| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mlhB [H]
Identifier: 158315033
GI number: 158315033
Start: 3814656
End: 3815651
Strand: Direct
Name: mlhB [H]
Synonym: Franean1_3228
Alternate gene names: 158315033
Gene position: 3814656-3815651 (Clockwise)
Preceding gene: 158315032
Following gene: 158315034
Centisome position: 42.47
GC content: 70.28
Gene sequence:
>996_bases ATGAGCGCTGATATCGCGCAACCGGCGATGCGTGTGCCGGAAAGAGAGATCCCGGTGCCCCCGACGGTGAGTCCCGAGGG CCAGGCGATGCTGGCACTGGGCATGGTAGGGCCGGAGCCGGAGTGGAACGGCGTCGAGCTCGACGCGGCCGGGTGGAAGA AGCTGATCGCCGAGCGCGAGGCAGCTGTGATCGCCATGACCGGGGTGGGCGGTGCGTACGTCGGAGCCGAGGTCGAGGAG GAGGACCTGGGTGGCTTCGTGGTCTTCAAGATTCGTCCGGACGGGGTGGCGGTGGACGATCGCCGGGTCTACCTCGACTT CCACGGCGGCGGCTTCATTCAGGACGGCGGCCAGATCGCCTGCTCCCGTGCGGTCGACGAGGCCCGGCGCCTCGGGGCCG CTGTCTGGTCGGTCGACTACCGGATGCCGCCCGACCACCCGTTCCCGGCCGGAGTCGACGACGGCGTAGCGGCCTACCGG CGACTGCTCGAGGTGCGGCGGCCGGAGGAGATCGTCATCGGCGGTTCGTCGGCCGGCGGGAACCTGGCGGCGGCGACGAT CCTCAAGGCCCGCGACGGGGGCCTGCCGCTGCCGGCGGCGGCGGTACTGAACACCCCCTGCACCGACCTGACGGAAAGCA GCGACAGCTGGTGGACGAACGAGGGCGTCGACACCGTGCTGCGCGGCGGCTTCAAGCCCGCCTTCGAGCTCTGGGCGGGT GGCCACGACCTGAGGAATCCCTATATCTCGGTGGTGTACGCCGACCTCACCAAGGGATTCCCACCGACCATTCTCACCAC CGGTACCCGCGACAGGCTGCTGTCCGACACGGTGCGTTTCCACCGGGCCCTGCTCCGGGCCGGCATGCAGGCCGAACTGC ACGTCTGGGAAGCCATGGGGCACGCCGGATTCCTTGGGACGTCGCCGGAGGACGCCGAGCGTGCCGCTGAGATCCGCCGG TTCTGCGCCGCTCACTGGGCGGCTGACGCGGCCTGA
Upstream 100 bases:
>100_bases CGGCGAGACCTCCGGGCCGGTGTGCGGGTGGCGGAGCGAGTGGCCGACACGCAGTGACAAGAGGCGTGAGGAACGAACCG AAGAACAAGGAGAGCAGACG
Downstream 100 bases:
>100_bases TCGGGACCGCGTTTCATGACAATCCCGCGAGCATGCAAAGGAGAAGCTATGAGTTACCGAGTCGAGAAGAACGTCATGGT TCCGATGCGGGACGACGTGA
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSADIAQPAMRVPEREIPVPPTVSPEGQAMLALGMVGPEPEWNGVELDAAGWKKLIAEREAAVIAMTGVGGAYVGAEVEE EDLGGFVVFKIRPDGVAVDDRRVYLDFHGGGFIQDGGQIACSRAVDEARRLGAAVWSVDYRMPPDHPFPAGVDDGVAAYR RLLEVRRPEEIVIGGSSAGGNLAAATILKARDGGLPLPAAAVLNTPCTDLTESSDSWWTNEGVDTVLRGGFKPAFELWAG GHDLRNPYISVVYADLTKGFPPTILTTGTRDRLLSDTVRFHRALLRAGMQAELHVWEAMGHAGFLGTSPEDAERAAEIRR FCAAHWAADAA
Sequences:
>Translated_331_residues MSADIAQPAMRVPEREIPVPPTVSPEGQAMLALGMVGPEPEWNGVELDAAGWKKLIAEREAAVIAMTGVGGAYVGAEVEE EDLGGFVVFKIRPDGVAVDDRRVYLDFHGGGFIQDGGQIACSRAVDEARRLGAAVWSVDYRMPPDHPFPAGVDDGVAAYR RLLEVRRPEEIVIGGSSAGGNLAAATILKARDGGLPLPAAAVLNTPCTDLTESSDSWWTNEGVDTVLRGGFKPAFELWAG GHDLRNPYISVVYADLTKGFPPTILTTGTRDRLLSDTVRFHRALLRAGMQAELHVWEAMGHAGFLGTSPEDAERAAEIRR FCAAHWAADAA >Mature_330_residues SADIAQPAMRVPEREIPVPPTVSPEGQAMLALGMVGPEPEWNGVELDAAGWKKLIAEREAAVIAMTGVGGAYVGAEVEEE DLGGFVVFKIRPDGVAVDDRRVYLDFHGGGFIQDGGQIACSRAVDEARRLGAAVWSVDYRMPPDHPFPAGVDDGVAAYRR LLEVRRPEEIVIGGSSAGGNLAAATILKARDGGLPLPAAAVLNTPCTDLTESSDSWWTNEGVDTVLRGGFKPAFELWAGG HDLRNPYISVVYADLTKGFPPTILTTGTRDRLLSDTVRFHRALLRAGMQAELHVWEAMGHAGFLGTSPEDAERAAEIRRF CAAHWAADAA
Specific function: Lactone hydrolase that is required for the degradation of monocyclic monoterpenes such as menthol and carvone. Catalyzes the ring opening of lactones formed during degradation of monocyclic monoterpenes. Can hydrolyze epsilon-caprolactone, the lactone der
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.83 [H]
Molecular weight: Translated: 35394; Mature: 35263
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00226 IF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADIAQPAMRVPEREIPVPPTVSPEGQAMLALGMVGPEPEWNGVELDAAGWKKLIAERE CCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHHHHCC AAVIAMTGVGGAYVGAEVEEEDLGGFVVFKIRPDGVAVDDRRVYLDFHGGGFIQDGGQIA CEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCEEECCCEEEEEECCCCEEECCCCCH CSRAVDEARRLGAAVWSVDYRMPPDHPFPAGVDDGVAAYRRLLEVRRPEEIVIGGSSAGG HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC NLAAATILKARDGGLPLPAAAVLNTPCTDLTESSDSWWTNEGVDTVLRGGFKPAFELWAG CEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCC GHDLRNPYISVVYADLTKGFPPTILTTGTRDRLLSDTVRFHRALLRAGMQAELHVWEAMG CCHHCCCEEEEEEEHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC HAGFLGTSPEDAERAAEIRRFCAAHWAADAA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SADIAQPAMRVPEREIPVPPTVSPEGQAMLALGMVGPEPEWNGVELDAAGWKKLIAERE CCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHHHHCC AAVIAMTGVGGAYVGAEVEEEDLGGFVVFKIRPDGVAVDDRRVYLDFHGGGFIQDGGQIA CEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCEEECCCEEEEEECCCCEEECCCCCH CSRAVDEARRLGAAVWSVDYRMPPDHPFPAGVDDGVAAYRRLLEVRRPEEIVIGGSSAGG HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC NLAAATILKARDGGLPLPAAAVLNTPCTDLTESSDSWWTNEGVDTVLRGGFKPAFELWAG CEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCC GHDLRNPYISVVYADLTKGFPPTILTTGTRDRLLSDTVRFHRALLRAGMQAELHVWEAMG CCHHCCCEEEEEEEHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC HAGFLGTSPEDAERAAEIRRFCAAHWAADAA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA