| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313933
Identifier: 158313933
GI number: 158313933
Start: 2523647
End: 2524591
Strand: Direct
Name: 158313933
Synonym: Franean1_2099
Alternate gene names: NA
Gene position: 2523647-2524591 (Clockwise)
Preceding gene: 158313932
Following gene: 158313934
Centisome position: 28.1
GC content: 73.33
Gene sequence:
>945_bases GTGTTGAGCCGCATCGCGGAGTCGCTGTTCTGGATCGGCCGCTACGCGGAGCGGGCCGAGTGCACCGCGCGCATCCTGGA CGTCCACGTCCATCGGGTGCTCGAGGACCCGTGGCTGGACGAGACGTCGGCCGGGGCCGAGCTGCTCGCCGTGATGGGCG TCGCCGACCGGTCCGGCCCCGCCGACTCCCGGCATGTCACCGAGGTGCTCGCCTACGAGGCCGCGAACGCCTCCAGCATC CGCGGGTCGCTCTCCGCGGCGCGGGAGAACGCCCGCGGTGCCCGTGTCGTGGTCTCCAGTGACGTGTGGGAGTGCCTGAA CGTGACCTGGAACGACCTGCCGCACACCGAGGAGCTCGCCCGCCGGATGGGTCCGCACGTGTACTTCCGCTACGTGCGGG AACGCACGGCGATGCTGGCCGGACTGGTCGACGCCACCCTCGCGCGCGACGACGGCTGGCGCTTCCTGGTGCTCGGGCGC AGCCTGGAGCGGGTCGACATGACCGCCCGGCTGCTGTCGTCGAGCATCAGCGACGACCCGAGCTCGCAGAGCTGGGTCAG CCTGCTGCGCTCGTGCGGCGCGCACGAGGCCTACCTGCGCACCTACCGGCGGGCGGTGGACGCGGCCCGGGTCGCGGAGT TCCTGCTGCTGGACCGGCTCTTCCCGCGGTCGATCTACTGGTCGCTGGCGCTCGCGGAGCAGATCCTCGCCGAGCTGGAC ACCAGCCGCGGCCTGGTCCGGGCGACCGTGGACGACGCCGCCCGGCGCACCGTCGGGCGGGCCCGCACCGAGCTGGAGTT CCGCAGCATCGACGAGCTCGTCGCCGAGATGCCCGACCTGCTGGCCGCCCTGCAACGGACCTGCTCGGCGGTCAGCGCGG CCGTCACCACCCGGTACTTCGCCCGGGACAGCCCGCGCACCTGGGCGAGCGAGGTGCCCGCCTGA
Upstream 100 bases:
>100_bases TCGCCGCCGGGCCCGACCTCGGCCCGCACTCGTCCGACGAGCAGCAGCAACAGCAGTCCGAGCAGCAGAACCAGCAGCAG AACCAGCAGGGGGACGGGCT
Downstream 100 bases:
>100_bases CGAGGGGCGGAGAACAGCAACGGGCGACAGCTGCGCGCAGCGCCGCACACAAGGGAGACAGGCGACGATGAGCTGGCAGA TCCGGATCGAGCACTCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MLSRIAESLFWIGRYAERAECTARILDVHVHRVLEDPWLDETSAGAELLAVMGVADRSGPADSRHVTEVLAYEAANASSI RGSLSAARENARGARVVVSSDVWECLNVTWNDLPHTEELARRMGPHVYFRYVRERTAMLAGLVDATLARDDGWRFLVLGR SLERVDMTARLLSSSISDDPSSQSWVSLLRSCGAHEAYLRTYRRAVDAARVAEFLLLDRLFPRSIYWSLALAEQILAELD TSRGLVRATVDDAARRTVGRARTELEFRSIDELVAEMPDLLAALQRTCSAVSAAVTTRYFARDSPRTWASEVPA
Sequences:
>Translated_314_residues MLSRIAESLFWIGRYAERAECTARILDVHVHRVLEDPWLDETSAGAELLAVMGVADRSGPADSRHVTEVLAYEAANASSI RGSLSAARENARGARVVVSSDVWECLNVTWNDLPHTEELARRMGPHVYFRYVRERTAMLAGLVDATLARDDGWRFLVLGR SLERVDMTARLLSSSISDDPSSQSWVSLLRSCGAHEAYLRTYRRAVDAARVAEFLLLDRLFPRSIYWSLALAEQILAELD TSRGLVRATVDDAARRTVGRARTELEFRSIDELVAEMPDLLAALQRTCSAVSAAVTTRYFARDSPRTWASEVPA >Mature_314_residues MLSRIAESLFWIGRYAERAECTARILDVHVHRVLEDPWLDETSAGAELLAVMGVADRSGPADSRHVTEVLAYEAANASSI RGSLSAARENARGARVVVSSDVWECLNVTWNDLPHTEELARRMGPHVYFRYVRERTAMLAGLVDATLARDDGWRFLVLGR SLERVDMTARLLSSSISDDPSSQSWVSLLRSCGAHEAYLRTYRRAVDAARVAEFLLLDRLFPRSIYWSLALAEQILAELD TSRGLVRATVDDAARRTVGRARTELEFRSIDELVAEMPDLLAALQRTCSAVSAAVTTRYFARDSPRTWASEVPA
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007296 - InterPro: IPR007297 - InterPro: IPR007302 [H]
Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 35012; Mature: 35012
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRIAESLFWIGRYAERAECTARILDVHVHRVLEDPWLDETSAGAELLAVMGVADRSGP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC ADSRHVTEVLAYEAANASSIRGSLSAARENARGARVVVSSDVWECLNVTWNDLPHTEELA CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCCCCCHHHHH RRMGPHVYFRYVRERTAMLAGLVDATLARDDGWRFLVLGRSLERVDMTARLLSSSISDDP HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC SSQSWVSLLRSCGAHEAYLRTYRRAVDAARVAEFLLLDRLFPRSIYWSLALAEQILAELD CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSRGLVRATVDDAARRTVGRARTELEFRSIDELVAEMPDLLAALQRTCSAVSAAVTTRYF HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARDSPRTWASEVPA HCCCCCCCHHCCCC >Mature Secondary Structure MLSRIAESLFWIGRYAERAECTARILDVHVHRVLEDPWLDETSAGAELLAVMGVADRSGP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC ADSRHVTEVLAYEAANASSIRGSLSAARENARGARVVVSSDVWECLNVTWNDLPHTEELA CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCCCCCHHHHH RRMGPHVYFRYVRERTAMLAGLVDATLARDDGWRFLVLGRSLERVDMTARLLSSSISDDP HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC SSQSWVSLLRSCGAHEAYLRTYRRAVDAARVAEFLLLDRLFPRSIYWSLALAEQILAELD CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSRGLVRATVDDAARRTVGRARTELEFRSIDELVAEMPDLLAALQRTCSAVSAAVTTRYF HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARDSPRTWASEVPA HCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]