| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cyp108 [H]
Identifier: 158314518
GI number: 158314518
Start: 3187453
End: 3188802
Strand: Direct
Name: cyp108 [H]
Synonym: Franean1_2694
Alternate gene names: 158314518
Gene position: 3187453-3188802 (Clockwise)
Preceding gene: 158314517
Following gene: 158314519
Centisome position: 35.49
GC content: 67.19
Gene sequence:
>1350_bases ATGGGTTTCCGGTCGAGGGCCTTGGTCATCGACAACATTCCGAACCGTCGCGCGTCAGCTCTTGGCAGCCTCCCCCTGGG GAGCCCTTGGCGCGGGACACACGAAGGAGGCCCAGGCATGGACATCGCGGAAGCGGCCACCGTCTTCACCGACCCGACGG CATACGCCGACAACCAGCGGTTCCATACCGCCACGGCGCTGCTGCGGCGCGCCGCTCCGGTACAGCGCGTCGAACACGAG GACTTCGAGTCGTTCTACGCCATCACCAAGCATGACGACGTCATGACGATCTCACGAGGTTCGGACATCTGGCGCAACGC CCCACGCCCCGCGCTGGGCCCGAAACCGAAGGACGGCCGCGCCGCAGAGGACGCCCCCGTCCGCACCCTGATACAGATGG ACGCACCGGACCATCCCGTCTACCGGCACATCAGCGCGGAGTGGTTCAAACCGCTCGGCGTGCGGCGCCTGGCCGGACGC ATCGCCGAGCTCGCCAAGCGCTATGTCGACACCATGGCCGATTTCGGCGGCGCGTGCGATTTCTTCGCCGACGTCGCCTG CCACTACCCGCTCTACGTCATCCTGTCGCTGCTCGGCCTCCCCGAGGACGACTTCCCCAGAATGCTGAAACTCACCCAGG AACTGTTCGGCGCCAACGACCCGGACATGGCCCGCGGCAGCGGCGACGAACAGGCGCTGATGGCGGCGCTGCTGGACTTC TTCACCTACTTCCAGGCACTGACCGCCGACCGGAGAGCCAACCCGACCGACGACCTGGCCTCCGTGATCGCGAACGCCAC CATCGACGGCGAGCCCATCGGCGAACTCGAAGCCATCGGCTACTACGTGCTGATCGCCACCGCAGGTCACGACACCACCA GCTCAGCGCTCGCCGGAGGAATGCACGCGCTGCTGCAGTACCCGGACCAGTGGCGCCGGCTGTCCGAGAACCCCGGCCTC GTGCCCACCGCGTTCGACGAGATGATCCGCTGGGTCACCCCGGTCAAGCAGTTCATGCGCACCGCCGCCCGGGACACCGA GATCCGCGGCGTTCCTATCGCGGCAGGCGAGTCGGTGCTGCTGTCCTACCCTTCGGCCAACCGCGACGAGGACGTCTTCG ACAACCCCGACACCTTCGACGTCGGCCGCACACCCAACCGGCACGTCGCTTTCGGGTTCGGCGCCCACTACTGCCTTGGC ACCCACCTGGCCCGCCTCGAAGGCCAAGCCCTCTACGCCGAGCTGGTACCCCGCCTGCGCTCCATCGACCTGGCCGGCAC CCCCGAGTACATGGAAACACTGTTCGTCGGCGGACCGAAGCGCCTACCAATCCGCTACACCATGACCTGA
Upstream 100 bases:
>100_bases TCACTCTCCCAGACGCCGTCGAGCCGTCAGCCGGCGAGACCAGACAGGGGGAACGACAAGGATGACCGGACCACACGACG TACAGGTGATCGAGACGCTG
Downstream 100 bases:
>100_bases AGAAAACTGAACGGCAGAGCTGGACACATCCGCCGAACTGTCCGCGTCCGGCGCGACCCACTCACGGCCCTCACCCCGGC CGTACGCAGCAATACCGCGT
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450terp; Cytochrome P450 108 [H]
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MGFRSRALVIDNIPNRRASALGSLPLGSPWRGTHEGGPGMDIAEAATVFTDPTAYADNQRFHTATALLRRAAPVQRVEHE DFESFYAITKHDDVMTISRGSDIWRNAPRPALGPKPKDGRAAEDAPVRTLIQMDAPDHPVYRHISAEWFKPLGVRRLAGR IAELAKRYVDTMADFGGACDFFADVACHYPLYVILSLLGLPEDDFPRMLKLTQELFGANDPDMARGSGDEQALMAALLDF FTYFQALTADRRANPTDDLASVIANATIDGEPIGELEAIGYYVLIATAGHDTTSSALAGGMHALLQYPDQWRRLSENPGL VPTAFDEMIRWVTPVKQFMRTAARDTEIRGVPIAAGESVLLSYPSANRDEDVFDNPDTFDVGRTPNRHVAFGFGAHYCLG THLARLEGQALYAELVPRLRSIDLAGTPEYMETLFVGGPKRLPIRYTMT
Sequences:
>Translated_449_residues MGFRSRALVIDNIPNRRASALGSLPLGSPWRGTHEGGPGMDIAEAATVFTDPTAYADNQRFHTATALLRRAAPVQRVEHE DFESFYAITKHDDVMTISRGSDIWRNAPRPALGPKPKDGRAAEDAPVRTLIQMDAPDHPVYRHISAEWFKPLGVRRLAGR IAELAKRYVDTMADFGGACDFFADVACHYPLYVILSLLGLPEDDFPRMLKLTQELFGANDPDMARGSGDEQALMAALLDF FTYFQALTADRRANPTDDLASVIANATIDGEPIGELEAIGYYVLIATAGHDTTSSALAGGMHALLQYPDQWRRLSENPGL VPTAFDEMIRWVTPVKQFMRTAARDTEIRGVPIAAGESVLLSYPSANRDEDVFDNPDTFDVGRTPNRHVAFGFGAHYCLG THLARLEGQALYAELVPRLRSIDLAGTPEYMETLFVGGPKRLPIRYTMT >Mature_448_residues GFRSRALVIDNIPNRRASALGSLPLGSPWRGTHEGGPGMDIAEAATVFTDPTAYADNQRFHTATALLRRAAPVQRVEHED FESFYAITKHDDVMTISRGSDIWRNAPRPALGPKPKDGRAAEDAPVRTLIQMDAPDHPVYRHISAEWFKPLGVRRLAGRI AELAKRYVDTMADFGGACDFFADVACHYPLYVILSLLGLPEDDFPRMLKLTQELFGANDPDMARGSGDEQALMAALLDFF TYFQALTADRRANPTDDLASVIANATIDGEPIGELEAIGYYVLIATAGHDTTSSALAGGMHALLQYPDQWRRLSENPGLV PTAFDEMIRWVTPVKQFMRTAARDTEIRGVPIAAGESVLLSYPSANRDEDVFDNPDTFDVGRTPNRHVAFGFGAHYCLGT HLARLEGQALYAELVPRLRSIDLAGTPEYMETLFVGGPKRLPIRYTMT
Specific function: Catalyzes the hydroxylation of alpha-terpineol [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 49483; Mature: 49351
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFRSRALVIDNIPNRRASALGSLPLGSPWRGTHEGGPGMDIAEAATVFTDPTAYADNQR CCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCH FHTATALLRRAAPVQRVEHEDFESFYAITKHDDVMTISRGSDIWRNAPRPALGPKPKDGR HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHCCCCCCCCCCCCCCC AAEDAPVRTLIQMDAPDHPVYRHISAEWFKPLGVRRLAGRIAELAKRYVDTMADFGGACD CCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FFADVACHYPLYVILSLLGLPEDDFPRMLKLTQELFGANDPDMARGSGDEQALMAALLDF HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH FTYFQALTADRRANPTDDLASVIANATIDGEPIGELEAIGYYVLIATAGHDTTSSALAGG HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCEEEEEEECCCCCHHHHHHHH MHALLQYPDQWRRLSENPGLVPTAFDEMIRWVTPVKQFMRTAARDTEIRGVPIAAGESVL HHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEE LSYPSANRDEDVFDNPDTFDVGRTPNRHVAFGFGAHYCLGTHLARLEGQALYAELVPRLR EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHH SIDLAGTPEYMETLFVGGPKRLPIRYTMT HCCCCCCHHHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure GFRSRALVIDNIPNRRASALGSLPLGSPWRGTHEGGPGMDIAEAATVFTDPTAYADNQR CCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCH FHTATALLRRAAPVQRVEHEDFESFYAITKHDDVMTISRGSDIWRNAPRPALGPKPKDGR HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHCCCCCCCCCCCCCCC AAEDAPVRTLIQMDAPDHPVYRHISAEWFKPLGVRRLAGRIAELAKRYVDTMADFGGACD CCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FFADVACHYPLYVILSLLGLPEDDFPRMLKLTQELFGANDPDMARGSGDEQALMAALLDF HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH FTYFQALTADRRANPTDDLASVIANATIDGEPIGELEAIGYYVLIATAGHDTTSSALAGG HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCEEEEEEECCCCCHHHHHHHH MHALLQYPDQWRRLSENPGLVPTAFDEMIRWVTPVKQFMRTAARDTEIRGVPIAAGESVL HHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEE LSYPSANRDEDVFDNPDTFDVGRTPNRHVAFGFGAHYCLGTHLARLEGQALYAELVPRLR EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHH SIDLAGTPEYMETLFVGGPKRLPIRYTMT HCCCCCCHHHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1629218; 8120894 [H]