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The map label for this gene is 158313980

Identifier: 158313980

GI number: 158313980

Start: 2576306

End: 2576710

Strand: Direct

Name: 158313980

Synonym: Franean1_2146

Alternate gene names: NA

Gene position: 2576306-2576710 (Clockwise)

Preceding gene: 158313979

Following gene: 158313986

Centisome position: 28.68

GC content: 60.74

Gene sequence:

>405_bases
GTGGCGTACTGCGTGACTCTCGAAGAGGCGGTGCGGGTGCGCGATGCGGTCGCTGCGCGGCTGGCGGAATTCGGGATGGA
GCTACACCCGGACAAGACCCGCATCGTGTACTGCAAGGACGTCGACCGGCGTGGCAACCATGAGGTCACGTCGTTCACGT
TCCTTGGGTACACGTTTCGGCCACGGCTGTCCCGTAATCGGTGGGGGAAGCACTTCGTGAACTTCACCCCCGTGGTCAGC
AGGGAAGCGGTCAGGCGGATGAGTCGGGAGATACATTCTTGGCACATTCCGCGGCGCAGCGACAAGTCGCTTCAGGACCT
GGCGCGCGCGTTCAACCGCATCGTGCAGGGTTGGATCAACTACTTTGGACGCTTCTACAAGTCCATGTTGTATCCGCTCT
TTTAG

Upstream 100 bases:

>100_bases
AGCCACCCTCCGGCCCCACCGTCCGGGTTATCGAATACGAGGTCACCAACCGCGACGGCAGCGGCGTGCGGTCCCGGTCG
AAAGGTATTGCGACGACAGC

Downstream 100 bases:

>100_bases
CAGCTGAACACGAAGCTGGTGCAGTGGGCCACACGGAAATACAGACGGTTGAAACGCCGGGAACGTCGGGCGCGGCAGTG
GTTGCGGCGGATCGCGCGCC

Product: reverse transcriptase

Products: NA

Alternate protein names: Reverse Transcriptase; Maturase; Reverse Transcriptase/Maturase Protein; Retron-Type Reverse Transcriptase C-Terminal Half; Retron-Type Reverse Transcriptase; Reverse Transcriptase Fragment; Reverse Transcriptase/Maturase

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MAYCVTLEEAVRVRDAVAARLAEFGMELHPDKTRIVYCKDVDRRGNHEVTSFTFLGYTFRPRLSRNRWGKHFVNFTPVVS
REAVRRMSREIHSWHIPRRSDKSLQDLARAFNRIVQGWINYFGRFYKSMLYPLF

Sequences:

>Translated_134_residues
MAYCVTLEEAVRVRDAVAARLAEFGMELHPDKTRIVYCKDVDRRGNHEVTSFTFLGYTFRPRLSRNRWGKHFVNFTPVVS
REAVRRMSREIHSWHIPRRSDKSLQDLARAFNRIVQGWINYFGRFYKSMLYPLF
>Mature_133_residues
AYCVTLEEAVRVRDAVAARLAEFGMELHPDKTRIVYCKDVDRRGNHEVTSFTFLGYTFRPRLSRNRWGKHFVNFTPVVSR
EAVRRMSREIHSWHIPRRSDKSLQDLARAFNRIVQGWINYFGRFYKSMLYPLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16019; Mature: 15887

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYCVTLEEAVRVRDAVAARLAEFGMELHPDKTRIVYCKDVDRRGNHEVTSFTFLGYTFR
CCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECEEEC
PRLSRNRWGKHFVNFTPVVSREAVRRMSREIHSWHIPRRSDKSLQDLARAFNRIVQGWIN
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
YFGRFYKSMLYPLF
HHHHHHHHHHCCCC
>Mature Secondary Structure 
AYCVTLEEAVRVRDAVAARLAEFGMELHPDKTRIVYCKDVDRRGNHEVTSFTFLGYTFR
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECEEEC
PRLSRNRWGKHFVNFTPVVSREAVRRMSREIHSWHIPRRSDKSLQDLARAFNRIVQGWIN
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
YFGRFYKSMLYPLF
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA