Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is idnO [C]

Identifier: 158314540

GI number: 158314540

Start: 3214588

End: 3215385

Strand: Direct

Name: idnO [C]

Synonym: Franean1_2716

Alternate gene names: 158314540

Gene position: 3214588-3215385 (Clockwise)

Preceding gene: 158314539

Following gene: 158314542

Centisome position: 35.79

GC content: 69.42

Gene sequence:

>798_bases
GTGGGAAATCCGTTCAGCTACCAGGACAAGCGGGTCGTCGTCACTGGCGGTGCCTCCGGCATCGGCGCCGCTCTGCTCGA
CCTTCTCGGCGAGCTCGGCACGCCGCACCTCACAGTGATCGACCGGCAGCCGCCCACCGCTCGGGTGGACCACTTCGTGG
AGGCCGACCTGTCCTCCCGGGCAGGCGTCGACGCCGCCGCGGCGGCGGTCAGAGGTCCGGTGGACGTCCTGTTCAACAAC
GCCGGCGTCGCCGGCACGCAGCCCGCACGGGTGGTTTTCAGCGTCAACTATTTGGCGGTCCGGCGGCTGTCAGAGCAGCT
CGCGGGACGGATGCCGGCCGGTGGGGCCGTCGTCATCACCTCGTCGATGGCGGGGATCGGCTGGCAGGCGCACCAGGACG
AGCTGGGCAAGCTGATGACGATCGACGACTGGGACGAAGCGCTCACCTGGCTGGACGCACACCCCGAGCGCGCCAGCGAC
CCGTACGCATTGTCCAAGGAATGCACCCAGCTCTACACGCTCCATGCTGCCCGCGTGGCCAGCCGGGCGGGGACCAGGAT
CAACAGTGCCTGTCCTGGTGCCACGAGCACGCCGCTGCTGGGGGACTTCCGGTTGACGATGACCGACGAGATCATCGACT
GGTCGGTCCGCCAGGGCATCGGACGGCCGGCCACGCCTCGCGAGGTCGCGCAGATCCTCGCGTTTCTCGGCTCGGACGCC
GCCGGCTACCTCAACGGAGTGAACCTCCCGGTGGATGCGGGCCTGCAGGCGGCTCTCGCGACAGGCCAGACCGACTAG

Upstream 100 bases:

>100_bases
GCGAGCTGGGAGTCCTCGACCTGCTGTCGGCCTGACCGCCACCGCGCGCCAGACCGGGACCCGACGGCGCCGTCACCACC
CCTGTCACGATGGAGATCTC

Downstream 100 bases:

>100_bases
TGCCGAGGCCTGCAACCGGAACCCGGGCTACTTCCGGGAGCACCCGAGGGACGTGTTCGGCGAGCACGTGTGGATCATGC
TCGAGCATGCGGATCTCGCT

Product: short-chain dehydrogenase/reductase SDR

Products: D-Gluconate; Nicotinamide adenine dinucleotide phosphate [C]

Alternate protein names: Short-Chain Dehydrogenase/Reductase SDR; NAD-Dependent Epimerase/Dehydratase; Oxidoreductase; Dehydrogenase/Reductase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase; Short-Chain Type Dehydrogenase/Reductase; Oxidoreductase Short-Chain Dehydrogenase/Reductase Family; Oxidoreductase Short Chain Dehydrogenase/Reductase Family

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MGNPFSYQDKRVVVTGGASGIGAALLDLLGELGTPHLTVIDRQPPTARVDHFVEADLSSRAGVDAAAAAVRGPVDVLFNN
AGVAGTQPARVVFSVNYLAVRRLSEQLAGRMPAGGAVVITSSMAGIGWQAHQDELGKLMTIDDWDEALTWLDAHPERASD
PYALSKECTQLYTLHAARVASRAGTRINSACPGATSTPLLGDFRLTMTDEIIDWSVRQGIGRPATPREVAQILAFLGSDA
AGYLNGVNLPVDAGLQAALATGQTD

Sequences:

>Translated_265_residues
MGNPFSYQDKRVVVTGGASGIGAALLDLLGELGTPHLTVIDRQPPTARVDHFVEADLSSRAGVDAAAAAVRGPVDVLFNN
AGVAGTQPARVVFSVNYLAVRRLSEQLAGRMPAGGAVVITSSMAGIGWQAHQDELGKLMTIDDWDEALTWLDAHPERASD
PYALSKECTQLYTLHAARVASRAGTRINSACPGATSTPLLGDFRLTMTDEIIDWSVRQGIGRPATPREVAQILAFLGSDA
AGYLNGVNLPVDAGLQAALATGQTD
>Mature_264_residues
GNPFSYQDKRVVVTGGASGIGAALLDLLGELGTPHLTVIDRQPPTARVDHFVEADLSSRAGVDAAAAAVRGPVDVLFNNA
GVAGTQPARVVFSVNYLAVRRLSEQLAGRMPAGGAVVITSSMAGIGWQAHQDELGKLMTIDDWDEALTWLDAHPERASDP
YALSKECTQLYTLHAARVASRAGTRINSACPGATSTPLLGDFRLTMTDEIIDWSVRQGIGRPATPREVAQILAFLGSDAA
GYLNGVNLPVDAGLQAALATGQTD

Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.1.1.69 [C]

Molecular weight: Translated: 27773; Mature: 27641

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNPFSYQDKRVVVTGGASGIGAALLDLLGELGTPHLTVIDRQPPTARVDHFVEADLSSR
CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCHHC
AGVDAAAAAVRGPVDVLFNNAGVAGTQPARVVFSVNYLAVRRLSEQLAGRMPAGGAVVIT
CCCHHHHHHHCCCHHEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEE
SSMAGIGWQAHQDELGKLMTIDDWDEALTWLDAHPERASDPYALSKECTQLYTLHAARVA
CCCCCCCCCCCHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SRAGTRINSACPGATSTPLLGDFRLTMTDEIIDWSVRQGIGRPATPREVAQILAFLGSDA
HHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
AGYLNGVNLPVDAGLQAALATGQTD
HHHHCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
GNPFSYQDKRVVVTGGASGIGAALLDLLGELGTPHLTVIDRQPPTARVDHFVEADLSSR
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCHHC
AGVDAAAAAVRGPVDVLFNNAGVAGTQPARVVFSVNYLAVRRLSEQLAGRMPAGGAVVIT
CCCHHHHHHHCCCHHEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEE
SSMAGIGWQAHQDELGKLMTIDDWDEALTWLDAHPERASDPYALSKECTQLYTLHAARVA
CCCCCCCCCCCHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SRAGTRINSACPGATSTPLLGDFRLTMTDEIIDWSVRQGIGRPATPREVAQILAFLGSDA
HHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
AGYLNGVNLPVDAGLQAALATGQTD
HHHHCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NAD+; NADH; NADP+; NADPH [C]

Metal ions: Mn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.006 {NADPH}} 0.9 {5-keto-D-gluconate}} 0.02 {NADP+}} 20 {D-gluconate}} [C]

Substrates: 5-Dehydro-D-gluconate; H+; Nicotinamide adenine dinucleotide phosphate - reduced [C]

Specific reaction: 5-Dehydro-D-gluconate + H+ + Nicotinamide adenine dinucleotide phosphate - reduced <==> D-Gluconate + Nicotinamide adenine dinucleotide phosphate [C]

General reaction: Redox reaction [C]

Inhibitor: Cd2+; Cs2+; Cu2+; Divalent metal ions; Hg2+; Ni2+; p-Chloromercuribenzoate; Sn2+; Sulfhydryl reagents [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA