Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315179

Identifier: 158315179

GI number: 158315179

Start: 4004913

End: 4005659

Strand: Direct

Name: 158315179

Synonym: Franean1_3379

Alternate gene names: NA

Gene position: 4004913-4005659 (Clockwise)

Preceding gene: 158315178

Following gene: 158315181

Centisome position: 44.59

GC content: 66.67

Gene sequence:

>747_bases
ATGGATATCGGGAGATACTCGAGAAGCGCGTTTCTTACCGGCGGACTGTCCGCGGCAGCCCTGCTGTTGGCGACTCCCGC
GTCGGCGAGTACTGTTTCCGCCGATCCACCGAAGGAGGGGAAGAAGGGGGCGAGCTCGGCTGCGGCTCCGATTTGCTGGG
GAAGCGGTGGCGGAGTGCCCGGGAACACCGGAAACGGTGTGACGTGCTACCAGCTCGTTCCCGCTGATGAAGCCACGACA
GCGGCGTGGTCGCAGTCGCAGGCCGGCCCATGCCTCGTGGATCCGGCCGGTGGGGCGGTGGACTCGGACGGGGACGACCT
GTTCGAGGACGACTGGTTCAATGAAAAGCGGACGGTCAACCTGATCATCGGAAGTCTCACGATCGGTGGCCTTGGGCCGA
CTGTGGGCGGCACCGGAATCGTCGGTGGAACGGGGAACACGGCCGGCGGTACGACTGCCGCATTCGGGGGGATCGCCGCG
GGCGGGACCACCGTCGGCGGGTCCGGTAACTCCGGCAACATCGGGGGAACCACGATCAACGCCCCGGCCGCCGCCGACAC
GGCCGCTGTCGCAGGTCCTCGACCGGTGATCGTCGGGTCTGGTCAGCAGTGTTCGGTCGGCTCGACTGGATCCGGTCAGG
CGCCCACCACAGGCCTTCAGGATCAGCAGGGCGCTACGGAAGGCGAGTGGGCGATCCTCGAGGACAACGACCCGACCGAA
TGGGAGATTTCCCTTCCTGAGCTGTGA

Upstream 100 bases:

>100_bases
TCGTCGACACGCGGGTAGCAGGGTTGCCGGGGTGGCCGGAGATTCACTGGCTACCATCGCGCGGTGCTGGTCGTGGACCT
TCGCTCGAACAAGGAGCCAA

Downstream 100 bases:

>100_bases
AGGGGTGCTACTCGAGGATCCCGCTGGGGCGTGTATCCAGTTGTGATCTATCTGTGGGATTCGCTCTCGTGGCGGGGCCT
GAGCCGGTAGATCGTCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDIGRYSRSAFLTGGLSAAALLLATPASASTVSADPPKEGKKGASSAAAPICWGSGGGVPGNTGNGVTCYQLVPADEATT
AAWSQSQAGPCLVDPAGGAVDSDGDDLFEDDWFNEKRTVNLIIGSLTIGGLGPTVGGTGIVGGTGNTAGGTTAAFGGIAA
GGTTVGGSGNSGNIGGTTINAPAAADTAAVAGPRPVIVGSGQQCSVGSTGSGQAPTTGLQDQQGATEGEWAILEDNDPTE
WEISLPEL

Sequences:

>Translated_248_residues
MDIGRYSRSAFLTGGLSAAALLLATPASASTVSADPPKEGKKGASSAAAPICWGSGGGVPGNTGNGVTCYQLVPADEATT
AAWSQSQAGPCLVDPAGGAVDSDGDDLFEDDWFNEKRTVNLIIGSLTIGGLGPTVGGTGIVGGTGNTAGGTTAAFGGIAA
GGTTVGGSGNSGNIGGTTINAPAAADTAAVAGPRPVIVGSGQQCSVGSTGSGQAPTTGLQDQQGATEGEWAILEDNDPTE
WEISLPEL
>Mature_248_residues
MDIGRYSRSAFLTGGLSAAALLLATPASASTVSADPPKEGKKGASSAAAPICWGSGGGVPGNTGNGVTCYQLVPADEATT
AAWSQSQAGPCLVDPAGGAVDSDGDDLFEDDWFNEKRTVNLIIGSLTIGGLGPTVGGTGIVGGTGNTAGGTTAAFGGIAA
GGTTVGGSGNSGNIGGTTINAPAAADTAAVAGPRPVIVGSGQQCSVGSTGSGQAPTTGLQDQQGATEGEWAILEDNDPTE
WEISLPEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23895; Mature: 23895

Theoretical pI: Translated: 3.71; Mature: 3.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIGRYSRSAFLTGGLSAAALLLATPASASTVSADPPKEGKKGASSAAAPICWGSGGGVP
CCCCCCCCCEEEECCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
GNTGNGVTCYQLVPADEATTAAWSQSQAGPCLVDPAGGAVDSDGDDLFEDDWFNEKRTVN
CCCCCCEEEEEEECCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
LIIGSLTIGGLGPTVGGTGIVGGTGNTAGGTTAAFGGIAAGGTTVGGSGNSGNIGGTTIN
EEEEEEEECCCCCCCCCCEEECCCCCCCCCCHHHCCCEECCCEEECCCCCCCCCCCEEEC
APAAADTAAVAGPRPVIVGSGQQCSVGSTGSGQAPTTGLQDQQGATEGEWAILEDNDPTE
CCCCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE
WEISLPEL
EEEECCCC
>Mature Secondary Structure
MDIGRYSRSAFLTGGLSAAALLLATPASASTVSADPPKEGKKGASSAAAPICWGSGGGVP
CCCCCCCCCEEEECCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
GNTGNGVTCYQLVPADEATTAAWSQSQAGPCLVDPAGGAVDSDGDDLFEDDWFNEKRTVN
CCCCCCEEEEEEECCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
LIIGSLTIGGLGPTVGGTGIVGGTGNTAGGTTAAFGGIAAGGTTVGGSGNSGNIGGTTIN
EEEEEEEECCCCCCCCCCEEECCCCCCCCCCHHHCCCEECCCEEECCCCCCCCCCCEEEC
APAAADTAAVAGPRPVIVGSGQQCSVGSTGSGQAPTTGLQDQQGATEGEWAILEDNDPTE
CCCCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE
WEISLPEL
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA