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The map label for this gene is nreC [H]

Identifier: 158314334

GI number: 158314334

Start: 2981555

End: 2982211

Strand: Direct

Name: nreC [H]

Synonym: Franean1_2504

Alternate gene names: 158314334

Gene position: 2981555-2982211 (Clockwise)

Preceding gene: 158314331

Following gene: 158314335

Centisome position: 33.19

GC content: 72.6

Gene sequence:

>657_bases
GTGCGTGTTGCGATCGCCGAGGACAGCGGACTCATCCGGGAGGCGCTCAGCGTTCTGCTCGCGACCATCGGGGTGGAGGT
CACCGCCTCCGTGCCGACCGGGACGGAGCTGCTCGCCGTCGTGCGGGACGCCCCGCCCGACGTCGCGATCGTGGACATGC
GGATGCCCCCGACCAGGACCAACGAGGGGCTGCTGACGGCCCGCGCGCTGCGGCAGGCGCACCCGGGGATGGGCGTCCTG
GTGGTCACCGCGCACGACGACGACCCGTTCGCCGCGGACCTGTTCGCCGGTGGCGCCGCCGGCATCGGGTACATGCGCAA
GGACAACATCACCAACCGGCAGGCGTTGAAGGACGCCCTCGAGCGGCTCCGCGAGGGGCAGCCGGTCATCGACTCGCACA
TCGCCGCGCGGCTGCTCGCCGGCTACCCGCAGTCGCAGCGCCTGAGCGGGCTGTCGGAGCGCGAGCGCCGCATCCTCGAG
CTGATGGCCCAGGGCCTGTCGAACAGCGGGATCGCCCAGCGGGTGCACCTGAGCCCGAAGACGGTCGAATCCCACATCGC
GAGCATCTTCACCAAGCTGGGGCTGCGGCCGGAGCCAACCGAGAACCGCCGGGTGCTCGCCGTCCTGGCCTGGGCGGACG
CCGCCCGCCACGGCTGA

Upstream 100 bases:

>100_bases
CCCGAGCGAACGCGGGGTTTCCTACCGGATGTCCCCCGGAACGGGCCCGGGTTATCCCGGTGCGTGACCGGGCCGTCCGG
GGGACGTGAGAAAATCCGGT

Downstream 100 bases:

>100_bases
GCCCGCCGGCCACGACCGAGCCCTCAGCCCGCCGGCCACGCCTGCCGCCGGCCACCCGCCGGCGCCACGGTGGGCGGATT
CGGTCGGCTCTGCGGGCCCG

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Nitrogen regulation protein C [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRVAIAEDSGLIREALSVLLATIGVEVTASVPTGTELLAVVRDAPPDVAIVDMRMPPTRTNEGLLTARALRQAHPGMGVL
VVTAHDDDPFAADLFAGGAAGIGYMRKDNITNRQALKDALERLREGQPVIDSHIAARLLAGYPQSQRLSGLSERERRILE
LMAQGLSNSGIAQRVHLSPKTVESHIASIFTKLGLRPEPTENRRVLAVLAWADAARHG

Sequences:

>Translated_218_residues
MRVAIAEDSGLIREALSVLLATIGVEVTASVPTGTELLAVVRDAPPDVAIVDMRMPPTRTNEGLLTARALRQAHPGMGVL
VVTAHDDDPFAADLFAGGAAGIGYMRKDNITNRQALKDALERLREGQPVIDSHIAARLLAGYPQSQRLSGLSERERRILE
LMAQGLSNSGIAQRVHLSPKTVESHIASIFTKLGLRPEPTENRRVLAVLAWADAARHG
>Mature_218_residues
MRVAIAEDSGLIREALSVLLATIGVEVTASVPTGTELLAVVRDAPPDVAIVDMRMPPTRTNEGLLTARALRQAHPGMGVL
VVTAHDDDPFAADLFAGGAAGIGYMRKDNITNRQALKDALERLREGQPVIDSHIAARLLAGYPQSQRLSGLSERERRILE
LMAQGLSNSGIAQRVHLSPKTVESHIASIFTKLGLRPEPTENRRVLAVLAWADAARHG

Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. Phosphorylated nreC binds to a GC-rich palindromic sequence at the promoters of the nitrate (narGHJI) and nit

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788222, Length=200, Percent_Identity=27.5, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788521, Length=202, Percent_Identity=30.1980198019802, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1790102, Length=205, Percent_Identity=28.780487804878, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23413; Mature: 23413

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAIAEDSGLIREALSVLLATIGVEVTASVPTGTELLAVVRDAPPDVAIVDMRMPPTRT
CEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCC
NEGLLTARALRQAHPGMGVLVVTAHDDDPFAADLFAGGAAGIGYMRKDNITNRQALKDAL
CCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
ERLREGQPVIDSHIAARLLAGYPQSQRLSGLSERERRILELMAQGLSNSGIAQRVHLSPK
HHHHCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHH
TVESHIASIFTKLGLRPEPTENRRVLAVLAWADAARHG
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECHHCCCC
>Mature Secondary Structure
MRVAIAEDSGLIREALSVLLATIGVEVTASVPTGTELLAVVRDAPPDVAIVDMRMPPTRT
CEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCC
NEGLLTARALRQAHPGMGVLVVTAHDDDPFAADLFAGGAAGIGYMRKDNITNRQALKDAL
CCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
ERLREGQPVIDSHIAARLLAGYPQSQRLSGLSERERRILELMAQGLSNSGIAQRVHLSPK
HHHHCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHH
TVESHIASIFTKLGLRPEPTENRRVLAVLAWADAARHG
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA