| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313986
Identifier: 158313986
GI number: 158313986
Start: 2581753
End: 2581992
Strand: Direct
Name: 158313986
Synonym: Franean1_2152
Alternate gene names: NA
Gene position: 2581753-2581992 (Clockwise)
Preceding gene: 158313980
Following gene: 158313996
Centisome position: 28.74
GC content: 56.67
Gene sequence:
>240_bases GTGGCGGCCCGGTCCCAGCCGGCCAGACCGGCATGTCTAAAATCGGCGACATTCAGTCTTGATGATCTTTGGGTTCTGCT CCCGCACTTGACGGATGTGATTGTCGACCCGGTAGAGAGGGGCGGTAACCTTCTGCGGTTGGGCGCCTGCCCGAGGGTGA CTAGATGGCACCTGCCCGTGCTGGAGAACGTCCGTTCACCGAATTATTCTATGTTTGTAAAGCGACATTTACGATCTTGA
Upstream 100 bases:
>100_bases ATGAGACCCATGGAAGTTCCGTCTGGCGCATACAAGTGTGGGCGATCTCGTTGTTCCCTGGGACGGATGCGGCATGTAAT TCGGTTCTAGCGACGATCAC
Downstream 100 bases:
>100_bases TAAGAGGTGTAGCTCGCATGCAAAGGCGAGCCACTGGCACATCTTGAATACGGGGTAGTTGTCCTTATCTGCGGCGATCA GCGTGTACTTGTCGGTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MAARSQPARPACLKSATFSLDDLWVLLPHLTDVIVDPVERGGNLLRLGACPRVTRWHLPVLENVRSPNYSMFVKRHLRS
Sequences:
>Translated_79_residues MAARSQPARPACLKSATFSLDDLWVLLPHLTDVIVDPVERGGNLLRLGACPRVTRWHLPVLENVRSPNYSMFVKRHLRS >Mature_78_residues AARSQPARPACLKSATFSLDDLWVLLPHLTDVIVDPVERGGNLLRLGACPRVTRWHLPVLENVRSPNYSMFVKRHLRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8947; Mature: 8815
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARSQPARPACLKSATFSLDDLWVLLPHLTDVIVDPVERGGNLLRLGACPRVTRWHLPV CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCHH LENVRSPNYSMFVKRHLRS HHCCCCCCHHHHHHHHHCC >Mature Secondary Structure AARSQPARPACLKSATFSLDDLWVLLPHLTDVIVDPVERGGNLLRLGACPRVTRWHLPV CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCHH LENVRSPNYSMFVKRHLRS HHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA