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The map label for this gene is ydiF [H]

Identifier: 158314037

GI number: 158314037

Start: 2636199

End: 2637812

Strand: Direct

Name: ydiF [H]

Synonym: Franean1_2204

Alternate gene names: 158314037

Gene position: 2636199-2637812 (Clockwise)

Preceding gene: 158314035

Following gene: 158314038

Centisome position: 29.35

GC content: 71.31

Gene sequence:

>1614_bases
ATGATCATCGTGTCCGAGCTCGAGCTCCGTGCCGGAGCCCGCACACTGATCGAGCCGGTCTCGTTCCGGGTGCAGCCGGG
TGACCGTATCGGCCTCGTCGGCCGCAACGGCGCCGGCAAGACGACGATGCTGAAGACGCTCGCGGGGGAGACCCTGCCCT
TCGCCGGCAAGGTGGACATCCGCGGCGAGATCGGCTACCTGCCGCAGGACCCGCGCACCGGCGACCTCGCCGACACCGCC
CGCGACCGCGTGCTCGCCGCCCGAGGCCTCGACGTGATCCTGCGCGAGATGGAGAAGCTCCAGCTCGAGATGGCCGAGTT
CGTCGACGAGACGGCCCGCGACACCGCGGTGCGTCGCTACGGCCGGCTGGAGGAGCGGTTCGGGATGCTCGGCGGGTACG
CCGCCGAGGCGGAGGCGGCGCGGATCTGCTCCTCACTCGGCCTGCCCGACCGGGTTCTCGGCCAGCAGATCGGAACGCTC
TCGGGTGGCCAGCGCCGCCGCGTCGAGCTGGCCCGGATCCTGTTCGCCGGTTCGGGGAACTCCGACGCGACACTGCTGCT
CGACGAGCCGACCAACCACCTCGACGCCGACTCGATCACCTGGCTGCGTGACTTCCTGCGCGCCCATTCCGGCGGCCTGA
TCGTCATCAGCCACGACGTCGACCTGCTGGACAAGAGTGTGAACAAGGTTTTCCATCTCGACGCCAACCGCGCCGCGCTC
GACGTCTACAACGTCAACTGGAAGACCTATCTCACCCAGCGCGATCAGGACGAGCGCCGCCGGCGGCGGGAGCGGGCCAA
CGCGGAGAAGAAGATCGACTCGTTGCGGGCGCAGGCCGACAAGATGCGGGCGAAGGCCACCAAGGCGCGCGCGGCACACC
AGATGGACCGCCGCGCGGAGCGCCTCGCCTCCGGCCTCGCCGAGGTCCGGGTCGCCGACCGGGTCGCCAAGCTGCGCTTC
CCCGATCCGGCTCCGTGCGGCCGCACGCCGCTGACCGCCACCGGCCTGTCGAAGTCCTACGGCTCGCTGGAGGTGTTCAC
CGGCGTCGACCTGGCGATCGACCGCGGCACCCGGGTCGTGGTCCTGGGCCTCAACGGCGCCGGCAAGACGACGCTGCTGC
GCATGCTCGCCGGCCAGGAGACCCCGGACGCCGGCGAGGTGCACCCGGGGCACGGCCTGCGCCTGGGGTACTACGCGCAG
GAGCACGAGACGCTCGACACCTCCCGCACGGTGCTCGACAACATGCGCGCCGCGGCGCCCACCGCCTCCGACGTCGACCT
GCGTCGCATCCTGGGCGCATTCCTGTTCGGGGGGGACGCGGTCGAACAGCTCGCCGAGACGCTCTCCGGCGGTGAGAAGA
CCCGGCTGGCCCTGGCTGGCCTGGTCTGCAGCTCGGCGAACGTGCTGCTGCTCGACGAGCCGACGAACAACCTCGACCCG
GCGTCGCGCGACGAGGTCCTGAGCGCACTGCGCACCTACCGGGGCTCGGTGGTCCTCGTCACGCACGACCCGGGCGCGGT
CGAGGCACTGAGCCCCGACAAGGTCCTGATGCTGCCGGACGGCGTCGAGGACACCTGGTCGCCCGACCTCGCCGATCTCG
TCACCCTGGCCTGA

Upstream 100 bases:

>100_bases
GTCGTGAGGCGGGCGTTTCCCAGGCACTCCGGTGTCGTGGTGGCCAGCCGCTGACACCTGATACGCGCACGAATCCGATG
TACGAAAGAGGCCGACCCTC

Downstream 100 bases:

>100_bases
TACCACGGGAGCACCCGGCGGCGCCCGGAGGTGGCCACCTTGACACACTGGGCCCTCGGTTCGGGCGCCCATCGGCGCGC
GGGAGACAGAACACGGGACG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MIIVSELELRAGARTLIEPVSFRVQPGDRIGLVGRNGAGKTTMLKTLAGETLPFAGKVDIRGEIGYLPQDPRTGDLADTA
RDRVLAARGLDVILREMEKLQLEMAEFVDETARDTAVRRYGRLEERFGMLGGYAAEAEAARICSSLGLPDRVLGQQIGTL
SGGQRRRVELARILFAGSGNSDATLLLDEPTNHLDADSITWLRDFLRAHSGGLIVISHDVDLLDKSVNKVFHLDANRAAL
DVYNVNWKTYLTQRDQDERRRRRERANAEKKIDSLRAQADKMRAKATKARAAHQMDRRAERLASGLAEVRVADRVAKLRF
PDPAPCGRTPLTATGLSKSYGSLEVFTGVDLAIDRGTRVVVLGLNGAGKTTLLRMLAGQETPDAGEVHPGHGLRLGYYAQ
EHETLDTSRTVLDNMRAAAPTASDVDLRRILGAFLFGGDAVEQLAETLSGGEKTRLALAGLVCSSANVLLLDEPTNNLDP
ASRDEVLSALRTYRGSVVLVTHDPGAVEALSPDKVLMLPDGVEDTWSPDLADLVTLA

Sequences:

>Translated_537_residues
MIIVSELELRAGARTLIEPVSFRVQPGDRIGLVGRNGAGKTTMLKTLAGETLPFAGKVDIRGEIGYLPQDPRTGDLADTA
RDRVLAARGLDVILREMEKLQLEMAEFVDETARDTAVRRYGRLEERFGMLGGYAAEAEAARICSSLGLPDRVLGQQIGTL
SGGQRRRVELARILFAGSGNSDATLLLDEPTNHLDADSITWLRDFLRAHSGGLIVISHDVDLLDKSVNKVFHLDANRAAL
DVYNVNWKTYLTQRDQDERRRRRERANAEKKIDSLRAQADKMRAKATKARAAHQMDRRAERLASGLAEVRVADRVAKLRF
PDPAPCGRTPLTATGLSKSYGSLEVFTGVDLAIDRGTRVVVLGLNGAGKTTLLRMLAGQETPDAGEVHPGHGLRLGYYAQ
EHETLDTSRTVLDNMRAAAPTASDVDLRRILGAFLFGGDAVEQLAETLSGGEKTRLALAGLVCSSANVLLLDEPTNNLDP
ASRDEVLSALRTYRGSVVLVTHDPGAVEALSPDKVLMLPDGVEDTWSPDLADLVTLA
>Mature_537_residues
MIIVSELELRAGARTLIEPVSFRVQPGDRIGLVGRNGAGKTTMLKTLAGETLPFAGKVDIRGEIGYLPQDPRTGDLADTA
RDRVLAARGLDVILREMEKLQLEMAEFVDETARDTAVRRYGRLEERFGMLGGYAAEAEAARICSSLGLPDRVLGQQIGTL
SGGQRRRVELARILFAGSGNSDATLLLDEPTNHLDADSITWLRDFLRAHSGGLIVISHDVDLLDKSVNKVFHLDANRAAL
DVYNVNWKTYLTQRDQDERRRRRERANAEKKIDSLRAQADKMRAKATKARAAHQMDRRAERLASGLAEVRVADRVAKLRF
PDPAPCGRTPLTATGLSKSYGSLEVFTGVDLAIDRGTRVVVLGLNGAGKTTLLRMLAGQETPDAGEVHPGHGLRLGYYAQ
EHETLDTSRTVLDNMRAAAPTASDVDLRRILGAFLFGGDAVEQLAETLSGGEKTRLALAGLVCSSANVLLLDEPTNNLDP
ASRDEVLSALRTYRGSVVLVTHDPGAVEALSPDKVLMLPDGVEDTWSPDLADLVTLA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=508, Percent_Identity=30.1181102362205, Blast_Score=202, Evalue=7e-52,
Organism=Homo sapiens, GI10947137, Length=511, Percent_Identity=29.7455968688845, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI27881506, Length=511, Percent_Identity=29.7455968688845, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI69354671, Length=512, Percent_Identity=32.421875, Blast_Score=188, Evalue=9e-48,
Organism=Homo sapiens, GI10947135, Length=512, Percent_Identity=32.421875, Blast_Score=188, Evalue=9e-48,
Organism=Homo sapiens, GI116734710, Length=240, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI153792144, Length=172, Percent_Identity=32.5581395348837, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI27477115, Length=188, Percent_Identity=28.1914893617021, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1789751, Length=524, Percent_Identity=32.4427480916031, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI1787041, Length=539, Percent_Identity=32.6530612244898, Blast_Score=259, Evalue=4e-70,
Organism=Escherichia coli, GI2367384, Length=504, Percent_Identity=34.1269841269841, Blast_Score=232, Evalue=4e-62,
Organism=Escherichia coli, GI1787182, Length=496, Percent_Identity=29.8387096774194, Blast_Score=191, Evalue=1e-49,
Organism=Escherichia coli, GI87081782, Length=537, Percent_Identity=26.0707635009311, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1787164, Length=205, Percent_Identity=36.0975609756098, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788761, Length=218, Percent_Identity=31.1926605504587, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789873, Length=211, Percent_Identity=33.175355450237, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787370, Length=227, Percent_Identity=29.5154185022026, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788165, Length=206, Percent_Identity=32.5242718446602, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786703, Length=196, Percent_Identity=31.6326530612245, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1790467, Length=209, Percent_Identity=31.1004784688995, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788225, Length=202, Percent_Identity=29.2079207920792, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786253, Length=179, Percent_Identity=30.7262569832402, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787105, Length=202, Percent_Identity=30.6930693069307, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786398, Length=205, Percent_Identity=31.219512195122, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787112, Length=220, Percent_Identity=29.5454545454545, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787792, Length=207, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786563, Length=202, Percent_Identity=29.2079207920792, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788450, Length=204, Percent_Identity=25.4901960784314, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1789593, Length=194, Percent_Identity=30.4123711340206, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1790534, Length=207, Percent_Identity=28.5024154589372, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=521, Percent_Identity=29.3666026871401, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17555318, Length=513, Percent_Identity=29.0448343079922, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17553372, Length=527, Percent_Identity=29.2220113851992, Blast_Score=182, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17565586, Length=243, Percent_Identity=27.5720164609054, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI115533608, Length=217, Percent_Identity=29.0322580645161, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=509, Percent_Identity=30.0589390962672, Blast_Score=215, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6320874, Length=542, Percent_Identity=29.1512915129151, Blast_Score=196, Evalue=6e-51,
Organism=Saccharomyces cerevisiae, GI6325030, Length=408, Percent_Identity=25.2450980392157, Blast_Score=121, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=184, Percent_Identity=32.0652173913043, Blast_Score=83, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6323278, Length=176, Percent_Identity=28.9772727272727, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24666836, Length=533, Percent_Identity=30.0187617260788, Blast_Score=222, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24641342, Length=521, Percent_Identity=32.4376199616123, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24642252, Length=499, Percent_Identity=29.8597194388778, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI18859989, Length=499, Percent_Identity=29.8597194388778, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI116007184, Length=176, Percent_Identity=30.6818181818182, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221500365, Length=176, Percent_Identity=30.6818181818182, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24666092, Length=207, Percent_Identity=29.951690821256, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24582014, Length=187, Percent_Identity=29.9465240641711, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24582012, Length=187, Percent_Identity=29.9465240641711, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85724858, Length=181, Percent_Identity=31.4917127071823, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85724856, Length=181, Percent_Identity=31.4917127071823, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580547, Length=181, Percent_Identity=31.4917127071823, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580551, Length=181, Percent_Identity=31.4917127071823, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580549, Length=181, Percent_Identity=31.4917127071823, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580545, Length=181, Percent_Identity=31.4917127071823, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643674, Length=205, Percent_Identity=29.7560975609756, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281363262, Length=203, Percent_Identity=30.5418719211823, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653245, Length=203, Percent_Identity=30.5418719211823, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58322; Mature: 58322

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVSELELRAGARTLIEPVSFRVQPGDRIGLVGRNGAGKTTMLKTLAGETLPFAGKVDI
CEEEEECHHHCCHHHHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEE
RGEIGYLPQDPRTGDLADTARDRVLAARGLDVILREMEKLQLEMAEFVDETARDTAVRRY
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRLEERFGMLGGYAAEAEAARICSSLGLPDRVLGQQIGTLSGGQRRRVELARILFAGSGN
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHEEEHEEEECCCC
SDATLLLDEPTNHLDADSITWLRDFLRAHSGGLIVISHDVDLLDKSVNKVFHLDANRAAL
CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHEEEECCCCEEE
DVYNVNWKTYLTQRDQDERRRRRERANAEKKIDSLRAQADKMRAKATKARAAHQMDRRAE
EEEECCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLASGLAEVRVADRVAKLRFPDPAPCGRTPLTATGLSKSYGSLEVFTGVDLAIDRGTRVV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCEEEEECCCEEE
VLGLNGAGKTTLLRMLAGQETPDAGEVHPGHGLRLGYYAQEHETLDTSRTVLDNMRAAAP
EEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCC
TASDVDLRRILGAFLFGGDAVEQLAETLSGGEKTRLALAGLVCSSANVLLLDEPTNNLDP
CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC
ASRDEVLSALRTYRGSVVLVTHDPGAVEALSPDKVLMLPDGVEDTWSPDLADLVTLA
CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MIIVSELELRAGARTLIEPVSFRVQPGDRIGLVGRNGAGKTTMLKTLAGETLPFAGKVDI
CEEEEECHHHCCHHHHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEE
RGEIGYLPQDPRTGDLADTARDRVLAARGLDVILREMEKLQLEMAEFVDETARDTAVRRY
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRLEERFGMLGGYAAEAEAARICSSLGLPDRVLGQQIGTLSGGQRRRVELARILFAGSGN
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHEEEHEEEECCCC
SDATLLLDEPTNHLDADSITWLRDFLRAHSGGLIVISHDVDLLDKSVNKVFHLDANRAAL
CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHEEEECCCCEEE
DVYNVNWKTYLTQRDQDERRRRRERANAEKKIDSLRAQADKMRAKATKARAAHQMDRRAE
EEEECCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLASGLAEVRVADRVAKLRFPDPAPCGRTPLTATGLSKSYGSLEVFTGVDLAIDRGTRVV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCEEEEECCCEEE
VLGLNGAGKTTLLRMLAGQETPDAGEVHPGHGLRLGYYAQEHETLDTSRTVLDNMRAAAP
EEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCC
TASDVDLRRILGAFLFGGDAVEQLAETLSGGEKTRLALAGLVCSSANVLLLDEPTNNLDP
CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC
ASRDEVLSALRTYRGSVVLVTHDPGAVEALSPDKVLMLPDGVEDTWSPDLADLVTLA
CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]