| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314942
Identifier: 158314942
GI number: 158314942
Start: 3687575
End: 3688279
Strand: Direct
Name: 158314942
Synonym: Franean1_3133
Alternate gene names: NA
Gene position: 3687575-3688279 (Clockwise)
Preceding gene: 158314941
Following gene: 158314943
Centisome position: 41.05
GC content: 68.94
Gene sequence:
>705_bases ATGACAGGGATACGGTCCGGCGATGACGTCCGACGGGTTGGTGTGCTGATCGAGGCGTCCCACCGCACAATCGAGTCCGC CCTGTGGTCGGCGCTGCCGCCTGGTGTCACCCTCACCACCGCGCGGGTCTCGGACCCGGCCCGACCCGGGTCGCAGGACC ACGGTGGCGAGCACCTCGACCCGTTGGTGGCCGGTCTGGACAGTGTCATGACGACGGAGCCGCAGGCCGTGGTGGTGGCC ATCGAGAGCGCGGGCTTGGGCTCCGGTCTGGCCGGTCTGCGTGACATCGAGCATTCCCTGTCCGCGCATGCCCAGGTCCC TGTCGTCACCGTGAGCGGGGCGGTGGTCGAGTGGTTGCTGGTGCGCCCGTGGCTGCGGAACCTTGCCCTCGTCGCTCCTG TCGACCCGTGGGTGCACGAACAGTTTGTCCGGGTGCTGCGCGAGGCGTCCCTGCAGGTCGGTATCGGTGCGGACGAGCCT CTCGTCGAAGCGTTGGCGACATCTCAGCGGGTTGTCGGAGCCTACCGGGCCTGCGCGGCCTCAGGTCCCGACGTCATCGT CCAATGGGGCGGTCAGGTCTTCCCTGATGTCGTCGGCGGCCTCTCGCAGTGGACGAGATCGCCCGTCGTGTGGAGCGTCC ACGCCCTCCTGGAGGTCACCCTCGACCGCATGTCACGCAGCACGCCCCGATTCGCTGTGCCGTAG
Upstream 100 bases:
>100_bases CGACCGGGCTGTGGGCTGCTCTTCGCAGCTGTGGACGATCAGACCAGCTGCGCGGGGGACGGTTATGGCGAGACCACTGA GCTCGGGACGGGTGACGGGG
Downstream 100 bases:
>100_bases GCCGATCACGACATGCGCGAACGCCCCGGCCCGAGTCCACCACCCGCGAGTCGACCCGACCGAGTTCGAGTCACCGGCTG GCAGCCGGTGAAGCCCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTGIRSGDDVRRVGVLIEASHRTIESALWSALPPGVTLTTARVSDPARPGSQDHGGEHLDPLVAGLDSVMTTEPQAVVVA IESAGLGSGLAGLRDIEHSLSAHAQVPVVTVSGAVVEWLLVRPWLRNLALVAPVDPWVHEQFVRVLREASLQVGIGADEP LVEALATSQRVVGAYRACAASGPDVIVQWGGQVFPDVVGGLSQWTRSPVVWSVHALLEVTLDRMSRSTPRFAVP
Sequences:
>Translated_234_residues MTGIRSGDDVRRVGVLIEASHRTIESALWSALPPGVTLTTARVSDPARPGSQDHGGEHLDPLVAGLDSVMTTEPQAVVVA IESAGLGSGLAGLRDIEHSLSAHAQVPVVTVSGAVVEWLLVRPWLRNLALVAPVDPWVHEQFVRVLREASLQVGIGADEP LVEALATSQRVVGAYRACAASGPDVIVQWGGQVFPDVVGGLSQWTRSPVVWSVHALLEVTLDRMSRSTPRFAVP >Mature_233_residues TGIRSGDDVRRVGVLIEASHRTIESALWSALPPGVTLTTARVSDPARPGSQDHGGEHLDPLVAGLDSVMTTEPQAVVVAI ESAGLGSGLAGLRDIEHSLSAHAQVPVVTVSGAVVEWLLVRPWLRNLALVAPVDPWVHEQFVRVLREASLQVGIGADEPL VEALATSQRVVGAYRACAASGPDVIVQWGGQVFPDVVGGLSQWTRSPVVWSVHALLEVTLDRMSRSTPRFAVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24797; Mature: 24665
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIRSGDDVRRVGVLIEASHRTIESALWSALPPGVTLTTARVSDPARPGSQDHGGEHLD CCCCCCCCHHHHHHHEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHH PLVAGLDSVMTTEPQAVVVAIESAGLGSGLAGLRDIEHSLSAHAQVPVVTVSGAVVEWLL HHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHH VRPWLRNLALVAPVDPWVHEQFVRVLREASLQVGIGADEPLVEALATSQRVVGAYRACAA HHHHHHCCEEECCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHC SGPDVIVQWGGQVFPDVVGGLSQWTRSPVVWSVHALLEVTLDRMSRSTPRFAVP CCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TGIRSGDDVRRVGVLIEASHRTIESALWSALPPGVTLTTARVSDPARPGSQDHGGEHLD CCCCCCCHHHHHHHEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHH PLVAGLDSVMTTEPQAVVVAIESAGLGSGLAGLRDIEHSLSAHAQVPVVTVSGAVVEWLL HHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHH VRPWLRNLALVAPVDPWVHEQFVRVLREASLQVGIGADEPLVEALATSQRVVGAYRACAA HHHHHHCCEEECCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHC SGPDVIVQWGGQVFPDVVGGLSQWTRSPVVWSVHALLEVTLDRMSRSTPRFAVP CCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA