPHTIEDEKKLFATHANPICIVEEHDSPMGPDGETYDWVPVVRG

Sequences:

>Translated_136_residues
MFKQVCFFKKRPDMTTEEFLDYYENQHTQLAKKIGKPAIPNAVRYVRRYLTPVENPVTGEIHDSGYDCIMEIWWNSREDF
ENSQRLIRDPERLPHTIEDEKKLFATHANPICIVEEHDSPMGPDGETYDWVPVVRG
>Mature_136_residues
MFKQVCFFKKRPDMTTEEFLDYYENQHTQLAKKIGKPAIPNAVRYVRRYLTPVENPVTGEIHDSGYDCIMEIWWNSREDF
ENSQRLIRDPERLPHTIEDEKKLFATHANPICIVEEHDSPMGPDGETYDWVPVVRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16058; Mature: 16058

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKQVCFFKKRPDMTTEEFLDYYENQHTQLAKKIGKPAIPNAVRYVRRYLTPVENPVTGE
CCCCHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
IHDSGYDCIMEIWWNSREDFENSQRLIRDPERLPHTIEDEKKLFATHANPICIVEEHDSP
CCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCCEEEEECCCCC
MGPDGETYDWVPVVRG
CCCCCCCCCCEECCCC
>Mature Secondary Structure
MFKQVCFFKKRPDMTTEEFLDYYENQHTQLAKKIGKPAIPNAVRYVRRYLTPVENPVTGE
CCCCHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
IHDSGYDCIMEIWWNSREDFENSQRLIRDPERLPHTIEDEKKLFATHANPICIVEEHDSP
CCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCCEEEEECCCCC
MGPDGETYDWVPVVRG
CCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA