| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315480
Identifier: 158315480
GI number: 158315480
Start: 4362810
End: 4363349
Strand: Reverse
Name: 158315480
Synonym: Franean1_3685
Alternate gene names: NA
Gene position: 4363349-4362810 (Counterclockwise)
Preceding gene: 158315481
Following gene: 158315477
Centisome position: 48.58
GC content: 67.59
Gene sequence:
>540_bases ATGAGTATCAGTGCCGACGACCTGAGCTTCGTCCTGGACCGTGAACAGATCCGCGACCTCCTCGCCCGGCTGGCCCGGGG CGAGGACCGGCGCGACGCGGATCTGATCAGCGGGGCCTACTGGCCGGACGCGACCGACGACCACGGCATCTTCCGCGGCA CGTTCAAGGAGTACCTGGCGTGGGTCGTGCCCGGCGCGCCCTCGATTCCCGTCACCCTGCACACGCTGGGCCAGACCCTG ATCGACGTCACGGGTGACACCGCGGTGGCCGAGACCCACGTCACCTCCTATCACCGGATCGACTTCGGCGAGGAGGAGCA TGACGTCGTGATCGGCGGCCGTTACGTCGACCGGCTGGAGAAGCGGGACGGGGAGTGGCGCATCGCGCACCGCACCATGC TCTACGACTGGTTCCGGGATTTCGGGCAGTCGGTGGACTGGTCGCAGGGGGTCATGGGCACCCCGTTCCTCGCCGACCAC TACGTGGGCAGCGCGAACGGCGACCACAGCGTCACGTTGTTCCAGCAGAAATCCCGCTGA
Upstream 100 bases:
>100_bases CGCAAGCCGCAGATTCCCTAGGCCAGGCCAGGCCGGGGCAGCCCAGGCCAGGGCGGCCGCCGCCCGTTCCACCCTTCGCC AACCACGAGGTGAGCCGGAT
Downstream 100 bases:
>100_bases CCCCGCGCGCCCGCAGCGCCGTCCCGTCCGGATCGACACCCCAGCTGATGATCCGGACGGGATGGATGCGGATGACCTCG CGGCTGAGATGGCGCTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSISADDLSFVLDREQIRDLLARLARGEDRRDADLISGAYWPDATDDHGIFRGTFKEYLAWVVPGAPSIPVTLHTLGQTL IDVTGDTAVAETHVTSYHRIDFGEEEHDVVIGGRYVDRLEKRDGEWRIAHRTMLYDWFRDFGQSVDWSQGVMGTPFLADH YVGSANGDHSVTLFQQKSR
Sequences:
>Translated_179_residues MSISADDLSFVLDREQIRDLLARLARGEDRRDADLISGAYWPDATDDHGIFRGTFKEYLAWVVPGAPSIPVTLHTLGQTL IDVTGDTAVAETHVTSYHRIDFGEEEHDVVIGGRYVDRLEKRDGEWRIAHRTMLYDWFRDFGQSVDWSQGVMGTPFLADH YVGSANGDHSVTLFQQKSR >Mature_178_residues SISADDLSFVLDREQIRDLLARLARGEDRRDADLISGAYWPDATDDHGIFRGTFKEYLAWVVPGAPSIPVTLHTLGQTLI DVTGDTAVAETHVTSYHRIDFGEEEHDVVIGGRYVDRLEKRDGEWRIAHRTMLYDWFRDFGQSVDWSQGVMGTPFLADHY VGSANGDHSVTLFQQKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20270; Mature: 20138
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISADDLSFVLDREQIRDLLARLARGEDRRDADLISGAYWPDATDDHGIFRGTFKEYLA CCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH WVVPGAPSIPVTLHTLGQTLIDVTGDTAVAETHVTSYHRIDFGEEEHDVVIGGRYVDRLE HHCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCCCCEEECHHHHHHHH KRDGEWRIAHRTMLYDWFRDFGQSVDWSQGVMGTPFLADHYVGSANGDHSVTLFQQKSR HCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure SISADDLSFVLDREQIRDLLARLARGEDRRDADLISGAYWPDATDDHGIFRGTFKEYLA CCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH WVVPGAPSIPVTLHTLGQTLIDVTGDTAVAETHVTSYHRIDFGEEEHDVVIGGRYVDRLE HHCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCCCCEEECHHHHHHHH KRDGEWRIAHRTMLYDWFRDFGQSVDWSQGVMGTPFLADHYVGSANGDHSVTLFQQKSR HCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]