| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315641
Identifier: 158315641
GI number: 158315641
Start: 4573273
End: 4574370
Strand: Reverse
Name: 158315641
Synonym: Franean1_3851
Alternate gene names: NA
Gene position: 4574370-4573273 (Counterclockwise)
Preceding gene: 158315642
Following gene: 158315638
Centisome position: 50.93
GC content: 70.13
Gene sequence:
>1098_bases ATGAGTGACCTTCATGATCTCCCGGCCCGGGTCTTCAGCCTCATAGAGTCGGGGGTGGTGGCCGAGTTCTCGACGGTGTC CGCGGCCGGCATTCCGATCGACACGCCCACCTACTATTTTCCGGCCGACGACATGTCGACGATCGACCTGGCAACGGGCC TGCCCAATCCGGCCAAGGCCGAGCGGGTGCGGCGCACCTCGAAGGTCGGGCTCCTGATCGAGGGCCGCCCCGAGGAACCG GTCGTGGTCATTCGAGCCCACGGTGCGGTGCGCGACAGCGACATCCAGGCCAACGCCATCCGCTATCTCGCCGAGACCGG CTACGAGGGGATCAGCCACGGCATCACGTGGGAGGAGGCACGCAAGGCCGTCACCTACTGGTCTCGGATCATCATCGAGA ACAAGCCCGAACGGGTGTACTGGTGGGACAGCCACGCGGCCCTCGACGACCCACCGCAGGTGTGGTCCGCGGCGCCCGAC ACGGTCTACCCGACATCCGACCCCTCGCCCGCCCGCAGGATGAAGCGGTCGGCCTGGCCGGTCCGTCCCTGGCAGGACGT GGCCAGGGAGGCCGTGGAGGGCGGCACTCCGGCGCATCTGTCGGTGCTCGACGAGGACGGCTTTCCGCTTCCGATGCGGG CGACCTCCTTCGAGCTGACAGCCGAGGGCTTCCGGCTGGCGGTGCCCACGGGCACCCCCTGGCGGCTGCGGGGCAGGGCG TCGCTCACCTTCGCGGGTTTCCGTACCTTCGTCGGCGACGCCGGAGCGGACGGCGGTGCTGAAGCGAACGGCGGTGCTGA AGCGAACGGCGGTGCTGGAGTGGACGGCGGCGACCGCGTCCTGTTCCGCGTCGAGCGCTCGCTCCCCCAGCACCCGGCGA CACTCGACACGAAGCAGGTTCTCCAGCCGAGCGAGGACACCCTCGCCAAGGCGAGGGCACGGCTCGAGTACGAGGCTGAG CGGCGCGGCCAGTCCCTCCCGGTCATCCCGGCGGACCCCCCGCCACGGACCCGCATCGCGCTGATCCGCCGGGCGCGCAT CGCCAGCGACGCACCGATCACCGGCATCACCGAGGAGCACGGGAACCGAAGGACCTGA
Upstream 100 bases:
>100_bases CCGGTCGTCCGCGGGTGAGCGCCCCGGAGGAACGGCAGGGACCTCCCGGCGGCTTTGACCATCAGGCCCGGTCCGGACCC GACAGGAAGCGGTTAGCCAG
Downstream 100 bases:
>100_bases CCCACCAGCCGCGCCCGCGGGCGGTACGCCGGGCCGCGGGCCGGCTCATCCCTTGGCAGCGGCCGCACCGCCACGGCGCA GAGGGCGCGCGGGGGGCGGC
Product: hemerythrin HHE cation binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSDLHDLPARVFSLIESGVVAEFSTVSAAGIPIDTPTYYFPADDMSTIDLATGLPNPAKAERVRRTSKVGLLIEGRPEEP VVVIRAHGAVRDSDIQANAIRYLAETGYEGISHGITWEEARKAVTYWSRIIIENKPERVYWWDSHAALDDPPQVWSAAPD TVYPTSDPSPARRMKRSAWPVRPWQDVAREAVEGGTPAHLSVLDEDGFPLPMRATSFELTAEGFRLAVPTGTPWRLRGRA SLTFAGFRTFVGDAGADGGAEANGGAEANGGAGVDGGDRVLFRVERSLPQHPATLDTKQVLQPSEDTLAKARARLEYEAE RRGQSLPVIPADPPPRTRIALIRRARIASDAPITGITEEHGNRRT
Sequences:
>Translated_365_residues MSDLHDLPARVFSLIESGVVAEFSTVSAAGIPIDTPTYYFPADDMSTIDLATGLPNPAKAERVRRTSKVGLLIEGRPEEP VVVIRAHGAVRDSDIQANAIRYLAETGYEGISHGITWEEARKAVTYWSRIIIENKPERVYWWDSHAALDDPPQVWSAAPD TVYPTSDPSPARRMKRSAWPVRPWQDVAREAVEGGTPAHLSVLDEDGFPLPMRATSFELTAEGFRLAVPTGTPWRLRGRA SLTFAGFRTFVGDAGADGGAEANGGAEANGGAGVDGGDRVLFRVERSLPQHPATLDTKQVLQPSEDTLAKARARLEYEAE RRGQSLPVIPADPPPRTRIALIRRARIASDAPITGITEEHGNRRT >Mature_364_residues SDLHDLPARVFSLIESGVVAEFSTVSAAGIPIDTPTYYFPADDMSTIDLATGLPNPAKAERVRRTSKVGLLIEGRPEEPV VVIRAHGAVRDSDIQANAIRYLAETGYEGISHGITWEEARKAVTYWSRIIIENKPERVYWWDSHAALDDPPQVWSAAPDT VYPTSDPSPARRMKRSAWPVRPWQDVAREAVEGGTPAHLSVLDEDGFPLPMRATSFELTAEGFRLAVPTGTPWRLRGRAS LTFAGFRTFVGDAGADGGAEANGGAEANGGAGVDGGDRVLFRVERSLPQHPATLDTKQVLQPSEDTLAKARARLEYEAER RGQSLPVIPADPPPRTRIALIRRARIASDAPITGITEEHGNRRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39770; Mature: 39639
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLHDLPARVFSLIESGVVAEFSTVSAAGIPIDTPTYYFPADDMSTIDLATGLPNPAKA CCCHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCCCEEECCCCCCEEEHHCCCCCHHHH ERVRRTSKVGLLIEGRPEEPVVVIRAHGAVRDSDIQANAIRYLAETGYEGISHGITWEEA HHHHHHHHCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCHHHHHCCCCHHHH RKAVTYWSRIIIENKPERVYWWDSHAALDDPPQVWSAAPDTVYPTSDPSPARRMKRSAWP HHHHHHHHHHEECCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCCC VRPWQDVAREAVEGGTPAHLSVLDEDGFPLPMRATSFELTAEGFRLAVPTGTPWRLRGRA CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEECCE SLTFAGFRTFVGDAGADGGAEANGGAEANGGAGVDGGDRVLFRVERSLPQHPATLDTKQV EEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCHHHH LQPSEDTLAKARARLEYEAERRGQSLPVIPADPPPRTRIALIRRARIASDAPITGITEEH HCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHCC GNRRT CCCCC >Mature Secondary Structure SDLHDLPARVFSLIESGVVAEFSTVSAAGIPIDTPTYYFPADDMSTIDLATGLPNPAKA CCHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCCCEEECCCCCCEEEHHCCCCCHHHH ERVRRTSKVGLLIEGRPEEPVVVIRAHGAVRDSDIQANAIRYLAETGYEGISHGITWEEA HHHHHHHHCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCHHHHHCCCCHHHH RKAVTYWSRIIIENKPERVYWWDSHAALDDPPQVWSAAPDTVYPTSDPSPARRMKRSAWP HHHHHHHHHHEECCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCCC VRPWQDVAREAVEGGTPAHLSVLDEDGFPLPMRATSFELTAEGFRLAVPTGTPWRLRGRA CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEECCE SLTFAGFRTFVGDAGADGGAEANGGAEANGGAGVDGGDRVLFRVERSLPQHPATLDTKQV EEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCHHHH LQPSEDTLAKARARLEYEAERRGQSLPVIPADPPPRTRIALIRRARIASDAPITGITEEH HCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHCC GNRRT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA