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The map label for this gene is ycdM [C]

Identifier: 158315181

GI number: 158315181

Start: 4006202

End: 4007215

Strand: Direct

Name: ycdM [C]

Synonym: Franean1_3381

Alternate gene names: 158315181

Gene position: 4006202-4007215 (Clockwise)

Preceding gene: 158315179

Following gene: 158315183

Centisome position: 44.6

GC content: 68.74

Gene sequence:

>1014_bases
ATGGGCGAGCCGAGCGAGGCTCATCCGTCACCGGCGCGGCCGATCCGGTTCAACACCGGCCCGGGCCGGATCTCCGACCT
CGCGGCGCTCCGGGAGGCTGGGCAGGCCATCGAGGGTCTCGGCTACTCGACCTTCGCTCTCGCCGACCATTTCATGATCC
GGTACGCTCCGCTGATCGCGCTCCAGGCGGTCGCCGACGCGACCAGCACGCTGCGGCTGACCCAGACTGTCCTCAACCAG
GATCTACGGCATCCCGCCGTCCTCGCCAAGGAACTCGCCACCCTGGACGTGCTGTCCCAGGGGCGTCTGCAGGTGGGGCT
CGGCGCGGGATGGATGCAGGCCGAGTACCAACAGGCCGGCATCCGGTACGACCCGGCCGCCGCGCGGATCGCGCGGCTCG
AGGAAGTGGTCATCATCCTGAAAGGCCTGTTCGGAGATGATCCGTTCAGCTACTCAGGCGCGAACTTCACGATTGATGCT
CTTCGTGGCACCCCGCGGCCTCTGCAGCGTCCGCACCCGCCGATCATGATCGGCGGCGGTGGCCGCAAGCTGCTCTCGGT
CGCCGGGCGCCATGCCGACATCGTGCAGATCATGCCCCGGCTTCCGCAGGAGGTCCGGCCGGCCGAACCGCACCCGTTCA
GCGGCGAGGCCTACGAGGAGAGAATCGGCTGGGTCCGCGCTGCCGCCGGGGACCGCTTCGGCGACATCGAGCTGGGAGCC
CAACTGCTGAACGTGACGATCACCGATGATCCGGAAGCGGCGTTTGAGGCCTGCTTTCAGAGCTTTGGCCGGCAGGTCCG
AGGATCGTCCGGGGGCGCCGTCCCGTCGCGAGCGGACCTCGGCTCGTCGCCGATGGTGGCCATCGGTTCGCTGGACGACG
TCTGCCGGAAAATCCTGGACATCCGTGACCGGTTCGGGATCAGTTACTTCACAACGCCGCTCGGTGCGAGCCCCGAATCC
TTCGCACCGGTCGTGGAACGGCTGGCGGACGCGCCAGCCGGCGCCGCGGCGTGA

Upstream 100 bases:

>100_bases
GGTGAGGTGGCCCCTTGCGCAGTCGATGCCGCTGGAGCGGAGAGCGGGACGAGTGATGGCGGAGCCCGCGAAGGCCTACC
CGAGGCCGAGGACGCTGGTC

Downstream 100 bases:

>100_bases
CTCCGGCGGGAGCCACCGACCCTTCGGTCCTGCGGCGCGAGCCGGCGGAACAGGCAGCGGCGCAGGCGGCCGAGATCAGG
CCCCACGCTGTGGCGGGGAG

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MGEPSEAHPSPARPIRFNTGPGRISDLAALREAGQAIEGLGYSTFALADHFMIRYAPLIALQAVADATSTLRLTQTVLNQ
DLRHPAVLAKELATLDVLSQGRLQVGLGAGWMQAEYQQAGIRYDPAAARIARLEEVVIILKGLFGDDPFSYSGANFTIDA
LRGTPRPLQRPHPPIMIGGGGRKLLSVAGRHADIVQIMPRLPQEVRPAEPHPFSGEAYEERIGWVRAAAGDRFGDIELGA
QLLNVTITDDPEAAFEACFQSFGRQVRGSSGGAVPSRADLGSSPMVAIGSLDDVCRKILDIRDRFGISYFTTPLGASPES
FAPVVERLADAPAGAAA

Sequences:

>Translated_337_residues
MGEPSEAHPSPARPIRFNTGPGRISDLAALREAGQAIEGLGYSTFALADHFMIRYAPLIALQAVADATSTLRLTQTVLNQ
DLRHPAVLAKELATLDVLSQGRLQVGLGAGWMQAEYQQAGIRYDPAAARIARLEEVVIILKGLFGDDPFSYSGANFTIDA
LRGTPRPLQRPHPPIMIGGGGRKLLSVAGRHADIVQIMPRLPQEVRPAEPHPFSGEAYEERIGWVRAAAGDRFGDIELGA
QLLNVTITDDPEAAFEACFQSFGRQVRGSSGGAVPSRADLGSSPMVAIGSLDDVCRKILDIRDRFGISYFTTPLGASPES
FAPVVERLADAPAGAAA
>Mature_336_residues
GEPSEAHPSPARPIRFNTGPGRISDLAALREAGQAIEGLGYSTFALADHFMIRYAPLIALQAVADATSTLRLTQTVLNQD
LRHPAVLAKELATLDVLSQGRLQVGLGAGWMQAEYQQAGIRYDPAAARIARLEEVVIILKGLFGDDPFSYSGANFTIDAL
RGTPRPLQRPHPPIMIGGGGRKLLSVAGRHADIVQIMPRLPQEVRPAEPHPFSGEAYEERIGWVRAAAGDRFGDIELGAQ
LLNVTITDDPEAAFEACFQSFGRQVRGSSGGAVPSRADLGSSPMVAIGSLDDVCRKILDIRDRFGISYFTTPLGASPESF
APVVERLADAPAGAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 35943; Mature: 35812

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEPSEAHPSPARPIRFNTGPGRISDLAALREAGQAIEGLGYSTFALADHFMIRYAPLIA
CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LQAVADATSTLRLTQTVLNQDLRHPAVLAKELATLDVLSQGRLQVGLGAGWMQAEYQQAG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCC
IRYDPAAARIARLEEVVIILKGLFGDDPFSYSGANFTIDALRGTPRPLQRPHPPIMIGGG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCC
GRKLLSVAGRHADIVQIMPRLPQEVRPAEPHPFSGEAYEERIGWVRAAAGDRFGDIELGA
CHHHHHHHCCCHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCC
QLLNVTITDDPEAAFEACFQSFGRQVRGSSGGAVPSRADLGSSPMVAIGSLDDVCRKILD
EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHH
IRDRFGISYFTTPLGASPESFAPVVERLADAPAGAAA
HHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GEPSEAHPSPARPIRFNTGPGRISDLAALREAGQAIEGLGYSTFALADHFMIRYAPLIA
CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LQAVADATSTLRLTQTVLNQDLRHPAVLAKELATLDVLSQGRLQVGLGAGWMQAEYQQAG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCC
IRYDPAAARIARLEEVVIILKGLFGDDPFSYSGANFTIDALRGTPRPLQRPHPPIMIGGG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCC
GRKLLSVAGRHADIVQIMPRLPQEVRPAEPHPFSGEAYEERIGWVRAAAGDRFGDIELGA
CHHHHHHHCCCHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCC
QLLNVTITDDPEAAFEACFQSFGRQVRGSSGGAVPSRADLGSSPMVAIGSLDDVCRKILD
EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHH
IRDRFGISYFTTPLGASPESFAPVVERLADAPAGAAA
HHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]