| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is bfr [H]
Identifier: 158314083
GI number: 158314083
Start: 2688211
End: 2688684
Strand: Direct
Name: bfr [H]
Synonym: Franean1_2250
Alternate gene names: 158314083
Gene position: 2688211-2688684 (Clockwise)
Preceding gene: 158314082
Following gene: 158314084
Centisome position: 29.93
GC content: 60.13
Gene sequence:
>474_bases GTGCGTGGCGACGAACAGATCGTCGAGAGCCTGAACGCTGTTCTGACGAACGAGCTGACCGCGATCAACCAGTACTTTCT GCATTCGAGAATGCAGCGTAACTGGGGATATCGGTACATATCGGAGCATTACTACCACGAGTCGATCGATGAGATGAAGC ATGCGGACAAGCTCATCCACCGCGTGCTCTACCTGGGCGGACTGCCCAATCTCCAGCGGCTGCACACACTGCGTATTGGT GAGACCGTGCCCGAGCAGCTGGGGCTCGACCGCACCCACGAGACGAACGCGGTCGACACGCTGCGCGAGGCGATCGTGCT GAGCCGCACGAAGAACGACATCGGCTCGGCCGTGCTCCTGGAAGAGATCCTCACCTCCGAAGAGGAGCACATCGACTGGC TCGACTCCCAGCTTGAGCTCATTTCACAGCTCGGCGCGACCGAGTACCTCTCCCAGCAGATCCGCGAGGACTGA
Upstream 100 bases:
>100_bases TGGTCGGGTTCGTCTGCCGTACCGGTGACGACATCGCTGCCGGATGTCGGCCGAGTCGTCCCGGGGCGGCTCCGGGCGAC CCTCGCGGAGGTAACCGGCG
Downstream 100 bases:
>100_bases GCCGGGCCGGACGGTGACGGACAGGAGGCGGGGCGCGCCGTACGGCCGATGAACGGTACGCCACAATGCCCCGGACCACA CCTGTGTGCGTCCGTGGGGG
Product: bacterioferritin
Products: NA
Alternate protein names: BFR; Cytochrome b-557.5 [H]
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRGDEQIVESLNAVLTNELTAINQYFLHSRMQRNWGYRYISEHYYHESIDEMKHADKLIHRVLYLGGLPNLQRLHTLRIG ETVPEQLGLDRTHETNAVDTLREAIVLSRTKNDIGSAVLLEEILTSEEEHIDWLDSQLELISQLGATEYLSQQIRED
Sequences:
>Translated_157_residues MRGDEQIVESLNAVLTNELTAINQYFLHSRMQRNWGYRYISEHYYHESIDEMKHADKLIHRVLYLGGLPNLQRLHTLRIG ETVPEQLGLDRTHETNAVDTLREAIVLSRTKNDIGSAVLLEEILTSEEEHIDWLDSQLELISQLGATEYLSQQIRED >Mature_157_residues MRGDEQIVESLNAVLTNELTAINQYFLHSRMQRNWGYRYISEHYYHESIDEMKHADKLIHRVLYLGGLPNLQRLHTLRIG ETVPEQLGLDRTHETNAVDTLREAIVLSRTKNDIGSAVLLEEILTSEEEHIDWLDSQLELISQLGATEYLSQQIRED
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=157, Percent_Identity=51.5923566878981, Blast_Score=159, Evalue=8e-41,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18270; Mature: 18270
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGDEQIVESLNAVLTNELTAINQYFLHSRMQRNWGYRYISEHYYHESIDEMKHADKLIH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RVLYLGGLPNLQRLHTLRIGETVPEQLGLDRTHETNAVDTLREAIVLSRTKNDIGSAVLL HHHHHCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EEILTSEEEHIDWLDSQLELISQLGATEYLSQQIRED HHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC >Mature Secondary Structure MRGDEQIVESLNAVLTNELTAINQYFLHSRMQRNWGYRYISEHYYHESIDEMKHADKLIH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RVLYLGGLPNLQRLHTLRIGETVPEQLGLDRTHETNAVDTLREAIVLSRTKNDIGSAVLL HHHHHCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EEILTSEEEHIDWLDSQLELISQLGATEYLSQQIRED HHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1549605; 1904771 [H]