| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314035
Identifier: 158314035
GI number: 158314035
Start: 2634451
End: 2635182
Strand: Direct
Name: 158314035
Synonym: Franean1_2202
Alternate gene names: NA
Gene position: 2634451-2635182 (Clockwise)
Preceding gene: 158314034
Following gene: 158314037
Centisome position: 29.33
GC content: 72.95
Gene sequence:
>732_bases ATGGGAACAGAAGATCTCGCCACGGAACGGCTCGCCAACCTGCGGGACGTCGGCGGCATGACCACCACGGACGACCGCGT CACCAACACGGGCGTGCTGTACCGCAGCGAGATGCCCCGGGTCGAGGACGCCCGGCCGGCGACGGAGTTCACCTGGCCCC CGCCGACCGTGGTCGATCTGCGCTCCGCGGTCGAGCGGGGGAGCTCCCCGCACCCGCTGTCGCTGATCGGCTCGGAGATC CACGTGATGCCCCTGCTCGGCGAGGAGACCGGCCGGGTCAGCGACTCCCTGCCGCCGGACGCGCTCGCGGGCGGCCTGCG CACGCTGTACGCCGCGATGCTCGACATCGCGACGCCCCGGCTGGTGGAGATCCTCGACCTGGCGGCGGAGGCCCCCGGTC CGCTCCTGGTGCACTGCGCGGCCGGCAAGGACCGCACGGGCGTGGTCGTCGCCCTCCTCCTGCGCCTGGCCGGTGTCGTC CCGGAGCAGGTGGTCGCCGACTACCTGGTTACCGGCGAGAACATGCCGGGCGTGCTGCGCCGCCTGCGAGGGCACGCGAT CCTCCCCGACGGCCGGGTCGTCGACAAGGAGGTCACCAAGGTCTCGGTGGACGCCGTCAAGCAGGTGCTGACCATCATCG ACGGGCACCCGCAGGGCCCGGAGGGCTGGTTCCTCGACCGCGGCGCCCGGCCCGAGGCCGTCGAACTCTGGCGCAAGCGC ATCCTGGGCTGA
Upstream 100 bases:
>100_bases ACACCGAGGCCAGGGCCTGACCTGGCCCGCCCGGCCCGGCCACCCGCCCGACGGAGGCAGTCGGGACCCTGCGTGCACCG CGCTCTCAGGAGGACATCGG
Downstream 100 bases:
>100_bases GTCCGGGGCGACCATTGCCGTCGCTCGGCGAGGGCTCACGGTTCTGGCCTCGGTGGCTGGCCGGGGAGTCCGGCTCAGTT ACTCGCCCTTAGTTTCTTCC
Product: protein tyrosine/serine phosphatase
Products: NA
Alternate protein names: Protein-Tyrosine-Phosphatase; Tyrosine Specific Protein Phosphatase
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MGTEDLATERLANLRDVGGMTTTDDRVTNTGVLYRSEMPRVEDARPATEFTWPPPTVVDLRSAVERGSSPHPLSLIGSEI HVMPLLGEETGRVSDSLPPDALAGGLRTLYAAMLDIATPRLVEILDLAAEAPGPLLVHCAAGKDRTGVVVALLLRLAGVV PEQVVADYLVTGENMPGVLRRLRGHAILPDGRVVDKEVTKVSVDAVKQVLTIIDGHPQGPEGWFLDRGARPEAVELWRKR ILG
Sequences:
>Translated_243_residues MGTEDLATERLANLRDVGGMTTTDDRVTNTGVLYRSEMPRVEDARPATEFTWPPPTVVDLRSAVERGSSPHPLSLIGSEI HVMPLLGEETGRVSDSLPPDALAGGLRTLYAAMLDIATPRLVEILDLAAEAPGPLLVHCAAGKDRTGVVVALLLRLAGVV PEQVVADYLVTGENMPGVLRRLRGHAILPDGRVVDKEVTKVSVDAVKQVLTIIDGHPQGPEGWFLDRGARPEAVELWRKR ILG >Mature_242_residues GTEDLATERLANLRDVGGMTTTDDRVTNTGVLYRSEMPRVEDARPATEFTWPPPTVVDLRSAVERGSSPHPLSLIGSEIH VMPLLGEETGRVSDSLPPDALAGGLRTLYAAMLDIATPRLVEILDLAAEAPGPLLVHCAAGKDRTGVVVALLLRLAGVVP EQVVADYLVTGENMPGVLRRLRGHAILPDGRVVDKEVTKVSVDAVKQVLTIIDGHPQGPEGWFLDRGARPEAVELWRKRI LG
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26148; Mature: 26017
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTEDLATERLANLRDVGGMTTTDDRVTNTGVLYRSEMPRVEDARPATEFTWPPPTVVDL CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHH RSAVERGSSPHPLSLIGSEIHVMPLLGEETGRVSDSLPPDALAGGLRTLYAAMLDIATPR HHHHHCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH LVEILDLAAEAPGPLLVHCAAGKDRTGVVVALLLRLAGVVPEQVVADYLVTGENMPGVLR HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHH RLRGHAILPDGRVVDKEVTKVSVDAVKQVLTIIDGHPQGPEGWFLDRGARPEAVELWRKR HHCCCEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHH ILG HCC >Mature Secondary Structure GTEDLATERLANLRDVGGMTTTDDRVTNTGVLYRSEMPRVEDARPATEFTWPPPTVVDL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHH RSAVERGSSPHPLSLIGSEIHVMPLLGEETGRVSDSLPPDALAGGLRTLYAAMLDIATPR HHHHHCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH LVEILDLAAEAPGPLLVHCAAGKDRTGVVVALLLRLAGVVPEQVVADYLVTGENMPGVLR HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHH RLRGHAILPDGRVVDKEVTKVSVDAVKQVLTIIDGHPQGPEGWFLDRGARPEAVELWRKR HHCCCEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHH ILG HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA