| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315634
Identifier: 158315634
GI number: 158315634
Start: 4566965
End: 4567954
Strand: Reverse
Name: 158315634
Synonym: Franean1_3844
Alternate gene names: NA
Gene position: 4567954-4566965 (Counterclockwise)
Preceding gene: 158315638
Following gene: 158315629
Centisome position: 50.86
GC content: 70.3
Gene sequence:
>990_bases GTGCCGCCAGGCTGGTACGACGACCCGTCAGGGGAGCCCGGCGCTCGATGGTGGGACGGCAACACGTGGACCGACCACAC CCAGCCGGCACCGCCCCCGCAGCCCGCCCCGGCGCACCACGGCCCGGCGCATCCGGGTCAGCAGCGCTCGACTCAGCAGC AGCCCGGGCAGTACCAACAGCAGGGCCAGCCCCAGCAGACCGCGGCTCAGCAGCCGTACGGCCAGCAGCAGTTCGGCCAG CCGGGGCAGCAGGTCCCGTCCCAGAACGGGCCGGGGCCGGGCGGCTGGGGCGGCCCGCAGGGCTACCAGCCGCCGCCCGT GCAGACCAGCCACACCCCGGACCGGGTCCAGCGGCAGGTCCGCGAGCAGGCCGGGGTGCACGTGCCGGCGCAGGGCGGCG GTTCGCTGTTCAGCGAGCCGGTGCTGGTCGTCAACCAGAAGACGAAGCTGATCGAGTTGACGAACGAGTACGCCGTCTTC GACCAGAACGGGAACCAGATCGGCTCGGTCGTCGAGGTCGGCCAGAGCGCGTTGAAGAAGGCCGTGCGCTTCGTGTCGTC GGTCGACCAGTTCCTCACTCACCGGCTTGAGGTGCGTGACGCCGCCGGTGTGCCGCAGCTGGTGCTGACCAGGCCGGCGA AGCTGTTCAAGTCGAAGGTGGTCGTGACGCTGCCCGACGGCCGGGAGGTCGGCAGCATCGTCCAGCAGAACGTGTTCGGC AAGATCCGGTTCGGTCTGGAAGCCGGCGGCGCGACGGTCGGGATGATCAAGGCCGAGAACTGGCGGGCGTGGAACTTCTC CATCGTCGACCAGAACGACACCGAGGTCGCCCGGGTCACCAAGACCTGGGAGGGCCTGGCCCGGACGCTGTTCACCACGG CCGACAACTACGTGGTGCAGATGCACCGGCCGCTGCCGCAGCCGATGCTGAGCCTCGTGGTGGCGTCGGCCCTGACCATC GACACCGCGCTGAAGCAGGACTCGAACTGA
Upstream 100 bases:
>100_bases ACCGGCTGTCGCCCAACCGACGTCCCGGGATGGCCCGGCGTCCTGCCCGGCCACATCCCGGACGACCGGCGAGTGGCAGA GTGGGTACATGTCACAGAGC
Downstream 100 bases:
>100_bases AGCAGAATTTGAAGGGCCTGGGTTGAGCCGGTGGCGCGGGCACCGGCTACCGGTGCCCGCGTCAGCGCTGCTCCGCTCGC TCAGCCGGCCCAGACGGTCT
Product: scramblase family protein
Products: NA
Alternate protein names: Scramblase
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MPPGWYDDPSGEPGARWWDGNTWTDHTQPAPPPQPAPAHHGPAHPGQQRSTQQQPGQYQQQGQPQQTAAQQPYGQQQFGQ PGQQVPSQNGPGPGGWGGPQGYQPPPVQTSHTPDRVQRQVREQAGVHVPAQGGGSLFSEPVLVVNQKTKLIELTNEYAVF DQNGNQIGSVVEVGQSALKKAVRFVSSVDQFLTHRLEVRDAAGVPQLVLTRPAKLFKSKVVVTLPDGREVGSIVQQNVFG KIRFGLEAGGATVGMIKAENWRAWNFSIVDQNDTEVARVTKTWEGLARTLFTTADNYVVQMHRPLPQPMLSLVVASALTI DTALKQDSN
Sequences:
>Translated_329_residues MPPGWYDDPSGEPGARWWDGNTWTDHTQPAPPPQPAPAHHGPAHPGQQRSTQQQPGQYQQQGQPQQTAAQQPYGQQQFGQ PGQQVPSQNGPGPGGWGGPQGYQPPPVQTSHTPDRVQRQVREQAGVHVPAQGGGSLFSEPVLVVNQKTKLIELTNEYAVF DQNGNQIGSVVEVGQSALKKAVRFVSSVDQFLTHRLEVRDAAGVPQLVLTRPAKLFKSKVVVTLPDGREVGSIVQQNVFG KIRFGLEAGGATVGMIKAENWRAWNFSIVDQNDTEVARVTKTWEGLARTLFTTADNYVVQMHRPLPQPMLSLVVASALTI DTALKQDSN >Mature_328_residues PPGWYDDPSGEPGARWWDGNTWTDHTQPAPPPQPAPAHHGPAHPGQQRSTQQQPGQYQQQGQPQQTAAQQPYGQQQFGQP GQQVPSQNGPGPGGWGGPQGYQPPPVQTSHTPDRVQRQVREQAGVHVPAQGGGSLFSEPVLVVNQKTKLIELTNEYAVFD QNGNQIGSVVEVGQSALKKAVRFVSSVDQFLTHRLEVRDAAGVPQLVLTRPAKLFKSKVVVTLPDGREVGSIVQQNVFGK IRFGLEAGGATVGMIKAENWRAWNFSIVDQNDTEVARVTKTWEGLARTLFTTADNYVVQMHRPLPQPMLSLVVASALTID TALKQDSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35799; Mature: 35668
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPGWYDDPSGEPGARWWDGNTWTDHTQPAPPPQPAPAHHGPAHPGQQRSTQQQPGQYQQ CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH QGQPQQTAAQQPYGQQQFGQPGQQVPSQNGPGPGGWGGPQGYQPPPVQTSHTPDRVQRQV CCCCHHHHHCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH REQAGVHVPAQGGGSLFSEPVLVVNQKTKLIELTNEYAVFDQNGNQIGSVVEVGQSALKK HHHHCCCCCCCCCCCHHCCCEEEEECCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHH AVRFVSSVDQFLTHRLEVRDAAGVPQLVLTRPAKLFKSKVVVTLPDGREVGSIVQQNVFG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCEEEECCCCHHHHHHHHHHHHH KIRFGLEAGGATVGMIKAENWRAWNFSIVDQNDTEVARVTKTWEGLARTLFTTADNYVVQ EEEEEEECCCCEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE MHRPLPQPMLSLVVASALTIDTALKQDSN ECCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PPGWYDDPSGEPGARWWDGNTWTDHTQPAPPPQPAPAHHGPAHPGQQRSTQQQPGQYQQ CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH QGQPQQTAAQQPYGQQQFGQPGQQVPSQNGPGPGGWGGPQGYQPPPVQTSHTPDRVQRQV CCCCHHHHHCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH REQAGVHVPAQGGGSLFSEPVLVVNQKTKLIELTNEYAVFDQNGNQIGSVVEVGQSALKK HHHHCCCCCCCCCCCHHCCCEEEEECCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHH AVRFVSSVDQFLTHRLEVRDAAGVPQLVLTRPAKLFKSKVVVTLPDGREVGSIVQQNVFG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCEEEECCCCHHHHHHHHHHHHH KIRFGLEAGGATVGMIKAENWRAWNFSIVDQNDTEVARVTKTWEGLARTLFTTADNYVVQ EEEEEEECCCCEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE MHRPLPQPMLSLVVASALTIDTALKQDSN ECCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA