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The map label for this gene is 158314081

Identifier: 158314081

GI number: 158314081

Start: 2686711

End: 2687541

Strand: Direct

Name: 158314081

Synonym: Franean1_2248

Alternate gene names: NA

Gene position: 2686711-2687541 (Clockwise)

Preceding gene: 158314080

Following gene: 158314082

Centisome position: 29.91

GC content: 72.2

Gene sequence:

>831_bases
GTGAACCATCTTCTGCGTGGGCATGCGCCCCTGAGCGAGGAAGCCTGGAAGGCCGTCGACGAGGAGGCCCGTTCCCGCCT
CACGACCAACCTCGCCGCCCGCAAGCTCATCGACTTCGCCGGACCGCACGGGTGGGCGTACTCGGCCACGCCGATCGGCC
GGGTGACGGCGCTGCAGGCGCCGCCGGGCGAGGGCGTGCGTGCCCGGCTGCGCCGGGTCCTGCCCGTGATGGAGCTGCGG
GCGGCGTTCTCCATCGACCGCGGCGAGCTGGACGCGATCGACCGCGGCGCGGACGACATCGACCTGTCGGCGCTGGAGGA
GGCGGCCCGCCGGGTCGCCACGACCGAGAACTCCGTCGTCTTCCACGGCTACGCCGAGGCGGGGATCATCGGCATCACCG
AGGCGTCGTCCCACCCGGTGCTTGAGCTGGGGGCCGACACCGACAGCTACCCGCGCACGGTCGCCAAGGCGGTCGCCCTG
CTGCGCCGGGCGGGTATCGGTGGGCCGTACGGGCTGGCCATCGACCCGGACGGCTACACCGCGATCCTGGAGGCCACCGA
GCACGGCGGCTATCTGCTGCTCAACCATCTCAAGCAGATCCTCGACGGCCCTGTGGTGCGGGCTCCGGGGGTGCGCGGCG
CGGTGGTGCTGAGCCAGCGGGGCGGTGACTTCATCCTCGAGTCGGGCCAGGACCTCTCTGTCGGCTACTCCTCGCACACC
GCCGAGGAGGTCGAGCTGTACCTGGAGCAGAGCTTCAGCTTCCGGGTCACCGAGCCCGACGCGGCGGTCGCGCTGGTGTC
CAGCACGGACCGTCCGGCCAGCCAGGCCTGA

Upstream 100 bases:

>100_bases
AGGCGATGAGCGACGAGGGACCCGACGGCGACGCGGCCGCGCGCGCCACGGAGCCGGCGGACGGCTCGCTGGGAATCGGT
GGCCTGAAAGGTGTGAGCGA

Downstream 100 bases:

>100_bases
GTCGCCAGGCCTCGACGGTGGCCGCTGGTTGTGCGCAGCGTTCGCGTGATGGCGAATCGCGTGCCTGGCGGTCACTGTCG
GTCCCGGTTGCTAGCGGTAG

Product: Linocin_M18 bacteriocin protein

Products: NA

Alternate protein names: Thermotoga bacteriocin [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNHLLRGHAPLSEEAWKAVDEEARSRLTTNLAARKLIDFAGPHGWAYSATPIGRVTALQAPPGEGVRARLRRVLPVMELR
AAFSIDRGELDAIDRGADDIDLSALEEAARRVATTENSVVFHGYAEAGIIGITEASSHPVLELGADTDSYPRTVAKAVAL
LRRAGIGGPYGLAIDPDGYTAILEATEHGGYLLLNHLKQILDGPVVRAPGVRGAVVLSQRGGDFILESGQDLSVGYSSHT
AEEVELYLEQSFSFRVTEPDAAVALVSSTDRPASQA

Sequences:

>Translated_276_residues
MNHLLRGHAPLSEEAWKAVDEEARSRLTTNLAARKLIDFAGPHGWAYSATPIGRVTALQAPPGEGVRARLRRVLPVMELR
AAFSIDRGELDAIDRGADDIDLSALEEAARRVATTENSVVFHGYAEAGIIGITEASSHPVLELGADTDSYPRTVAKAVAL
LRRAGIGGPYGLAIDPDGYTAILEATEHGGYLLLNHLKQILDGPVVRAPGVRGAVVLSQRGGDFILESGQDLSVGYSSHT
AEEVELYLEQSFSFRVTEPDAAVALVSSTDRPASQA
>Mature_276_residues
MNHLLRGHAPLSEEAWKAVDEEARSRLTTNLAARKLIDFAGPHGWAYSATPIGRVTALQAPPGEGVRARLRRVLPVMELR
AAFSIDRGELDAIDRGADDIDLSALEEAARRVATTENSVVFHGYAEAGIIGITEASSHPVLELGADTDSYPRTVAKAVAL
LRRAGIGGPYGLAIDPDGYTAILEATEHGGYLLLNHLKQILDGPVVRAPGVRGAVVLSQRGGDFILESGQDLSVGYSSHT
AEEVELYLEQSFSFRVTEPDAAVALVSSTDRPASQA

Specific function: Protease that exhibits activity toward chymotrypsin and trypsin substrates. May have antibacterial activity [H]

COG id: COG1659

COG function: function code S; Uncharacterized protein, linocin/CFP29 homolog

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U56 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007544 [H]

Pfam domain/function: PF04454 Linocin_M18 [H]

EC number: NA

Molecular weight: Translated: 29413; Mature: 29413

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLLRGHAPLSEEAWKAVDEEARSRLTTNLAARKLIDFAGPHGWAYSATPIGRVTALQA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECC
PPGEGVRARLRRVLPVMELRAAFSIDRGELDAIDRGADDIDLSALEEAARRVATTENSVV
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCEE
FHGYAEAGIIGITEASSHPVLELGADTDSYPRTVAKAVALLRRAGIGGPYGLAIDPDGYT
EEEECCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCE
AILEATEHGGYLLLNHLKQILDGPVVRAPGVRGAVVLSQRGGDFILESGQDLSVGYSSHT
EEEEECCCCCCHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCEEEECCCCCEECCCCCC
AEEVELYLEQSFSFRVTEPDAAVALVSSTDRPASQA
HHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MNHLLRGHAPLSEEAWKAVDEEARSRLTTNLAARKLIDFAGPHGWAYSATPIGRVTALQA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECC
PPGEGVRARLRRVLPVMELRAAFSIDRGELDAIDRGADDIDLSALEEAARRVATTENSVV
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCEE
FHGYAEAGIIGITEASSHPVLELGADTDSYPRTVAKAVALLRRAGIGGPYGLAIDPDGYT
EEEECCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCE
AILEATEHGGYLLLNHLKQILDGPVVRAPGVRGAVVLSQRGGDFILESGQDLSVGYSSHT
EEEEECCCCCCHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCEEEECCCCCEECCCCCC
AEEVELYLEQSFSFRVTEPDAAVALVSSTDRPASQA
HHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]