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The map label for this gene is yafL [H]

Identifier: 158314379

GI number: 158314379

Start: 3034466

End: 3035461

Strand: Direct

Name: yafL [H]

Synonym: Franean1_2551

Alternate gene names: 158314379

Gene position: 3034466-3035461 (Clockwise)

Preceding gene: 158314378

Following gene: 158314380

Centisome position: 33.78

GC content: 66.37

Gene sequence:

>996_bases
GTGGTTCTGCTCATCGTGATGATGGGTGCCGCCGCCGCGGGGGTGGCCGAGCGGGTCCTGTGCCTGCCGGTCGTCGGCTG
GTTCCTCGGCTGCGACAGCGGCGGCAGCCCCAGCCAGACCGCCCTCGATGACGTTCCCGCCGACTACCTGAACCTCTACA
TGCGGGCCGCCGCGACATGCCCCGGCCTGTCCTGGACGACGCTCGCGGCCATCGGCAAAATCGAGTCCGATCACGGTCGT
AGCCGGCTGCCGGGTGTGATCAGCGGCACCAACAGCGCCGGGGCCGCAGGTCCCATGCAGTTCCTCGCCGGAACGTTCGC
CGACGTCGTTGCTCACCACCAGCTCCCGGCGGGTGGCGCGAGCCCGCCGTCGCTCTACAACCCCCAGGACGCTGTGTACG
CCGCTGCGTTCTACCTGTGCGACAACCACGTCGTCACCGACCTGACCGGCGCCCTGTGGGCCTACAACCACTCGGATGCC
TACATCGCCCAGGTCGTCACCCAGGCCACCCAGTACTCTGAACCGAACCCGAACGCTTCAGTAGCGTGCGCTACATTTCA
GTCATCGTTTCAGTCCGGGATCGATCATTTCAGTAGCGTCGCGCTGACTGCCGTTCAGTTCGCTTGCGGGCAGATCGGTA
AGCCCTACGTCTGGGGTGGTAATGGCGAGCCCGGGTTCGACTGCAGTGGTCTGACGGCTGCCGCCTATGCCGTCGCGGGT
GCCCAGATCCCTCGTACGGCCCAGGGCCAGTACAACGCCGGCCCGCTTGTTTCAGCTGATAGGCCCCTGCTGCCGGGGGA
CCTGGTGTTCTTCGGTGGCGGACCAGCCAAGGTCACCCATGTCGGCATCTTCCTTGGTATCCAGAATGGCCAGGCGATGA
TGGTGGACGCCCCTCACGAGGGGGCTTACGTCCGCGTCGAACCGTTTCCCGCGACGGTGGGTGCCCGATGGGGATCAGAG
CTCTACCTCGGAGCGAGTACGCCAGCCGCTGGCTGA

Upstream 100 bases:

>100_bases
CCCGACCGGGTCGGGCCTGCGTCCGCCCGCGCCGATGCCGCCCGAGCGGTATTGGGGGTGAGCGGCCACGACCAAGTACC
TCGCTGCCGCGGTCGCCGCG

Downstream 100 bases:

>100_bases
CACGGGCGCAGACGGCGGACGACGGGAGCCTGGAGCGCCGTTTGCCGGCCTCGGCCGCTCGCGCTCCGTGCACGCCGTTC
AGCGATGTGGGCCGAGTCGG

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MVLLIVMMGAAAAGVAERVLCLPVVGWFLGCDSGGSPSQTALDDVPADYLNLYMRAAATCPGLSWTTLAAIGKIESDHGR
SRLPGVISGTNSAGAAGPMQFLAGTFADVVAHHQLPAGGASPPSLYNPQDAVYAAAFYLCDNHVVTDLTGALWAYNHSDA
YIAQVVTQATQYSEPNPNASVACATFQSSFQSGIDHFSSVALTAVQFACGQIGKPYVWGGNGEPGFDCSGLTAAAYAVAG
AQIPRTAQGQYNAGPLVSADRPLLPGDLVFFGGGPAKVTHVGIFLGIQNGQAMMVDAPHEGAYVRVEPFPATVGARWGSE
LYLGASTPAAG

Sequences:

>Translated_331_residues
MVLLIVMMGAAAAGVAERVLCLPVVGWFLGCDSGGSPSQTALDDVPADYLNLYMRAAATCPGLSWTTLAAIGKIESDHGR
SRLPGVISGTNSAGAAGPMQFLAGTFADVVAHHQLPAGGASPPSLYNPQDAVYAAAFYLCDNHVVTDLTGALWAYNHSDA
YIAQVVTQATQYSEPNPNASVACATFQSSFQSGIDHFSSVALTAVQFACGQIGKPYVWGGNGEPGFDCSGLTAAAYAVAG
AQIPRTAQGQYNAGPLVSADRPLLPGDLVFFGGGPAKVTHVGIFLGIQNGQAMMVDAPHEGAYVRVEPFPATVGARWGSE
LYLGASTPAAG
>Mature_331_residues
MVLLIVMMGAAAAGVAERVLCLPVVGWFLGCDSGGSPSQTALDDVPADYLNLYMRAAATCPGLSWTTLAAIGKIESDHGR
SRLPGVISGTNSAGAAGPMQFLAGTFADVVAHHQLPAGGASPPSLYNPQDAVYAAAFYLCDNHVVTDLTGALWAYNHSDA
YIAQVVTQATQYSEPNPNASVACATFQSSFQSGIDHFSSVALTAVQFACGQIGKPYVWGGNGEPGFDCSGLTAAAYAVAG
AQIPRTAQGQYNAGPLVSADRPLLPGDLVFFGGGPAKVTHVGIFLGIQNGQAMMVDAPHEGAYVRVEPFPATVGARWGSE
LYLGASTPAAG

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1786421, Length=123, Percent_Identity=37.3983739837398, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787944, Length=131, Percent_Identity=35.1145038167939, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 33943; Mature: 33943

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLIVMMGAAAAGVAERVLCLPVVGWFLGCDSGGSPSQTALDDVPADYLNLYMRAAATC
CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCC
PGLSWTTLAAIGKIESDHGRSRLPGVISGTNSAGAAGPMQFLAGTFADVVAHHQLPAGGA
CCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SPPSLYNPQDAVYAAAFYLCDNHVVTDLTGALWAYNHSDAYIAQVVTQATQYSEPNPNAS
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCC
VACATFQSSFQSGIDHFSSVALTAVQFACGQIGKPYVWGGNGEPGFDCSGLTAAAYAVAG
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHC
AQIPRTAQGQYNAGPLVSADRPLLPGDLVFFGGGPAKVTHVGIFLGIQNGQAMMVDAPHE
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCEEEEECCCC
GAYVRVEPFPATVGARWGSELYLGASTPAAG
CCEEEEECCCCHHCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MVLLIVMMGAAAAGVAERVLCLPVVGWFLGCDSGGSPSQTALDDVPADYLNLYMRAAATC
CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCC
PGLSWTTLAAIGKIESDHGRSRLPGVISGTNSAGAAGPMQFLAGTFADVVAHHQLPAGGA
CCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SPPSLYNPQDAVYAAAFYLCDNHVVTDLTGALWAYNHSDAYIAQVVTQATQYSEPNPNAS
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCC
VACATFQSSFQSGIDHFSSVALTAVQFACGQIGKPYVWGGNGEPGFDCSGLTAAAYAVAG
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHC
AQIPRTAQGQYNAGPLVSADRPLLPGDLVFFGGGPAKVTHVGIFLGIQNGQAMMVDAPHE
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCEEEEECCCC
GAYVRVEPFPATVGARWGSELYLGASTPAAG
CCEEEEECCCCHHCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]