| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is actII-3 [H]
Identifier: 158314084
GI number: 158314084
Start: 2689241
End: 2691349
Strand: Direct
Name: actII-3 [H]
Synonym: Franean1_2251
Alternate gene names: 158314084
Gene position: 2689241-2691349 (Clockwise)
Preceding gene: 158314083
Following gene: 158314085
Centisome position: 29.94
GC content: 69.32
Gene sequence:
>2109_bases ATGTTCGGCGGCCAGTACCAGGCCAAGCTCGCCGAGGTGCAGAAGAACGACAACGCCGCGTTCCTGCCCGGGTCGGCCGA GTCGACCCGGGTGGCGGACGAGTTGGAGAAGTTCCGGTCCGTCCAGACGCTGCCGGGATTCATCGTCTACCAGCGCGAGA GCGGCCTGACCGCCGCAGACAAGGCCAAGATCGCCGCGGACGCCGAGGTGTTCCGCGCCGTCCCGGGCGTCGACCCGGAC CAGTCCGCCGATCCCCAGTTCTCCGCGGACGGTACCGCCGCCAACGTCTCCGTCCCGCTCGTCGGCAAGAAGGGTGACGT CGAGGTCACCGGCGACGAGCTGGTCGACGTCGAGAACGCGGTCGTCGACATTGCGAAGAAGGACGTCCCCGACGGCCTGA CCGTGCACAGCGCGGGGCCCGGTGGTCTGCTGGTGGCGTTCATCGAGGCGTTCGAGGGCATCGACGGTGTGCTGCTGCTC GCCGCCGGCCTGGTCGTGATCGTGATCCTGCTTGTGGTCTACCGGAGCCCGGTGCTGTGGTTCTTCCCGCTCTTCAGCTC GGTGCTGGCCCTCGGGGTCTCGGTCCTGATCATCTACCCGCTGGCCAAGCATGACGTGCTCACGCTCAACGGGCAGAGCC AGGGCATCCTGTTCGTCCTGGTGATCGGTGCCGGCACCGACTACGCGCTGCTGCTGGTCAGCCGGTACCGAGAAGAGCTG CACACCCACGCCAGCCGAGTGGAGGCGATGATCACCGCGTGGCGCGGTGCCGCGCCGGCCATCGCGGCGTCGGCCGTCAC GGTCGTGCTCGGTCTGCTGTGCCTGTACCTGGGCGAGCTGAACTCGAACAAGAGCCTCGGCCCGGTCACCGCGATCGGCA TCGCCTGCACCGCGCTGGTGATGTTGACCTTCCTGCCTGTGTTCCTGGTGCTGTGCGGCCGGTGGGTGTTCTGGCCGCGC ATCCCCCACTTCGACCAGCAGGCCGACCTGGCCAGCCACGGCGTGTGGGCGCGCTTCGCCGGCGGGCTGGTGCGCCGGCC GCGGATGGCCTGGGTCTCCACCGCGATCGTCCTGCTGGCCTGTGCCGGCGCGATGACGACGCTCAAGGTCGACGGCCTGT CGACGACCGACAGCTTCACCAACGACCCCGACGCGATCCTCGGCCAGGAGATCTTCGACGCGCACTTCAGCCAGGGCTCC GGCGCGCCGGCGGTGATCACCGCCGGCGTTGACCGCAAGGACGAGGTCATCGCCGCTGCCGCGAGGGTCCCGGGGGTGTC CACCGGCCCCGGTGCGGTATGCGTCCAGATCGACTACGCCAAGGTGGCCCGCGCGATCGCCACGGGCAGCCCGCAGCTCC GACCCGGGGCGGACGGCTGTCTGCCCGCCAGCCTCCAGGTCTCCGAGGTCGACGGGCGGATCGCCGTCGAGGCAACGATC ACCCACCGTTACGACACGCCCGAGGCCTACGGCACGGTCAAGGCGCTACGGGCCGCGCTGCACCCGATCGCGGGCGCCAA CGCTCTGGTCGGCGGGCAGTCGGCGATCAACTACGACACCCAGCAGGCGTCCGCGCATGACCGGAACCTGATCATCCCGA TCGTGCTGGTCGTCATCCTGATCGTGCTCGGGGTGCTGCTGCGGGCGCTCGTCGCGCCGCTGCTGCTGATCGCCACCGTG GTGCTGTCGTTCACCGCCACGCTCGGCGTGAGCGCGCTGGTGTTCAACCACGTCTTCGGCTTCGCGGGCGCCGACCCGGG CTTCCCGCTGTTCGCCTTCGTGTTCCTGGTCGCCCTCGGCATCGACTACAACATCTTCCTGATGACCCGGGTGCGGGAGG AGACCCTCGAACACGGGACGCGGTCCGGCATCGTCCGCGGTCTGTCCGTCACCGGCGGTGTGATCACCTCGGCGGGGGTC GTGCTGGCGGCGACCTTCGCCGTCCTTGGGGTGCTGCCCCTGGTCTTCCTCGCCGAAGTGGGATTCTCGGTGGCCTTCGG CGTCCTGCTGGACACGATCGTCGTCCGCTCCATCCTGGTGCCGGCGCTCAGCTACGACATCGGGAAGAAGATCTGGTGGC CGTCGAAGCTGGCGAAGTCGGCCGACTGA
Upstream 100 bases:
>100_bases GGCCACCGTCGACGGAACCGGCGGTGGCGGTGGCCGCGCGCGGCGGCCGCGGATTCTCTACCTGTTCGCGGGCCTGGCGG TGCTCTGGCTGCTGCTGGGC
Downstream 100 bases:
>100_bases CCCTCACCGGCCGCCAGGGACGCTGGGTCGTCGCGGCGGCGGTGCTGGGCTCCGCACTGGCGTCGATCGACGCGACCGTC GTCGGCATCGCCCTGCCGGC
Product: MMPL domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
>702_residues MFGGQYQAKLAEVQKNDNAAFLPGSAESTRVADELEKFRSVQTLPGFIVYQRESGLTAADKAKIAADAEVFRAVPGVDPD QSADPQFSADGTAANVSVPLVGKKGDVEVTGDELVDVENAVVDIAKKDVPDGLTVHSAGPGGLLVAFIEAFEGIDGVLLL AAGLVVIVILLVVYRSPVLWFFPLFSSVLALGVSVLIIYPLAKHDVLTLNGQSQGILFVLVIGAGTDYALLLVSRYREEL HTHASRVEAMITAWRGAAPAIAASAVTVVLGLLCLYLGELNSNKSLGPVTAIGIACTALVMLTFLPVFLVLCGRWVFWPR IPHFDQQADLASHGVWARFAGGLVRRPRMAWVSTAIVLLACAGAMTTLKVDGLSTTDSFTNDPDAILGQEIFDAHFSQGS GAPAVITAGVDRKDEVIAAAARVPGVSTGPGAVCVQIDYAKVARAIATGSPQLRPGADGCLPASLQVSEVDGRIAVEATI THRYDTPEAYGTVKALRAALHPIAGANALVGGQSAINYDTQQASAHDRNLIIPIVLVVILIVLGVLLRALVAPLLLIATV VLSFTATLGVSALVFNHVFGFAGADPGFPLFAFVFLVALGIDYNIFLMTRVREETLEHGTRSGIVRGLSVTGGVITSAGV VLAATFAVLGVLPLVFLAEVGFSVAFGVLLDTIVVRSILVPALSYDIGKKIWWPSKLAKSAD
Sequences:
>Translated_702_residues MFGGQYQAKLAEVQKNDNAAFLPGSAESTRVADELEKFRSVQTLPGFIVYQRESGLTAADKAKIAADAEVFRAVPGVDPD QSADPQFSADGTAANVSVPLVGKKGDVEVTGDELVDVENAVVDIAKKDVPDGLTVHSAGPGGLLVAFIEAFEGIDGVLLL AAGLVVIVILLVVYRSPVLWFFPLFSSVLALGVSVLIIYPLAKHDVLTLNGQSQGILFVLVIGAGTDYALLLVSRYREEL HTHASRVEAMITAWRGAAPAIAASAVTVVLGLLCLYLGELNSNKSLGPVTAIGIACTALVMLTFLPVFLVLCGRWVFWPR IPHFDQQADLASHGVWARFAGGLVRRPRMAWVSTAIVLLACAGAMTTLKVDGLSTTDSFTNDPDAILGQEIFDAHFSQGS GAPAVITAGVDRKDEVIAAAARVPGVSTGPGAVCVQIDYAKVARAIATGSPQLRPGADGCLPASLQVSEVDGRIAVEATI THRYDTPEAYGTVKALRAALHPIAGANALVGGQSAINYDTQQASAHDRNLIIPIVLVVILIVLGVLLRALVAPLLLIATV VLSFTATLGVSALVFNHVFGFAGADPGFPLFAFVFLVALGIDYNIFLMTRVREETLEHGTRSGIVRGLSVTGGVITSAGV VLAATFAVLGVLPLVFLAEVGFSVAFGVLLDTIVVRSILVPALSYDIGKKIWWPSKLAKSAD >Mature_702_residues MFGGQYQAKLAEVQKNDNAAFLPGSAESTRVADELEKFRSVQTLPGFIVYQRESGLTAADKAKIAADAEVFRAVPGVDPD QSADPQFSADGTAANVSVPLVGKKGDVEVTGDELVDVENAVVDIAKKDVPDGLTVHSAGPGGLLVAFIEAFEGIDGVLLL AAGLVVIVILLVVYRSPVLWFFPLFSSVLALGVSVLIIYPLAKHDVLTLNGQSQGILFVLVIGAGTDYALLLVSRYREEL HTHASRVEAMITAWRGAAPAIAASAVTVVLGLLCLYLGELNSNKSLGPVTAIGIACTALVMLTFLPVFLVLCGRWVFWPR IPHFDQQADLASHGVWARFAGGLVRRPRMAWVSTAIVLLACAGAMTTLKVDGLSTTDSFTNDPDAILGQEIFDAHFSQGS GAPAVITAGVDRKDEVIAAAARVPGVSTGPGAVCVQIDYAKVARAIATGSPQLRPGADGCLPASLQVSEVDGRIAVEATI THRYDTPEAYGTVKALRAALHPIAGANALVGGQSAINYDTQQASAHDRNLIIPIVLVVILIVLGVLLRALVAPLLLIATV VLSFTATLGVSALVFNHVFGFAGADPGFPLFAFVFLVALGIDYNIFLMTRVREETLEHGTRSGIVRGLSVTGGVITSAGV VLAATFAVLGVLPLVFLAEVGFSVAFGVLLDTIVVRSILVPALSYDIGKKIWWPSKLAKSAD
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 73580; Mature: 73580
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGGQYQAKLAEVQKNDNAAFLPGSAESTRVADELEKFRSVQTLPGFIVYQRESGLTAAD CCCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH KAKIAADAEVFRAVPGVDPDQSADPQFSADGTAANVSVPLVGKKGDVEVTGDELVDVENA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCHHHHHHHHH VVDIAKKDVPDGLTVHSAGPGGLLVAFIEAFEGIDGVLLLAAGLVVIVILLVVYRSPVLW HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHH FFPLFSSVLALGVSVLIIYPLAKHDVLTLNGQSQGILFVLVIGAGTDYALLLVSRYREEL HHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHH HTHASRVEAMITAWRGAAPAIAASAVTVVLGLLCLYLGELNSNKSLGPVTAIGIACTALV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH MLTFLPVFLVLCGRWVFWPRIPHFDQQADLASHGVWARFAGGLVRRPRMAWVSTAIVLLA HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCHHCCCHHHHHHHHHHHHH CAGAMTTLKVDGLSTTDSFTNDPDAILGQEIFDAHFSQGSGAPAVITAGVDRKDEVIAAA HHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHH ARVPGVSTGPGAVCVQIDYAKVARAIATGSPQLRPGADGCLPASLQVSEVDGRIAVEATI HHCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEE THRYDTPEAYGTVKALRAALHPIAGANALVGGQSAINYDTQQASAHDRNLIIPIVLVVIL EECCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHCCCCCCCCHHHHHHHHHH IVLGVLLRALVAPLLLIATVVLSFTATLGVSALVFNHVFGFAGADPGFPLFAFVFLVALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC IDYNIFLMTRVREETLEHGTRSGIVRGLSVTGGVITSAGVVLAATFAVLGVLPLVFLAEV CCCEEEEEHHHHHHHHHCCCHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFSVAFGVLLDTIVVRSILVPALSYDIGKKIWWPSKLAKSAD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC >Mature Secondary Structure MFGGQYQAKLAEVQKNDNAAFLPGSAESTRVADELEKFRSVQTLPGFIVYQRESGLTAAD CCCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH KAKIAADAEVFRAVPGVDPDQSADPQFSADGTAANVSVPLVGKKGDVEVTGDELVDVENA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCHHHHHHHHH VVDIAKKDVPDGLTVHSAGPGGLLVAFIEAFEGIDGVLLLAAGLVVIVILLVVYRSPVLW HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHH FFPLFSSVLALGVSVLIIYPLAKHDVLTLNGQSQGILFVLVIGAGTDYALLLVSRYREEL HHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHH HTHASRVEAMITAWRGAAPAIAASAVTVVLGLLCLYLGELNSNKSLGPVTAIGIACTALV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH MLTFLPVFLVLCGRWVFWPRIPHFDQQADLASHGVWARFAGGLVRRPRMAWVSTAIVLLA HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCHHCCCHHHHHHHHHHHHH CAGAMTTLKVDGLSTTDSFTNDPDAILGQEIFDAHFSQGSGAPAVITAGVDRKDEVIAAA HHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHH ARVPGVSTGPGAVCVQIDYAKVARAIATGSPQLRPGADGCLPASLQVSEVDGRIAVEATI HHCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEE THRYDTPEAYGTVKALRAALHPIAGANALVGGQSAINYDTQQASAHDRNLIIPIVLVVIL EECCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHCCCCCCCCHHHHHHHHHH IVLGVLLRALVAPLLLIATVVLSFTATLGVSALVFNHVFGFAGADPGFPLFAFVFLVALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC IDYNIFLMTRVREETLEHGTRSGIVRGLSVTGGVITSAGVVLAATFAVLGVLPLVFLAEV CCCEEEEEHHHHHHHHHCCCHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFSVAFGVLLDTIVVRSILVPALSYDIGKKIWWPSKLAKSAD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1878971; 12000953 [H]