| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313932
Identifier: 158313932
GI number: 158313932
Start: 2522073
End: 2523653
Strand: Direct
Name: 158313932
Synonym: Franean1_2098
Alternate gene names: NA
Gene position: 2522073-2523653 (Clockwise)
Preceding gene: 158313928
Following gene: 158313933
Centisome position: 28.08
GC content: 72.3
Gene sequence:
>1581_bases GTGGAGGTCGCGGCAGCGGCCGCCTGGGACGAGGTCTTCGACGCGGCGCATCGCCCCCGGGAGGTGTACACCGCCCTGCA CGACGCGCTGCAGCCGCTGAGCAGCTCCGACCTCGCGGCCCGCAAGATCGCGCTCGACCGTGCCTTCCGGGACGCCGGCA TCACCTTCAACCTGTTCGGCGAGGAGCGGCCGTTCCCGCTGGACCTGGTGCCCAGGCTGCTCTCCTGCGACGAGTGGGAC GTCATCGAGCGGGGCGTGACCCAGCGGGTGCGCGCGCTCGAGGCGTTTCTCGACGACGTCTACGGGCGTGCCGACGTCCT CGCGGACGGCATCGTGCCCCGCCGGCTGGTGCTGTCCAGCTCGCACTTCCACCGTGCGGCGCACGGCATCGACCCGCCGA ACGGCGTCCGCGCGCATGTCAGCGGCATCGACCTGGTGCGGGACGAGCGCGGCGACTTCCGGGTGCTCGAGGACAACGTC CGCGTCCCGTCCGGGGTCAGCTACGTCATCGAGAACCGGCGCGCGATGACCCGGGTGTTCCCGGAGCTGTTCTCCACCCA CCGGGTGCGCCCGGTCGCCGACTACGCCACCCACCTGCTGCACGCGCTGCGCGCGGCGGCGCCACCGGAGGTCGCCGACC CGACCGTCGTGGTGCTCACCCCGGGCGTGTACAACTCCGCCTACTTCGAGCATGCGCTGCTGGCCCGCCAGATGGGCGTG GAGCTGGTCGAGGGCCGGGATCTCTCCGTCCGGAACAACCGGGTCACGATGCGCACCACCGAGGGTGACCAGCCGGTGCA CGTTGTCTACCGCCGGGTCGACGACGACTGGCTCGACCCGCTGCACTTCCGTCCCGAGTCGATGGTCGGCTGCGCGGGGC TGCTCAACGCGGCCCGGGCTGGGAACGTGACGATCGCGAACGCGGTCGGCAACGGGGTCGCCGACGACAAGCTGATGTAC ACCTACGTCCCGGACCTCATCCGTTACTACCTCGGTGAGGAGCCGGCGCTCGGCAACGTCGACACCTTCCGGCTGGAGGA CCCGGACCAGCGCGCCCATGTGCTGGACAACCTCGAGTCCCTGGTGGTCAAGCCGGTGGACGGCTCCGGCGGCAAGGGGA TCGTGATCGGCCCGCAGGCGACCGAGGCCGAGCTGGTCGCGCTGCGCGCGCGGGTGCTCGCCGACCCGCGCGGGTGGATC GCACAGCGGGTGGTGAAGCTGTCGACCTCCCCGACCCTGGCCGATGACCGCCTCGGGCCGCGCCACGTCGACCTGCGGCC GTTCGCGGTGAACGACGGGAACCGGATCTGGGTGCTGCCCGGCGGGCTGACCCGGGTCGCGCTGCCCCGCGGCAGCCTGG TCGTGAACTCCAGCCAGGGCGGCGGTTCGAAGGACACCTGGGTGCTCGCCCCCGAGCGGGTCGGTCCGGAGGGGGCCGCG CTTCTGCGTCGGCGGCCGGGCCTGACGCCGTCGGTCGCCGCCGGGCCCGACCTCGGCCCGCACTCGTCCGACGAGCAGCA GCAACAGCAGTCCGAGCAGCAGAACCAGCAGCAGAACCAGCAGGGGGACGGGCTGTGTTGA
Upstream 100 bases:
>100_bases CGGCGCGGACCGGGGGCAGGGGCGCGGTCACGACGACATTCGCAGGTAACACGGAGCACCTACGCTCCTCCGCGTGGCGG ACCTTTTCGAGGGGTATCCG
Downstream 100 bases:
>100_bases GCCGCATCGCGGAGTCGCTGTTCTGGATCGGCCGCTACGCGGAGCGGGCCGAGTGCACCGCGCGCATCCTGGACGTCCAC GTCCATCGGGTGCTCGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MEVAAAAAWDEVFDAAHRPREVYTALHDALQPLSSSDLAARKIALDRAFRDAGITFNLFGEERPFPLDLVPRLLSCDEWD VIERGVTQRVRALEAFLDDVYGRADVLADGIVPRRLVLSSSHFHRAAHGIDPPNGVRAHVSGIDLVRDERGDFRVLEDNV RVPSGVSYVIENRRAMTRVFPELFSTHRVRPVADYATHLLHALRAAAPPEVADPTVVVLTPGVYNSAYFEHALLARQMGV ELVEGRDLSVRNNRVTMRTTEGDQPVHVVYRRVDDDWLDPLHFRPESMVGCAGLLNAARAGNVTIANAVGNGVADDKLMY TYVPDLIRYYLGEEPALGNVDTFRLEDPDQRAHVLDNLESLVVKPVDGSGGKGIVIGPQATEAELVALRARVLADPRGWI AQRVVKLSTSPTLADDRLGPRHVDLRPFAVNDGNRIWVLPGGLTRVALPRGSLVVNSSQGGGSKDTWVLAPERVGPEGAA LLRRRPGLTPSVAAGPDLGPHSSDEQQQQQSEQQNQQQNQQGDGLC
Sequences:
>Translated_526_residues MEVAAAAAWDEVFDAAHRPREVYTALHDALQPLSSSDLAARKIALDRAFRDAGITFNLFGEERPFPLDLVPRLLSCDEWD VIERGVTQRVRALEAFLDDVYGRADVLADGIVPRRLVLSSSHFHRAAHGIDPPNGVRAHVSGIDLVRDERGDFRVLEDNV RVPSGVSYVIENRRAMTRVFPELFSTHRVRPVADYATHLLHALRAAAPPEVADPTVVVLTPGVYNSAYFEHALLARQMGV ELVEGRDLSVRNNRVTMRTTEGDQPVHVVYRRVDDDWLDPLHFRPESMVGCAGLLNAARAGNVTIANAVGNGVADDKLMY TYVPDLIRYYLGEEPALGNVDTFRLEDPDQRAHVLDNLESLVVKPVDGSGGKGIVIGPQATEAELVALRARVLADPRGWI AQRVVKLSTSPTLADDRLGPRHVDLRPFAVNDGNRIWVLPGGLTRVALPRGSLVVNSSQGGGSKDTWVLAPERVGPEGAA LLRRRPGLTPSVAAGPDLGPHSSDEQQQQQSEQQNQQQNQQGDGLC >Mature_526_residues MEVAAAAAWDEVFDAAHRPREVYTALHDALQPLSSSDLAARKIALDRAFRDAGITFNLFGEERPFPLDLVPRLLSCDEWD VIERGVTQRVRALEAFLDDVYGRADVLADGIVPRRLVLSSSHFHRAAHGIDPPNGVRAHVSGIDLVRDERGDFRVLEDNV RVPSGVSYVIENRRAMTRVFPELFSTHRVRPVADYATHLLHALRAAAPPEVADPTVVVLTPGVYNSAYFEHALLARQMGV ELVEGRDLSVRNNRVTMRTTEGDQPVHVVYRRVDDDWLDPLHFRPESMVGCAGLLNAARAGNVTIANAVGNGVADDKLMY TYVPDLIRYYLGEEPALGNVDTFRLEDPDQRAHVLDNLESLVVKPVDGSGGKGIVIGPQATEAELVALRARVLADPRGWI AQRVVKLSTSPTLADDRLGPRHVDLRPFAVNDGNRIWVLPGGLTRVALPRGSLVVNSSQGGGSKDTWVLAPERVGPEGAA LLRRRPGLTPSVAAGPDLGPHSSDEQQQQQSEQQNQQQNQQGDGLC
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To Synechocystis PCC 6803 sll0335 and to M.tuberculosis Rv2567 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 57595; Mature: 57595
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVAAAAAWDEVFDAAHRPREVYTALHDALQPLSSSDLAARKIALDRAFRDAGITFNLFG CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECC EERPFPLDLVPRLLSCDEWDVIERGVTQRVRALEAFLDDVYGRADVLADGIVPRRLVLSS CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHCC SHFHRAAHGIDPPNGVRAHVSGIDLVRDERGDFRVLEDNVRVPSGVSYVIENRRAMTRVF CHHHHHHCCCCCCCCCEEEECCCHHEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH PELFSTHRVRPVADYATHLLHALRAAAPPEVADPTVVVLTPGVYNSAYFEHALLARQMGV HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC ELVEGRDLSVRNNRVTMRTTEGDQPVHVVYRRVDDDWLDPLHFRPESMVGCAGLLNAARA EEECCCCCEEECCEEEEEECCCCCCCEEHEECCCCCCCCCCCCCCHHHHHHHHHHHHHCC GNVTIANAVGNGVADDKLMYTYVPDLIRYYLGEEPALGNVDTFRLEDPDQRAHVLDNLES CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHH LVVKPVDGSGGKGIVIGPQATEAELVALRARVLADPRGWIAQRVVKLSTSPTLADDRLGP HEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC RHVDLRPFAVNDGNRIWVLPGGLTRVALPRGSLVVNSSQGGGSKDTWVLAPERVGPEGAA CCCCEEEEEECCCCEEEEECCCCEEEEECCCCEEEECCCCCCCCCEEEECCHHCCCCHHH LLRRRPGLTPSVAAGPDLGPHSSDEQQQQQSEQQNQQQNQQGDGLC HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEVAAAAAWDEVFDAAHRPREVYTALHDALQPLSSSDLAARKIALDRAFRDAGITFNLFG CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECC EERPFPLDLVPRLLSCDEWDVIERGVTQRVRALEAFLDDVYGRADVLADGIVPRRLVLSS CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHCC SHFHRAAHGIDPPNGVRAHVSGIDLVRDERGDFRVLEDNVRVPSGVSYVIENRRAMTRVF CHHHHHHCCCCCCCCCEEEECCCHHEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH PELFSTHRVRPVADYATHLLHALRAAAPPEVADPTVVVLTPGVYNSAYFEHALLARQMGV HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC ELVEGRDLSVRNNRVTMRTTEGDQPVHVVYRRVDDDWLDPLHFRPESMVGCAGLLNAARA EEECCCCCEEECCEEEEEECCCCCCCEEHEECCCCCCCCCCCCCCHHHHHHHHHHHHHCC GNVTIANAVGNGVADDKLMYTYVPDLIRYYLGEEPALGNVDTFRLEDPDQRAHVLDNLES CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHH LVVKPVDGSGGKGIVIGPQATEAELVALRARVLADPRGWIAQRVVKLSTSPTLADDRLGP HEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC RHVDLRPFAVNDGNRIWVLPGGLTRVALPRGSLVVNSSQGGGSKDTWVLAPERVGPEGAA CCCCEEEEEECCCCEEEEECCCCEEEEECCCCEEEECCCCCCCCCEEEECCHHCCCCHHH LLRRRPGLTPSVAAGPDLGPHSSDEQQQQQSEQQNQQQNQQGDGLC HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]