BacMap

Definition	Frankia sp. EAN1pec chromosome, complete genome.
Accession	NC_009921
Length	8,982,042

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The map label for this gene is dnaJ2 [H]

Identifier: 158313944

GI number: 158313944

Start: 2536561

End: 2537703

Strand: Direct

Name: dnaJ2 [H]

Synonym: Franean1_2110

Alternate gene names: 158313944

Gene position: 2536561-2537703 (Clockwise)

Preceding gene: 158313943

Following gene: 158313945

Centisome position: 28.24

GC content: 72.88

Gene sequence:

>1143_bases
ATGGCAGTGGATTATTACGCGACGCTCGGTGTGCGGCGTGACGCCACCGGTGACGAGATCAAGCGGGCCTACCGCAAGCT
GGCCCGGGAGCTGCATCCGGACGTCAATCCGGACCCGGAGGCGCAGCAGCGGTTCAGGAACGTGACGAACGCCTACGAGG
TCCTCTCGGACCCCGAGAAGCGGCAGATCGTCGACCTCGGTGGTGACCCGCTCGCGCCCGGTGGTGGCGCGGCCGGCGCC
GGTTCGCCGTTCGGCGCCGGTTTCGGCGGCCTCGGCGACATCATGGACGCCTTCTTCGGCGGTGGTGCCAGCCGCGGCCC
GCGCTCGAGGGTGCGCCGTGGGAACGACGCGCTGCTGCGGCTCGAGCTCGACCTGGCCGAGACCGCGTTCGGTGCCACCC
GGGACATCACCGTCGACACGGCCGTGGTGTGCGCGACCTGTACCGGCGCGGGCGCCGCGCCCGGCACGCAGCCGTCGACC
TGCTCGACCTGCCACGGCCGCGGCGAGGTCCAGCAGGTGACCCGCTCGTTCCTCGGCCAGATGGTGACCTCACGGCCCTG
CCCGCGCTGCTCCGGCACCGGAACGGTCATCGAGCATCCCTGCCGGGACTGCTCCGGTGACGGCCGCGTCCGCAAGCGCC
GGACCCTGACGGTGAAGATTCCCTCGGGCGTCGAGGACGGCATGCGCATCCGGCTGTCCGGCGAGGGCGAGGTCGGCCCC
GGCGGCGGGCCGCCCGGCGACCTGTACGTCGAGGTCTCCGAGCGTCAGCACGCGGTCTTCAGCCGGGAGGGCGACGACCT
CCACTGCGACCTTCGCCTGCCGATGACCGCCGCGGCCCTGGGCACGATGGCGACGCTGGAGACCCTCGACGGCTCCGAGA
CGATCACGGTGAAGCCGGGCACCCAGCCCGGCGAGGTGCTCAGGCTCGCCGGGCGCGGTGTTCCGCACCTGCGCGCGGTG
GGGCGCGGGCACCTGCACATCCACATCGTCGTCGAGACGCCGACGAAGCTCGACGCCGAGCAGGAACGCCTCCTACGGGA
GCTGGCGAAGCTGCGTGAGGAGGAGACGCCGGCGGTGGTCGGCGGATCCTCCAGCGGGTCCGGCCTGTTCTCCCGGCGCC
GTGGCGGTCGGCGCAACCGCTGA

Upstream 100 bases:

>100_bases
GAATGGGAGTCGTCGGCCCGATGCGGATGGACTATCCGGGAACGATGGCGGCCGTACGAGCCGTCGCCAAGTACGTGGGT
GAACTCTTGGGTGCCGACTG

Downstream 100 bases:

>100_bases
CCGCGCCCGTCTTCCACCTGGATCCGCTGCCGTCGGTCGACGTCTTCGTGCTGGGCGGCCCCGAGGGCCGGCACGCCGCG
ACGGTGCGCCGGCTGCGGGT

Product: chaperone protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MAVDYYATLGVRRDATGDEIKRAYRKLARELHPDVNPDPEAQQRFRNVTNAYEVLSDPEKRQIVDLGGDPLAPGGGAAGA
GSPFGAGFGGLGDIMDAFFGGGASRGPRSRVRRGNDALLRLELDLAETAFGATRDITVDTAVVCATCTGAGAAPGTQPST
CSTCHGRGEVQQVTRSFLGQMVTSRPCPRCSGTGTVIEHPCRDCSGDGRVRKRRTLTVKIPSGVEDGMRIRLSGEGEVGP
GGGPPGDLYVEVSERQHAVFSREGDDLHCDLRLPMTAAALGTMATLETLDGSETITVKPGTQPGEVLRLAGRGVPHLRAV
GRGHLHIHIVVETPTKLDAEQERLLRELAKLREEETPAVVGGSSSGSGLFSRRRGGRRNR

Sequences:

>Translated_380_residues
MAVDYYATLGVRRDATGDEIKRAYRKLARELHPDVNPDPEAQQRFRNVTNAYEVLSDPEKRQIVDLGGDPLAPGGGAAGA
GSPFGAGFGGLGDIMDAFFGGGASRGPRSRVRRGNDALLRLELDLAETAFGATRDITVDTAVVCATCTGAGAAPGTQPST
CSTCHGRGEVQQVTRSFLGQMVTSRPCPRCSGTGTVIEHPCRDCSGDGRVRKRRTLTVKIPSGVEDGMRIRLSGEGEVGP
GGGPPGDLYVEVSERQHAVFSREGDDLHCDLRLPMTAAALGTMATLETLDGSETITVKPGTQPGEVLRLAGRGVPHLRAV
GRGHLHIHIVVETPTKLDAEQERLLRELAKLREEETPAVVGGSSSGSGLFSRRRGGRRNR
>Mature_379_residues
AVDYYATLGVRRDATGDEIKRAYRKLARELHPDVNPDPEAQQRFRNVTNAYEVLSDPEKRQIVDLGGDPLAPGGGAAGAG
SPFGAGFGGLGDIMDAFFGGGASRGPRSRVRRGNDALLRLELDLAETAFGATRDITVDTAVVCATCTGAGAAPGTQPSTC
STCHGRGEVQQVTRSFLGQMVTSRPCPRCSGTGTVIEHPCRDCSGDGRVRKRRTLTVKIPSGVEDGMRIRLSGEGEVGPG
GGPPGDLYVEVSERQHAVFSREGDDLHCDLRLPMTAAALGTMATLETLDGSETITVKPGTQPGEVLRLAGRGVPHLRAVG
RGHLHIHIVVETPTKLDAEQERLLRELAKLREEETPAVVGGSSSGSGLFSRRRGGRRNR

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360838, Length=365, Percent_Identity=33.6986301369863, Blast_Score=192, Evalue=3e-49,
Organism=Homo sapiens, GI205360840, Length=365, Percent_Identity=33.6986301369863, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI194328758, Length=349, Percent_Identity=34.6704871060172, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI194328760, Length=349, Percent_Identity=34.6704871060172, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI4504511, Length=362, Percent_Identity=35.0828729281768, Blast_Score=181, Evalue=8e-46,
Organism=Homo sapiens, GI5031741, Length=373, Percent_Identity=32.171581769437, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI194328762, Length=310, Percent_Identity=32.5806451612903, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI7706495, Length=347, Percent_Identity=32.8530259365994, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI5453690, Length=357, Percent_Identity=26.6106442577031, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI23503241, Length=104, Percent_Identity=49.0384615384615, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI6631085, Length=182, Percent_Identity=30.2197802197802, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI47777312, Length=105, Percent_Identity=47.6190476190476, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI4885495, Length=105, Percent_Identity=47.6190476190476, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI9558755, Length=111, Percent_Identity=38.7387387387387, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI17388799, Length=105, Percent_Identity=47.6190476190476, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI27151736, Length=107, Percent_Identity=42.9906542056075, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI88501736, Length=107, Percent_Identity=42.9906542056075, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI201862587, Length=69, Percent_Identity=49.2753623188406, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI201862518, Length=69, Percent_Identity=49.2753623188406, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI56549115, Length=69, Percent_Identity=49.2753623188406, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI39204547, Length=170, Percent_Identity=32.9411764705882, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI194306642, Length=102, Percent_Identity=41.1764705882353, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI194306640, Length=102, Percent_Identity=41.1764705882353, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI72534740, Length=106, Percent_Identity=40.5660377358491, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI21553335, Length=100, Percent_Identity=42, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI56687498, Length=70, Percent_Identity=51.4285714285714, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI45504382, Length=64, Percent_Identity=50, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI22749377, Length=102, Percent_Identity=41.1764705882353, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI217035105, Length=69, Percent_Identity=50.7246376811594, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI68077168, Length=73, Percent_Identity=49.3150684931507, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI68077166, Length=73, Percent_Identity=49.3150684931507, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI5453980, Length=92, Percent_Identity=42.3913043478261, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI21361912, Length=65, Percent_Identity=46.1538461538462, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1786197, Length=347, Percent_Identity=45.2449567723343, Blast_Score=276, Evalue=1e-75,
Organism=Escherichia coli, GI1787235, Length=350, Percent_Identity=31.1428571428571, Blast_Score=135, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17553096, Length=353, Percent_Identity=32.5779036827195, Blast_Score=181, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17553098, Length=353, Percent_Identity=32.5779036827195, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17507263, Length=363, Percent_Identity=34.435261707989, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI212645553, Length=354, Percent_Identity=31.638418079096, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17563890, Length=240, Percent_Identity=28.75, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17534355, Length=128, Percent_Identity=36.71875, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17554644, Length=98, Percent_Identity=46.9387755102041, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17538236, Length=123, Percent_Identity=37.3983739837398, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17554874, Length=74, Percent_Identity=45.945945945946, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17551190, Length=74, Percent_Identity=48.6486486486487, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17568643, Length=66, Percent_Identity=48.4848484848485, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17510335, Length=72, Percent_Identity=48.6111111111111, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=367, Percent_Identity=36.2397820163488, Blast_Score=178, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6323870, Length=361, Percent_Identity=35.1800554016621, Blast_Score=155, Evalue=8e-39,
Organism=Saccharomyces cerevisiae, GI6321094, Length=424, Percent_Identity=30.188679245283, Blast_Score=149, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6323119, Length=379, Percent_Identity=30.0791556728232, Blast_Score=136, Evalue=6e-33,
Organism=Saccharomyces cerevisiae, GI6324252, Length=425, Percent_Identity=24.9411764705882, Blast_Score=97, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6323813, Length=117, Percent_Identity=45.2991452991453, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320888, Length=91, Percent_Identity=47.2527472527472, Blast_Score=77, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6322194, Length=102, Percent_Identity=45.0980392156863, Blast_Score=73, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6324103, Length=67, Percent_Identity=50.7462686567164, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45549272, Length=386, Percent_Identity=32.9015544041451, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI45552813, Length=386, Percent_Identity=32.9015544041451, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI45552811, Length=386, Percent_Identity=32.9015544041451, Blast_Score=181, Evalue=6e-46,
Organism=Drosophila melanogaster, GI24646562, Length=351, Percent_Identity=35.8974358974359, Blast_Score=174, Evalue=6e-44,
Organism=Drosophila melanogaster, GI24646560, Length=351, Percent_Identity=35.8974358974359, Blast_Score=174, Evalue=6e-44,
Organism=Drosophila melanogaster, GI24646558, Length=351, Percent_Identity=35.8974358974359, Blast_Score=174, Evalue=6e-44,
Organism=Drosophila melanogaster, GI24646556, Length=351, Percent_Identity=35.8974358974359, Blast_Score=174, Evalue=6e-44,
Organism=Drosophila melanogaster, GI21357547, Length=351, Percent_Identity=35.8974358974359, Blast_Score=174, Evalue=6e-44,
Organism=Drosophila melanogaster, GI20129487, Length=344, Percent_Identity=32.8488372093023, Blast_Score=147, Evalue=8e-36,
Organism=Drosophila melanogaster, GI24584014, Length=344, Percent_Identity=32.8488372093023, Blast_Score=147, Evalue=8e-36,
Organism=Drosophila melanogaster, GI19920464, Length=349, Percent_Identity=31.8051575931232, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI85726398, Length=369, Percent_Identity=29.5392953929539, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24658562, Length=378, Percent_Identity=27.5132275132275, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24658555, Length=378, Percent_Identity=27.5132275132275, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI28574949, Length=351, Percent_Identity=26.7806267806268, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI18858081, Length=353, Percent_Identity=28.8951841359773, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24654066, Length=68, Percent_Identity=58.8235294117647, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24654070, Length=68, Percent_Identity=58.8235294117647, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24654068, Length=68, Percent_Identity=58.8235294117647, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24654072, Length=68, Percent_Identity=58.8235294117647, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI161077138, Length=65, Percent_Identity=60, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=46.3768115942029, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355911, Length=100, Percent_Identity=43, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21358273, Length=65, Percent_Identity=53.8461538461538, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24643180, Length=62, Percent_Identity=46.7741935483871, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 40281; Mature: 40150

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDYYATLGVRRDATGDEIKRAYRKLARELHPDVNPDPEAQQRFRNVTNAYEVLSDPEK
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCH
RQIVDLGGDPLAPGGGAAGAGSPFGAGFGGLGDIMDAFFGGGASRGPRSRVRRGNDALLR
HEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCEEEE
LELDLAETAFGATRDITVDTAVVCATCTGAGAAPGTQPSTCSTCHGRGEVQQVTRSFLGQ
EEEEHHHHHCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
MVTSRPCPRCSGTGTVIEHPCRDCSGDGRVRKRRTLTVKIPSGVEDGMRIRLSGEGEVGP
HHHCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCCCC
GGGPPGDLYVEVSERQHAVFSREGDDLHCDLRLPMTAAALGTMATLETLDGSETITVKPG
CCCCCCCEEEEECCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCC
TQPGEVLRLAGRGVPHLRAVGRGHLHIHIVVETPTKLDAEQERLLRELAKLREEETPAVV
CCHHHHHHHHCCCCHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEE
GGSSSGSGLFSRRRGGRRNR
ECCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
AVDYYATLGVRRDATGDEIKRAYRKLARELHPDVNPDPEAQQRFRNVTNAYEVLSDPEK
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCH
RQIVDLGGDPLAPGGGAAGAGSPFGAGFGGLGDIMDAFFGGGASRGPRSRVRRGNDALLR
HEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCEEEE
LELDLAETAFGATRDITVDTAVVCATCTGAGAAPGTQPSTCSTCHGRGEVQQVTRSFLGQ
EEEEHHHHHCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
MVTSRPCPRCSGTGTVIEHPCRDCSGDGRVRKRRTLTVKIPSGVEDGMRIRLSGEGEVGP
HHHCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCCCC
GGGPPGDLYVEVSERQHAVFSREGDDLHCDLRLPMTAAALGTMATLETLDGSETITVKPG
CCCCCCCEEEEECCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCC
TQPGEVLRLAGRGVPHLRAVGRGHLHIHIVVETPTKLDAEQERLLRELAKLREEETPAVV
CCHHHHHHHHCCCCHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEE
GGSSSGSGLFSRRRGGRRNR
ECCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9748446 [H]