| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yiiP [C]
Identifier: 158314038
GI number: 158314038
Start: 2637926
End: 2638879
Strand: Direct
Name: yiiP [C]
Synonym: Franean1_2205
Alternate gene names: 158314038
Gene position: 2637926-2638879 (Clockwise)
Preceding gene: 158314037
Following gene: 158314040
Centisome position: 29.37
GC content: 71.49
Gene sequence:
>954_bases GTGAGCACAGAAGGCGGCACCAAGGCGGTCGTGGCGGCACTGCTCGCGAACCTGGGCATCGCGGTCGCGAAGTTCGTGGC GTTCCTCTTCACCCGTTCGTCGTCCATGCTCGCCGAGTCGATCCACTCCGTCGCCGACTCGAGCAACCAGGCGTTGCTCC TGCTCGGGCAGCGCAACGCCAGCCAGCCGGCGGACGAGGAGCACCCCTTCGGCTACGGGCGTTCCCGCTACATCGCGGGC TTCCTCGTCGGCATCGTGCTGTTCAGCGTCGGCGGGCTGTTCTCCGTCTACGAGGGCGTGGAGAAGCTGCGCCACCCCCA CGAGCTGGAGAGCGGCGTGGTGGCGATCGTGGTCCTCGCCGTCGCGATCGTGCTCGAGAGTTTCTCGTTCCGGACGGCCA TCAAGGAGTCGAGGCATCTCAAGGGCTCGGGGTCGTGGTGGCGCTTCATCCGGGACGCGCGCTCCCCGGAGCTGCCGGTC GTCCTGCTGGAGGACCTGGCCGCGCTGTGCGGCCTGGTGTTCGCCCTGGCCGGGGTCGGCCTGACGCTGCTGCTCGACGA ACCGCTCTGGGACGGCGCCGGCACCCTCGCGATCGGCATCCTGCTGCTGGCCGTCGCCGTGATCGTCGCGATGGAGACCT ACGGGATGCTGGTCGGGGAGGCCGCCACCCCGCAGACCGTCGAGGCGATCCGGCGGGCGCTGAGCTCGGCGCCGGCGGTC ACCACCGTGATCCACATGCGGACCCTGCACCTCGGCCCGGACGAGCTTCTGGTCGCGGCCAAGATCGGGCTCGACCCGGA TCTGACCACGGCCCAGGTCGCCGCCGCCATCAACGAGGCCGAGGCGCTGCTGCGCGACGCCGTGCCCACCGCGCGCCGGG TCTACCTCGAACCCGACATGCCGCGGGGCGAGGTGGCCCAGCCGGTGCCGCCCGCCGCCGCCGAGCGTGCCTGA
Upstream 100 bases:
>100_bases CCCGGCGGCGCCCGGAGGTGGCCACCTTGACACACTGGGCCCTCGGTTCGGGCGCCCATCGGCGCGCGGGAGACAGAACA CGGGACGAGAGCGGGAGCAC
Downstream 100 bases:
>100_bases TCGCCAAGCCCATCTGATCGCCGAGCCCGCCTGGGCCACGAGGCGTTCGGGCGCGTTCTCCGGCCGGGTCCGCGCAGCTC AGCCGTTCCCGAGGAAGACC
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: Cation Efflux Family Protein; Cation Transporter; Cation Efflux Protein; Integral Membrane Protein; Membrane Transporter; Co/Zn/Cd Cation Transporter; Cation Diffusion Facilitator Family Protein; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; CDF Family Transporter; Cation-Efflux Pump; Cation Transporter Permease Component; Cation Efflux Transporter; CDF Family Heavy Metal/H(+) Antiporter; Zinc/Cadmium/Cations Transporter; CDF Family Cation Efflux Protein; Cation Transporter Protein; Cation Efflux System
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSTEGGTKAVVAALLANLGIAVAKFVAFLFTRSSSMLAESIHSVADSSNQALLLLGQRNASQPADEEHPFGYGRSRYIAG FLVGIVLFSVGGLFSVYEGVEKLRHPHELESGVVAIVVLAVAIVLESFSFRTAIKESRHLKGSGSWWRFIRDARSPELPV VLLEDLAALCGLVFALAGVGLTLLLDEPLWDGAGTLAIGILLLAVAVIVAMETYGMLVGEAATPQTVEAIRRALSSAPAV TTVIHMRTLHLGPDELLVAAKIGLDPDLTTAQVAAAINEAEALLRDAVPTARRVYLEPDMPRGEVAQPVPPAAAERA
Sequences:
>Translated_317_residues MSTEGGTKAVVAALLANLGIAVAKFVAFLFTRSSSMLAESIHSVADSSNQALLLLGQRNASQPADEEHPFGYGRSRYIAG FLVGIVLFSVGGLFSVYEGVEKLRHPHELESGVVAIVVLAVAIVLESFSFRTAIKESRHLKGSGSWWRFIRDARSPELPV VLLEDLAALCGLVFALAGVGLTLLLDEPLWDGAGTLAIGILLLAVAVIVAMETYGMLVGEAATPQTVEAIRRALSSAPAV TTVIHMRTLHLGPDELLVAAKIGLDPDLTTAQVAAAINEAEALLRDAVPTARRVYLEPDMPRGEVAQPVPPAAAERA >Mature_316_residues STEGGTKAVVAALLANLGIAVAKFVAFLFTRSSSMLAESIHSVADSSNQALLLLGQRNASQPADEEHPFGYGRSRYIAGF LVGIVLFSVGGLFSVYEGVEKLRHPHELESGVVAIVVLAVAIVLESFSFRTAIKESRHLKGSGSWWRFIRDARSPELPVV LLEDLAALCGLVFALAGVGLTLLLDEPLWDGAGTLAIGILLLAVAVIVAMETYGMLVGEAATPQTVEAIRRALSSAPAVT TVIHMRTLHLGPDELLVAAKIGLDPDLTTAQVAAAINEAEALLRDAVPTARRVYLEPDMPRGEVAQPVPPAAAERA
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI57164948, Length=269, Percent_Identity=32.7137546468402, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI115534117, Length=269, Percent_Identity=32.3420074349442, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI24653141, Length=240, Percent_Identity=32.0833333333333, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI24653143, Length=241, Percent_Identity=31.9502074688797, Blast_Score=125, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33459; Mature: 33328
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEGGTKAVVAALLANLGIAVAKFVAFLFTRSSSMLAESIHSVADSSNQALLLLGQRNA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCC SQPADEEHPFGYGRSRYIAGFLVGIVLFSVGGLFSVYEGVEKLRHPHELESGVVAIVVLA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VAIVLESFSFRTAIKESRHLKGSGSWWRFIRDARSPELPVVLLEDLAALCGLVFALAGVG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC LTLLLDEPLWDGAGTLAIGILLLAVAVIVAMETYGMLVGEAATPQTVEAIRRALSSAPAV EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHH TTVIHMRTLHLGPDELLVAAKIGLDPDLTTAQVAAAINEAEALLRDAVPTARRVYLEPDM HHHHHHHHHCCCHHHHEEEHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCC PRGEVAQPVPPAAAERA CCCCCCCCCCCCCCCCC >Mature Secondary Structure STEGGTKAVVAALLANLGIAVAKFVAFLFTRSSSMLAESIHSVADSSNQALLLLGQRNA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCC SQPADEEHPFGYGRSRYIAGFLVGIVLFSVGGLFSVYEGVEKLRHPHELESGVVAIVVLA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VAIVLESFSFRTAIKESRHLKGSGSWWRFIRDARSPELPVVLLEDLAALCGLVFALAGVG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC LTLLLDEPLWDGAGTLAIGILLLAVAVIVAMETYGMLVGEAATPQTVEAIRRALSSAPAV EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHH TTVIHMRTLHLGPDELLVAAKIGLDPDLTTAQVAAAINEAEALLRDAVPTARRVYLEPDM HHHHHHHHHCCCHHHHEEEHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCC PRGEVAQPVPPAAAERA CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA