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The map label for this gene is yngJ [H]

Identifier: 158314542

GI number: 158314542

Start: 3217187

End: 3218338

Strand: Direct

Name: yngJ [H]

Synonym: Franean1_2718

Alternate gene names: 158314542

Gene position: 3217187-3218338 (Clockwise)

Preceding gene: 158314540

Following gene: 158314543

Centisome position: 35.82

GC content: 70.66

Gene sequence:

>1152_bases
ATGAAAGTGGGATTGAGCGTCGACCAGGAACTCCTGGTCGGCACGACCCGGAAGTTCCTGCAGGACAGCGTGCCCAGCGA
GGCTCTGCGCGGCCTTCGGCACCACCCGGCGGGGTACGAGCCGGAGTACTGGAGGACAGGGGCCGAGCTGGGCTGGACCT
CGCTGCTGGTCGCCGAGCAGCACGGCGGCGGGAGCGTCAGTGGTGAGGGTCTGCGTGACCTGGCACTGGTCGCGTACGAG
TTCGGGCGCCAGGCGGCGCCCGGTCCGCTGCTGGCGACGAACGTCGTCGCCGCCGCGCTGTCGCGGGCCGGTGGGGAGCT
GTGCCGGGAGGTGCTGGGCCGGATCAGCGCCGGTGACGCCGTCGGCGCATGGTGCCTCAGCGAGCCGGTGCCCCATGACG
GGCTGGGTGAGGTCACCGCGACCGCCGTCGCGTCGGGTGCCGACTGGGTGCTCTCGGGTGAGAAGAGGCCGGTGGAGCAC
GGAGCCCAGGCGGAGTTCTTCCTGGTCACGGCTCGGACCGGCGACGGTCTCACGCAGCTCCTCGTCCCCGCGGAGAGCTC
GGGAGTGACGGTCACGCCCCTGAGGACGGTCGACCTCTCTCGCCGGTTCGCCCGGGTCGGCTTCCGCGATGTCCGGGTTC
CGGCGACGGCTGTCGTGGGCGAGCCGGGCTCGGCGGCGGCCGAGGTCGAACGTCAGCTGCACACAGCCCTTGTCATTCAG
ACGGCCGAGACGGTCGGAGCGATGGACCAGGCATTCGAGCTGACGCTCGCCTGGGCGGCGGACCGGTACTCGTTCGGCCG
GCCGCTGGCCTCCTACCAGGCGCTGAAGCATCGGTTCGCCGACCTGAAGATGTGGCTGGAGACCAGTCACGCGGTGGCCG
ACGCCGCCGCGGTCGCCGTCCAGAACGACGACGACAGGGCGGCGGAGCTGGTCAGCGTGGCGAAGTCGTACGTCGGACAG
TACGGCCCGGAGCTGTGCCAGGACTGCGTCCAGCTACACGGTGGCATCGGCGTGACCTTCGAACACGACCTGCATCTGTA
TCTCCGTCGGGTGGTCCTCGCGAGTGCGCTTCTGGGCACCGTGCGGGAACACCGCCTGCGGATCGCCACCCTTCTCGAAG
CCGGGAACAGCGTGGGAGAGGCCGGAGCGTGA

Upstream 100 bases:

>100_bases
TCGACATTCCGTCACTCTAACGGGAGGCTGTGGTGCTGGCAACGGCATGCCACGCTCGGCGCGATCGTCCGCTGCCGGGG
CCGGCCGACCGGAGGCATGA

Downstream 100 bases:

>100_bases
GTATCGACGAGACCGAGTCGGTCGAGGACTTCCGGAACCGTGTGCGGAGCTGGCTGGCGGAGAACATGCCGCGCACCGTG
CCGGGCGCCCCTGGCCGGCT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKVGLSVDQELLVGTTRKFLQDSVPSEALRGLRHHPAGYEPEYWRTGAELGWTSLLVAEQHGGGSVSGEGLRDLALVAYE
FGRQAAPGPLLATNVVAAALSRAGGELCREVLGRISAGDAVGAWCLSEPVPHDGLGEVTATAVASGADWVLSGEKRPVEH
GAQAEFFLVTARTGDGLTQLLVPAESSGVTVTPLRTVDLSRRFARVGFRDVRVPATAVVGEPGSAAAEVERQLHTALVIQ
TAETVGAMDQAFELTLAWAADRYSFGRPLASYQALKHRFADLKMWLETSHAVADAAAVAVQNDDDRAAELVSVAKSYVGQ
YGPELCQDCVQLHGGIGVTFEHDLHLYLRRVVLASALLGTVREHRLRIATLLEAGNSVGEAGA

Sequences:

>Translated_383_residues
MKVGLSVDQELLVGTTRKFLQDSVPSEALRGLRHHPAGYEPEYWRTGAELGWTSLLVAEQHGGGSVSGEGLRDLALVAYE
FGRQAAPGPLLATNVVAAALSRAGGELCREVLGRISAGDAVGAWCLSEPVPHDGLGEVTATAVASGADWVLSGEKRPVEH
GAQAEFFLVTARTGDGLTQLLVPAESSGVTVTPLRTVDLSRRFARVGFRDVRVPATAVVGEPGSAAAEVERQLHTALVIQ
TAETVGAMDQAFELTLAWAADRYSFGRPLASYQALKHRFADLKMWLETSHAVADAAAVAVQNDDDRAAELVSVAKSYVGQ
YGPELCQDCVQLHGGIGVTFEHDLHLYLRRVVLASALLGTVREHRLRIATLLEAGNSVGEAGA
>Mature_383_residues
MKVGLSVDQELLVGTTRKFLQDSVPSEALRGLRHHPAGYEPEYWRTGAELGWTSLLVAEQHGGGSVSGEGLRDLALVAYE
FGRQAAPGPLLATNVVAAALSRAGGELCREVLGRISAGDAVGAWCLSEPVPHDGLGEVTATAVASGADWVLSGEKRPVEH
GAQAEFFLVTARTGDGLTQLLVPAESSGVTVTPLRTVDLSRRFARVGFRDVRVPATAVVGEPGSAAAEVERQLHTALVIQ
TAETVGAMDQAFELTLAWAADRYSFGRPLASYQALKHRFADLKMWLETSHAVADAAAVAVQNDDDRAAELVSVAKSYVGQ
YGPELCQDCVQLHGGIGVTFEHDLHLYLRRVVLASALLGTVREHRLRIATLLEAGNSVGEAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=357, Percent_Identity=24.6498599439776, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4557233, Length=263, Percent_Identity=26.615969581749, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI187960098, Length=380, Percent_Identity=22.6315789473684, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI4557231, Length=380, Percent_Identity=22.6315789473684, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI226958412, Length=385, Percent_Identity=23.8961038961039, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI7656849, Length=343, Percent_Identity=23.9067055393586, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4501859, Length=252, Percent_Identity=25, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI226958414, Length=347, Percent_Identity=23.0547550432277, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI4557235, Length=278, Percent_Identity=24.4604316546763, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI76496475, Length=278, Percent_Identity=24.4604316546763, Blast_Score=72, Evalue=7e-13,
Organism=Escherichia coli, GI87081958, Length=361, Percent_Identity=23.8227146814404, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1786223, Length=359, Percent_Identity=23.6768802228412, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17534899, Length=388, Percent_Identity=24.2268041237113, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17569725, Length=387, Percent_Identity=24.2894056847545, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17533517, Length=337, Percent_Identity=23.7388724035608, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=380, Percent_Identity=24.7368421052632, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=275, Percent_Identity=26.5454545454545, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=389, Percent_Identity=22.107969151671, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17538396, Length=348, Percent_Identity=23.8505747126437, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17551932, Length=257, Percent_Identity=25.2918287937743, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17506239, Length=384, Percent_Identity=23.6979166666667, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=279, Percent_Identity=25.8064516129032, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24660351, Length=276, Percent_Identity=26.0869565217391, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=23.6074270557029, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24646207, Length=386, Percent_Identity=24.8704663212435, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281363737, Length=281, Percent_Identity=25.2669039145907, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21355753, Length=350, Percent_Identity=23.4285714285714, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24666513, Length=264, Percent_Identity=23.1060606060606, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40587; Mature: 40587

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGLSVDQELLVGTTRKFLQDSVPSEALRGLRHHPAGYEPEYWRTGAELGWTSLLVAEQ
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEC
HGGGSVSGEGLRDLALVAYEFGRQAAPGPLLATNVVAAALSRAGGELCREVLGRISAGDA
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VGAWCLSEPVPHDGLGEVTATAVASGADWVLSGEKRPVEHGAQAEFFLVTARTGDGLTQL
HHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCEEE
LVPAESSGVTVTPLRTVDLSRRFARVGFRDVRVPATAVVGEPGSAAAEVERQLHTALVIQ
EEECCCCCEEEEEEHHHHHHHHHHHCCCHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
TAETVGAMDQAFELTLAWAADRYSFGRPLASYQALKHRFADLKMWLETSHAVADAAAVAV
HHHHHHHHHHHHHEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
QNDDDRAAELVSVAKSYVGQYGPELCQDCVQLHGGIGVTFEHDLHLYLRRVVLASALLGT
ECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH
VREHRLRIATLLEAGNSVGEAGA
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKVGLSVDQELLVGTTRKFLQDSVPSEALRGLRHHPAGYEPEYWRTGAELGWTSLLVAEQ
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEC
HGGGSVSGEGLRDLALVAYEFGRQAAPGPLLATNVVAAALSRAGGELCREVLGRISAGDA
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VGAWCLSEPVPHDGLGEVTATAVASGADWVLSGEKRPVEHGAQAEFFLVTARTGDGLTQL
HHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCEEE
LVPAESSGVTVTPLRTVDLSRRFARVGFRDVRVPATAVVGEPGSAAAEVERQLHTALVIQ
EEECCCCCEEEEEEHHHHHHHHHHHCCCHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
TAETVGAMDQAFELTLAWAADRYSFGRPLASYQALKHRFADLKMWLETSHAVADAAAVAV
HHHHHHHHHHHHHEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
QNDDDRAAELVSVAKSYVGQYGPELCQDCVQLHGGIGVTFEHDLHLYLRRVVLASALLGT
ECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH
VREHRLRIATLLEAGNSVGEAGA
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]