| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314336
Identifier: 158314336
GI number: 158314336
Start: 2983370
End: 2983972
Strand: Direct
Name: 158314336
Synonym: Franean1_2506
Alternate gene names: NA
Gene position: 2983370-2983972 (Clockwise)
Preceding gene: 158314335
Following gene: 158314340
Centisome position: 33.21
GC content: 74.13
Gene sequence:
>603_bases ATGCGTCGAGTCGTGTTCATCTCCGTACTGGCCGCCGCGGTCATCTTGAGCGGGGCGGCGTCTGCGGTGTCCGCCGCGCC GACCGCGGTGCAGTCACCCCCGGCCGCCACACCGGGCGCCGCGCGCAGCCCGGGTGCTGGGGCCGGCTCGGGTGCTGGGG CCAGCCCGGATGCCGTGGCCAGCCCGTCAGGCCCGGGCAGCTCGGCCGTCGTGGCCGGTTCGTTGAGCCTGGCGGAGGCG TCGGGCCTTGTCCGCGGCCGTGGTTACACACCGATCACCACGGACGGCTACGAGCCCACCCACGATCTCAGCGTGATCGT CGGGCGGCTGTCCACCTCGGTGGACGGCCATCCGCAGCAGGCCTTCTTCTTCCACCGCGGCCGGTTCGTCGGGACGGACG CCGTCGCGAGCGCGGGCGTGCGGTGGGTGTGGTCGACCAGCGAGGTGGTGGCGCTGCAGTACGACCTGTACCGCCCGGCA GACCCGATGTGCTGCCCGAGCGCGGGCGCGGCGAGCGTGCGGTTCCGCTGGGACGGCACGTCGGTCGTGCCGCTCGACCC GATCCCGACCAGCAAGTGGACCGCCGCCGAGAGCCGCCGCTGA
Upstream 100 bases:
>100_bases GCTCCGAAACCGCGCATTCCACTCCCTGAGCGGGCGGCGAGCCCGAAGTGCGCCTACGGTCGGCCGGTCGGCAGATACGA GGCCCAAGGGGGCGGTCGCC
Downstream 100 bases:
>100_bases CCAGCGACGCAGTGCCGGTGGGACCGCCGGCCGGTGGGACCGCCGCCGCGGCCGGGCCCGGGTCAGCCCCGGGGCCCGGC CGCGGCGGTCACGCCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRRVVFISVLAAAVILSGAASAVSAAPTAVQSPPAATPGAARSPGAGAGSGAGASPDAVASPSGPGSSAVVAGSLSLAEA SGLVRGRGYTPITTDGYEPTHDLSVIVGRLSTSVDGHPQQAFFFHRGRFVGTDAVASAGVRWVWSTSEVVALQYDLYRPA DPMCCPSAGAASVRFRWDGTSVVPLDPIPTSKWTAAESRR
Sequences:
>Translated_200_residues MRRVVFISVLAAAVILSGAASAVSAAPTAVQSPPAATPGAARSPGAGAGSGAGASPDAVASPSGPGSSAVVAGSLSLAEA SGLVRGRGYTPITTDGYEPTHDLSVIVGRLSTSVDGHPQQAFFFHRGRFVGTDAVASAGVRWVWSTSEVVALQYDLYRPA DPMCCPSAGAASVRFRWDGTSVVPLDPIPTSKWTAAESRR >Mature_200_residues MRRVVFISVLAAAVILSGAASAVSAAPTAVQSPPAATPGAARSPGAGAGSGAGASPDAVASPSGPGSSAVVAGSLSLAEA SGLVRGRGYTPITTDGYEPTHDLSVIVGRLSTSVDGHPQQAFFFHRGRFVGTDAVASAGVRWVWSTSEVVALQYDLYRPA DPMCCPSAGAASVRFRWDGTSVVPLDPIPTSKWTAAESRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20180; Mature: 20180
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVVFISVLAAAVILSGAASAVSAAPTAVQSPPAATPGAARSPGAGAGSGAGASPDAVA CCEEEHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPSGPGSSAVVAGSLSLAEASGLVRGRGYTPITTDGYEPTHDLSVIVGRLSTSVDGHPQQ CCCCCCCCEEEEECCCHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE AFFFHRGRFVGTDAVASAGVRWVWSTSEVVALQYDLYRPADPMCCPSAGAASVRFRWDGT EEEEECCEEECCHHHHHCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCC SVVPLDPIPTSKWTAAESRR EEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRRVVFISVLAAAVILSGAASAVSAAPTAVQSPPAATPGAARSPGAGAGSGAGASPDAVA CCEEEHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPSGPGSSAVVAGSLSLAEASGLVRGRGYTPITTDGYEPTHDLSVIVGRLSTSVDGHPQQ CCCCCCCCEEEEECCCHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE AFFFHRGRFVGTDAVASAGVRWVWSTSEVVALQYDLYRPADPMCCPSAGAASVRFRWDGT EEEEECCEEECCHHHHHCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCC SVVPLDPIPTSKWTAAESRR EEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA