Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314335

Identifier: 158314335

GI number: 158314335

Start: 2982403

End: 2983239

Strand: Direct

Name: 158314335

Synonym: Franean1_2505

Alternate gene names: NA

Gene position: 2982403-2983239 (Clockwise)

Preceding gene: 158314334

Following gene: 158314336

Centisome position: 33.2

GC content: 73.72

Gene sequence:

>837_bases
GTGCAGCTGCGGCTGCCCGGAGCTCTACATCGACCACCACGCCGCGGCCGACCGCCGGGTCGTCCTCACCGACGACTTCG
GCCAGCGGATCCAGATGAGCATCGAACAGCTGGAAGTCATCGTCGACGAGGCCCGGGCGGGTCGCATCAGCTCGCTGGTG
GCCGCCGAGCTCGCCGCTGGGGGGTGACCCACCGCCACCCGGTGGCCGCGGACCTGGTTCCGCTGGCCGGTCCGCTGGCC
GTAGCCGCCGGCGTGGCCTCAATCATCGTCGCAATGATCCACTTGTGGCGGATGCGCGCCCTGTTCCGCCGCCCGGTGGC
GGCGGACGGGCCGCGTACGCACGCGTCCGCCGCGGACGGCTGGATCGAGGGCGGGCATGTGCTGGTCGCGGCCGGGATGG
CGGTCATGTTCACCGGCCCCGCCCGGCTCGTCGGCTCCTGGCCGTTCCTCGCGCTGTACCTGGCGTTGACGGCGGCGCTG
CTCGTCGGGCTCGTCGCCCATCCCCGGTGCAGTGCGCCGGGCATGTGGTCCTGCTGTGCGCTGCTCGTCGTGGAGGCGGC
GGCGATGGCGTGCATGTCCGGGGCGGCCTGCGTCGCCGGCTGGCCGCTGCGCACTGACGGGGCGATCGGCGCCTGGTGTG
TCGTCATCTTCGGCGGGGCGTGCCTGGCGGCGCTGGCCGGCCCGGCGGCGCGCCGGTTCGCCGCGCCGCCGGCGCGCCCG
CCCGTCCGTGAGCTGGCCGCCCGGCTGATCCAAATCTTTCCGGAACCGGTCGTCCCGCGCGGATCCCGACTGATCATGTC
GGGTGGAATGATCCTGATGCTCCTCGCCCGTACCTGA

Upstream 100 bases:

>100_bases
GCGGGCCCGACCGCTTACACTCAGATGATCTTATCGTCGTCGTGCGAGGTGCCATGAGCGGGTCGGACGCCCTGAATCGC
GTCATCACGTTCTGTGGGAA

Downstream 100 bases:

>100_bases
TCGCCCGCTCCCGTACCCCCCGGGTGACCTGCTCCGAAACCGCGCATTCCACTCCCTGAGCGGGCGGCGAGCCCGAAGTG
CGCCTACGGTCGGCCGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MQLRLPGALHRPPRRGRPPGRPHRRLRPADPDEHRTAGSHRRRGPGGSHQLAGGRRARRWGVTHRHPVAADLVPLAGPLA
VAAGVASIIVAMIHLWRMRALFRRPVAADGPRTHASAADGWIEGGHVLVAAGMAVMFTGPARLVGSWPFLALYLALTAAL
LVGLVAHPRCSAPGMWSCCALLVVEAAAMACMSGAACVAGWPLRTDGAIGAWCVVIFGGACLAALAGPAARRFAAPPARP
PVRELAARLIQIFPEPVVPRGSRLIMSGGMILMLLART

Sequences:

>Translated_278_residues
MQLRLPGALHRPPRRGRPPGRPHRRLRPADPDEHRTAGSHRRRGPGGSHQLAGGRRARRWGVTHRHPVAADLVPLAGPLA
VAAGVASIIVAMIHLWRMRALFRRPVAADGPRTHASAADGWIEGGHVLVAAGMAVMFTGPARLVGSWPFLALYLALTAAL
LVGLVAHPRCSAPGMWSCCALLVVEAAAMACMSGAACVAGWPLRTDGAIGAWCVVIFGGACLAALAGPAARRFAAPPARP
PVRELAARLIQIFPEPVVPRGSRLIMSGGMILMLLART
>Mature_278_residues
MQLRLPGALHRPPRRGRPPGRPHRRLRPADPDEHRTAGSHRRRGPGGSHQLAGGRRARRWGVTHRHPVAADLVPLAGPLA
VAAGVASIIVAMIHLWRMRALFRRPVAADGPRTHASAADGWIEGGHVLVAAGMAVMFTGPARLVGSWPFLALYLALTAAL
LVGLVAHPRCSAPGMWSCCALLVVEAAAMACMSGAACVAGWPLRTDGAIGAWCVVIFGGACLAALAGPAARRFAAPPARP
PVRELAARLIQIFPEPVVPRGSRLIMSGGMILMLLART

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29275; Mature: 29275

Theoretical pI: Translated: 12.35; Mature: 12.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRLPGALHRPPRRGRPPGRPHRRLRPADPDEHRTAGSHRRRGPGGSHQLAGGRRARRW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHC
GVTHRHPVAADLVPLAGPLAVAAGVASIIVAMIHLWRMRALFRRPVAADGPRTHASAADG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
WIEGGHVLVAAGMAVMFTGPARLVGSWPFLALYLALTAALLVGLVAHPRCSAPGMWSCCA
CCCCCEEEEECCCHHEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LLVVEAAAMACMSGAACVAGWPLRTDGAIGAWCVVIFGGACLAALAGPAARRFAAPPARP
HHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC
PVRELAARLIQIFPEPVVPRGSRLIMSGGMILMLLART
CHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECC
>Mature Secondary Structure
MQLRLPGALHRPPRRGRPPGRPHRRLRPADPDEHRTAGSHRRRGPGGSHQLAGGRRARRW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHC
GVTHRHPVAADLVPLAGPLAVAAGVASIIVAMIHLWRMRALFRRPVAADGPRTHASAADG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
WIEGGHVLVAAGMAVMFTGPARLVGSWPFLALYLALTAALLVGLVAHPRCSAPGMWSCCA
CCCCCEEEEECCCHHEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LLVVEAAAMACMSGAACVAGWPLRTDGAIGAWCVVIFGGACLAALAGPAARRFAAPPARP
HHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC
PVRELAARLIQIFPEPVVPRGSRLIMSGGMILMLLART
CHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA