| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314941
Identifier: 158314941
GI number: 158314941
Start: 3686835
End: 3687554
Strand: Direct
Name: 158314941
Synonym: Franean1_3132
Alternate gene names: NA
Gene position: 3686835-3687554 (Clockwise)
Preceding gene: 158314940
Following gene: 158314942
Centisome position: 41.05
GC content: 64.44
Gene sequence:
>720_bases TTGACGATCCATGTGGGAGTGATGGTCCCGTCATTGAACACGGTCATCGAGAGGGAATGGCACGATCTGGCCCCTGCGGG AGTGCACGTCCACCTGGAGCGAATCCATGTGACGCAGACAGAGGTGTCCGACGATGACGGCTTCGCGACGCTCTACGGTC AGGTGACCGGCGGTATGGCCCAGAGCCTGTCGCGACTGGAGGAGTGTCGGCCTGACCGGATCGTGCTGGGCATGGTGTCG GTGTTCTACGGAGGTGCCGGGGGCTCCAAGGCTCTAGTCGAGGATCTCCAGCGCCGTACCGACATCGAGCTCATCGCCGC ATCGCACGCCATCGTGACCGCCCTGCGCGAGATGGGGGTGGAGCGGGTGGGGATCCTCAACCCCTACCAGCGATTGGACG ATGGTCAGGTGGAACGCTTCTTCGTCGAGTCTGGTTTCGATCTGACCGGCATCAGCGGCCTGCCCGACGACTCGATCCGA GGCATTCCGCGAACTCCTGTCGAGGACCTGGTGGCGTGCCTCCTCCGGCTGGCGGAGACAGGTCCGCAGGCCATCGTGCA AGTCGGGGCGAACCTGGGGATCGTTGACCTCCTGGATCCGGCCGAGGCTTGGCTCGACATCCCCGTGCTCTCTTCCAACG CGACCGGGCTGTGGGCTGCTCTTCGCAGCTGTGGACGATCAGACCAGCTGCGCGGGGGACGGTTATGGCGAGACCACTGA
Upstream 100 bases:
>100_bases ACGACGACGCCGTCGTGGGCGTCTGAGGGCGTACTCGTCGTGGCACTCGTCCGTCCGGCGGTTCAGTTCCTGCACGCATC CGACTCCGAAGGACTCAACG
Downstream 100 bases:
>100_bases GCTCGGGACGGGTGACGGGGATGACAGGGATACGGTCCGGCGATGACGTCCGACGGGTTGGTGTGCTGATCGAGGCGTCC CACCGCACAATCGAGTCCGC
Product: Asp/Glu racemase
Products: NA
Alternate protein names: Arylmalonate Decarboxylase; Asp/Glu/Hydantoin Racemase; Asp/Glu Racemase; Maleate Cis-Trans Isomerase; Asp/Glu/Hydantoin Racemase Superfamily Protein; Ectoine Utilization Protein EutA; IgiC Protein; Maleate Cis-Trans Isomerase-Like Protein
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTIHVGVMVPSLNTVIEREWHDLAPAGVHVHLERIHVTQTEVSDDDGFATLYGQVTGGMAQSLSRLEECRPDRIVLGMVS VFYGGAGGSKALVEDLQRRTDIELIAASHAIVTALREMGVERVGILNPYQRLDDGQVERFFVESGFDLTGISGLPDDSIR GIPRTPVEDLVACLLRLAETGPQAIVQVGANLGIVDLLDPAEAWLDIPVLSSNATGLWAALRSCGRSDQLRGGRLWRDH
Sequences:
>Translated_239_residues MTIHVGVMVPSLNTVIEREWHDLAPAGVHVHLERIHVTQTEVSDDDGFATLYGQVTGGMAQSLSRLEECRPDRIVLGMVS VFYGGAGGSKALVEDLQRRTDIELIAASHAIVTALREMGVERVGILNPYQRLDDGQVERFFVESGFDLTGISGLPDDSIR GIPRTPVEDLVACLLRLAETGPQAIVQVGANLGIVDLLDPAEAWLDIPVLSSNATGLWAALRSCGRSDQLRGGRLWRDH >Mature_238_residues TIHVGVMVPSLNTVIEREWHDLAPAGVHVHLERIHVTQTEVSDDDGFATLYGQVTGGMAQSLSRLEECRPDRIVLGMVSV FYGGAGGSKALVEDLQRRTDIELIAASHAIVTALREMGVERVGILNPYQRLDDGQVERFFVESGFDLTGISGLPDDSIRG IPRTPVEDLVACLLRLAETGPQAIVQVGANLGIVDLLDPAEAWLDIPVLSSNATGLWAALRSCGRSDQLRGGRLWRDH
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25940; Mature: 25809
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIHVGVMVPSLNTVIEREWHDLAPAGVHVHLERIHVTQTEVSDDDGFATLYGQVTGGMA CEEEEEEEECCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCEEEEEHHHHHHHH QSLSRLEECRPDRIVLGMVSVFYGGAGGSKALVEDLQRRTDIELIAASHAIVTALREMGV HHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH ERVGILNPYQRLDDGQVERFFVESGFDLTGISGLPDDSIRGIPRTPVEDLVACLLRLAET HHCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC GPQAIVQVGANLGIVDLLDPAEAWLDIPVLSSNATGLWAALRSCGRSDQLRGGRLWRDH CHHHHHHHCCCCCEEECCCHHHHHEECEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TIHVGVMVPSLNTVIEREWHDLAPAGVHVHLERIHVTQTEVSDDDGFATLYGQVTGGMA EEEEEEEECCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCEEEEEHHHHHHHH QSLSRLEECRPDRIVLGMVSVFYGGAGGSKALVEDLQRRTDIELIAASHAIVTALREMGV HHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH ERVGILNPYQRLDDGQVERFFVESGFDLTGISGLPDDSIRGIPRTPVEDLVACLLRLAET HHCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC GPQAIVQVGANLGIVDLLDPAEAWLDIPVLSSNATGLWAALRSCGRSDQLRGGRLWRDH CHHHHHHHCCCCCEEECCCHHHHHEECEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA