| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314080
Identifier: 158314080
GI number: 158314080
Start: 2686313
End: 2686714
Strand: Direct
Name: 158314080
Synonym: Franean1_2247
Alternate gene names: NA
Gene position: 2686313-2686714 (Clockwise)
Preceding gene: 158314079
Following gene: 158314081
Centisome position: 29.91
GC content: 69.15
Gene sequence:
>402_bases ATGGGCGACTCAAGTATGGGGCTACACGAGCCGGCGGACGCGCTCACGCCCGGCATCGTCGATCGCCACCGGGCGATCGC GTCGCTGATGGAAGAGCTGGAGGCGGTCGACTGGTACGACCAACGGGTGCAGGCGGCCACGGATCCGGAACTGGCTGCGG TGCTGGCGCACAACCGGGACGAGGAGAAGGAACACGCGGCGATGACGCTGGAGTGGCTGCGTCGCCGCGACCCCGTCCTC GATTCGCAGCTGCGCACGTATCTGTTCACCTCGGTCCCGGTCACGGAGGTCGAGGAAGAGGCGATGAGCGACGAGGGACC CGACGGCGACGCGGCCGCGCGCGCCACGGAGCCGGCGGACGGCTCGCTGGGAATCGGTGGCCTGAAAGGTGTGAGCGAGT GA
Upstream 100 bases:
>100_bases AACAAAGTGGGACGTATCGCCTCACATCAGGACGTCGACTGTTCGTGAACCGATGCCGTCCCGGCGGGTTGGTGGGCCCG GGCGTGGTAGGTAGTGCCGT
Downstream 100 bases:
>100_bases ACCATCTTCTGCGTGGGCATGCGCCCCTGAGCGAGGAAGCCTGGAAGGCCGTCGACGAGGAGGCCCGTTCCCGCCTCACG ACCAACCTCGCCGCCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MGDSSMGLHEPADALTPGIVDRHRAIASLMEELEAVDWYDQRVQAATDPELAAVLAHNRDEEKEHAAMTLEWLRRRDPVL DSQLRTYLFTSVPVTEVEEEAMSDEGPDGDAAARATEPADGSLGIGGLKGVSE
Sequences:
>Translated_133_residues MGDSSMGLHEPADALTPGIVDRHRAIASLMEELEAVDWYDQRVQAATDPELAAVLAHNRDEEKEHAAMTLEWLRRRDPVL DSQLRTYLFTSVPVTEVEEEAMSDEGPDGDAAARATEPADGSLGIGGLKGVSE >Mature_132_residues GDSSMGLHEPADALTPGIVDRHRAIASLMEELEAVDWYDQRVQAATDPELAAVLAHNRDEEKEHAAMTLEWLRRRDPVLD SQLRTYLFTSVPVTEVEEEAMSDEGPDGDAAARATEPADGSLGIGGLKGVSE
Specific function: Unknown
COG id: COG3461
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14428; Mature: 14297
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDSSMGLHEPADALTPGIVDRHRAIASLMEELEAVDWYDQRVQAATDPELAAVLAHNRD CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC EEKEHAAMTLEWLRRRDPVLDSQLRTYLFTSVPVTEVEEEAMSDEGPDGDAAARATEPAD CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC GSLGIGGLKGVSE CCCCCCCCCCCCC >Mature Secondary Structure GDSSMGLHEPADALTPGIVDRHRAIASLMEELEAVDWYDQRVQAATDPELAAVLAHNRD CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC EEKEHAAMTLEWLRRRDPVLDSQLRTYLFTSVPVTEVEEEAMSDEGPDGDAAARATEPAD CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC GSLGIGGLKGVSE CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA