| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314378
Identifier: 158314378
GI number: 158314378
Start: 3033413
End: 3034426
Strand: Direct
Name: 158314378
Synonym: Franean1_2550
Alternate gene names: NA
Gene position: 3033413-3034426 (Clockwise)
Preceding gene: 158314377
Following gene: 158314379
Centisome position: 33.77
GC content: 75.15
Gene sequence:
>1014_bases ATGGCCAAACCGCTGCCGCAGCGCGCCCTGCGCGTCCCGTTGCGTCCCGCCGCCCGCGTCGTCGCCGACGCCGAACACCT GGCGAACCTCACCCCCCACCTCAGCCCGCGCGACCGCTGGATCGCCCGGCTCCTCTACGAGCACCGGGTCCTGACCACCC ACCAGCTCGTCCAGGTCGGCTGGCCCACCCGGCGCACCGCCAACGAACGGCTCCTCCAGCTCTACCGCTGGCGCGTCGTC GACCGTTTCCAGCCCCTCAGCCCTCTCGGGGAGGGCATGCCGCCCGCGCACTACGTGTGTGACGTCGCCGGCGCCGCGAT CCTCGCCGCCGAAGACGGCATCGACTTGGCCGCGACCGGCTACCGGCACGACCGCGCGCTCGGCGTCGCCTACTGGCCCC AGCTCGCCCACCGCGTCGCCGTCAACGGCTTCTTCACCCACCTCATCGCCCACGCCCGCAAGCCCAACCCGCCCGGCACG CTCACCGCCTGGTGGTCCGAGGCCCGGACCCGCCGCGCGTTCGGCGACATCGTCCGCCCCGACGCCTACGGCCGCTGGAC CAGTCGCGGCGGTGACCTTGAATGGTTCCTCGAACTCGACTGGGCCACCGAGCCCTACGCACGCCTCGCCGCGAAGATCG ACAAGTATGGGCGGCTCGCGACCGCGACCGGCATCACCACGCCGGTCCTGTTCTGGTTCCCCACCACCAACCGGGAGAGC CGCGCCCGCCGCGCGTTGGCCGACGCCGTCGCCGGGCTCGACCAGCCGAACACCGTCCCGGTCGCGACCACCGCCGCCAC CCTCGCCCCGCCCGACGACCAGCTCGACCCGGCCCCCGCCCGCTGGCTGCCCCTCGCCTCCAGCCGCGCCGGCCGGCTCC CCCTCGACCAGCTGCACCGGGCCTGGCCCCGGCTGTCCGCACCCGCGCCGGTGTCCGACCGGCCCGATGCCATCCCGACC GGGTCGGGCCTGCGTCCGCCCGCGCCGATGCCGCCCGAGCGGTATTGGGGGTGA
Upstream 100 bases:
>100_bases CCGCCGCGCCGGCTCCCACCGGTCCGGGTCCGCGGCCCACCTCCGACCCGCGTCGCGTCGCCTGACCGTGCGCTTCGCTG CCACCTCGAAGGACTTCCCG
Downstream 100 bases:
>100_bases GCGGCCACGACCAAGTACCTCGCTGCCGCGGTCGCCGCGGTGGTTCTGCTCATCGTGATGATGGGTGCCGCCGCCGCGGG GGTGGCCGAGCGGGTCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MAKPLPQRALRVPLRPAARVVADAEHLANLTPHLSPRDRWIARLLYEHRVLTTHQLVQVGWPTRRTANERLLQLYRWRVV DRFQPLSPLGEGMPPAHYVCDVAGAAILAAEDGIDLAATGYRHDRALGVAYWPQLAHRVAVNGFFTHLIAHARKPNPPGT LTAWWSEARTRRAFGDIVRPDAYGRWTSRGGDLEWFLELDWATEPYARLAAKIDKYGRLATATGITTPVLFWFPTTNRES RARRALADAVAGLDQPNTVPVATTAATLAPPDDQLDPAPARWLPLASSRAGRLPLDQLHRAWPRLSAPAPVSDRPDAIPT GSGLRPPAPMPPERYWG
Sequences:
>Translated_337_residues MAKPLPQRALRVPLRPAARVVADAEHLANLTPHLSPRDRWIARLLYEHRVLTTHQLVQVGWPTRRTANERLLQLYRWRVV DRFQPLSPLGEGMPPAHYVCDVAGAAILAAEDGIDLAATGYRHDRALGVAYWPQLAHRVAVNGFFTHLIAHARKPNPPGT LTAWWSEARTRRAFGDIVRPDAYGRWTSRGGDLEWFLELDWATEPYARLAAKIDKYGRLATATGITTPVLFWFPTTNRES RARRALADAVAGLDQPNTVPVATTAATLAPPDDQLDPAPARWLPLASSRAGRLPLDQLHRAWPRLSAPAPVSDRPDAIPT GSGLRPPAPMPPERYWG >Mature_336_residues AKPLPQRALRVPLRPAARVVADAEHLANLTPHLSPRDRWIARLLYEHRVLTTHQLVQVGWPTRRTANERLLQLYRWRVVD RFQPLSPLGEGMPPAHYVCDVAGAAILAAEDGIDLAATGYRHDRALGVAYWPQLAHRVAVNGFFTHLIAHARKPNPPGTL TAWWSEARTRRAFGDIVRPDAYGRWTSRGGDLEWFLELDWATEPYARLAAKIDKYGRLATATGITTPVLFWFPTTNRESR ARRALADAVAGLDQPNTVPVATTAATLAPPDDQLDPAPARWLPLASSRAGRLPLDQLHRAWPRLSAPAPVSDRPDAIPTG SGLRPPAPMPPERYWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37458; Mature: 37327
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPLPQRALRVPLRPAARVVADAEHLANLTPHLSPRDRWIARLLYEHRVLTTHQLVQVG CCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC WPTRRTANERLLQLYRWRVVDRFQPLSPLGEGMPPAHYVCDVAGAAILAAEDGIDLAATG CCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCEEEEECCCCCEEECC YRHDRALGVAYWPQLAHRVAVNGFFTHLIAHARKPNPPGTLTAWWSEARTRRAFGDIVRP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCC DAYGRWTSRGGDLEWFLELDWATEPYARLAAKIDKYGRLATATGITTPVLFWFPTTNRES CCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCHHH RARRALADAVAGLDQPNTVPVATTAATLAPPDDQLDPAPARWLPLASSRAGRLPLDQLHR HHHHHHHHHHHCCCCCCCCEEEECCEECCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHH AWPRLSAPAPVSDRPDAIPTGSGLRPPAPMPPERYWG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKPLPQRALRVPLRPAARVVADAEHLANLTPHLSPRDRWIARLLYEHRVLTTHQLVQVG CCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC WPTRRTANERLLQLYRWRVVDRFQPLSPLGEGMPPAHYVCDVAGAAILAAEDGIDLAATG CCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCEEEEECCCCCEEECC YRHDRALGVAYWPQLAHRVAVNGFFTHLIAHARKPNPPGTLTAWWSEARTRRAFGDIVRP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCC DAYGRWTSRGGDLEWFLELDWATEPYARLAAKIDKYGRLATATGITTPVLFWFPTTNRES CCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCHHH RARRALADAVAGLDQPNTVPVATTAATLAPPDDQLDPAPARWLPLASSRAGRLPLDQLHR HHHHHHHHHHHCCCCCCCCEEEECCEECCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHH AWPRLSAPAPVSDRPDAIPTGSGLRPPAPMPPERYWG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA