Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313934

Identifier: 158313934

GI number: 158313934

Start: 2524659

End: 2525504

Strand: Direct

Name: 158313934

Synonym: Franean1_2100

Alternate gene names: NA

Gene position: 2524659-2525504 (Clockwise)

Preceding gene: 158313933

Following gene: 158313936

Centisome position: 28.11

GC content: 72.1

Gene sequence:

>846_bases
ATGAGCTGGCAGATCCGGATCGAGCACTCGACGGGCTACCGGTACGCCAGCCCGGTGATCTCCTCGTACAACGAGGCCCG
GATCATCCCCCAGACCGGGGACCGGCAGCTCACACTCGAGGCTACCGTCCGCACCGAGCCGTCCTCGTCCACCTACCGCT
ACTGGGACTACTGGGGGACCCAGGTCACCGCGTTCGACCTGCACACCCCGCACACCGAGCTGATCGTCACCGGGCGCTCG
GTCGTGCAGACGGCGCCCGCGCCGGCGCGGCCCACCGACGTCCCCGGCTGGGACGGCCTCACCGATGACCGCGTCTCGGA
CCGGTTCGTCGAGTTCGTCCGGCCCACCGTCTCGACACCGGAGCACCCGGAGCTGCTGGCCGCCGCCCGCGAGCTCGCCG
CCGCCAACACCCCCGCGGACTTCCTGCCCGCGGTCGGTGACTGGGTGCGGGAGAAGCTGCGCTACCAGCCTGGCACGACC
GAGGTGCGCACCTCGGCCGTCGAGGCGTGGCAGCAGGGGGTGGGCGTGTGCCAGGACTTCGCCCACCTGGCGCTCGTCCT
GATGCGCGCCGCCGGCATGCCGGCCCGCTACGTGTCGGGCTATCAGCACCCGTCGGCGGACGCCGCGGTGGGCGAGACCG
TCAGCGGGCAGAGCCATGCCTGGGTCGAGGGCTGGCTGGGTGAGTGGTGGGGCTTCGACCCGACCAACGGCGTGCCCGCG
GGCGAGCAGCATGTAGTGGTCGCCCGCGGGCGGGACTACAACGACGTCCCACCGATGTTCGGCGTGTACTCCGGTGGTGC
CTCGACGTCCCTGGGCGTGACCGTCTCGGTGACCCGCCTGGGCTGA

Upstream 100 bases:

>100_bases
CCGCGCACCTGGGCGAGCGAGGTGCCCGCCTGACGAGGGGCGGAGAACAGCAACGGGCGACAGCTGCGCGCAGCGCCGCA
CACAAGGGAGACAGGCGACG

Downstream 100 bases:

>100_bases
GCGGCGCTGGTGAGCCGGGCGGTCGGGAGGACCTGGGCGGTCAGGAGGACTTGATGGCCGAGACGTCCAGCTCGATCTTG
ACCTTGTCGCTGATGAGCAC

Product: transglutaminase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSWQIRIEHSTGYRYASPVISSYNEARIIPQTGDRQLTLEATVRTEPSSSTYRYWDYWGTQVTAFDLHTPHTELIVTGRS
VVQTAPAPARPTDVPGWDGLTDDRVSDRFVEFVRPTVSTPEHPELLAAARELAAANTPADFLPAVGDWVREKLRYQPGTT
EVRTSAVEAWQQGVGVCQDFAHLALVLMRAAGMPARYVSGYQHPSADAAVGETVSGQSHAWVEGWLGEWWGFDPTNGVPA
GEQHVVVARGRDYNDVPPMFGVYSGGASTSLGVTVSVTRLG

Sequences:

>Translated_281_residues
MSWQIRIEHSTGYRYASPVISSYNEARIIPQTGDRQLTLEATVRTEPSSSTYRYWDYWGTQVTAFDLHTPHTELIVTGRS
VVQTAPAPARPTDVPGWDGLTDDRVSDRFVEFVRPTVSTPEHPELLAAARELAAANTPADFLPAVGDWVREKLRYQPGTT
EVRTSAVEAWQQGVGVCQDFAHLALVLMRAAGMPARYVSGYQHPSADAAVGETVSGQSHAWVEGWLGEWWGFDPTNGVPA
GEQHVVVARGRDYNDVPPMFGVYSGGASTSLGVTVSVTRLG
>Mature_280_residues
SWQIRIEHSTGYRYASPVISSYNEARIIPQTGDRQLTLEATVRTEPSSSTYRYWDYWGTQVTAFDLHTPHTELIVTGRSV
VQTAPAPARPTDVPGWDGLTDDRVSDRFVEFVRPTVSTPEHPELLAAARELAAANTPADFLPAVGDWVREKLRYQPGTTE
VRTSAVEAWQQGVGVCQDFAHLALVLMRAAGMPARYVSGYQHPSADAAVGETVSGQSHAWVEGWLGEWWGFDPTNGVPAG
EQHVVVARGRDYNDVPPMFGVYSGGASTSLGVTVSVTRLG

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2569c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013589
- InterPro:   IPR002931 [H]

Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 30730; Mature: 30599

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWQIRIEHSTGYRYASPVISSYNEARIIPQTGDRQLTLEATVRTEPSSSTYRYWDYWGT
CCEEEEEECCCCCEEHHHHHHCCCCCEEECCCCCCEEEEEEEEEECCCCCCEEEEEECCC
QVTAFDLHTPHTELIVTGRSVVQTAPAPARPTDVPGWDGLTDDRVSDRFVEFVRPTVSTP
EEEEEECCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
EHPELLAAARELAAANTPADFLPAVGDWVREKLRYQPGTTEVRTSAVEAWQQGVGVCQDF
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AHLALVLMRAAGMPARYVSGYQHPSADAAVGETVSGQSHAWVEGWLGEWWGFDPTNGVPA
HHHHHHHHHHCCCCHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
GEQHVVVARGRDYNDVPPMFGVYSGGASTSLGVTVSVTRLG
CCCEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SWQIRIEHSTGYRYASPVISSYNEARIIPQTGDRQLTLEATVRTEPSSSTYRYWDYWGT
CEEEEEECCCCCEEHHHHHHCCCCCEEECCCCCCEEEEEEEEEECCCCCCEEEEEECCC
QVTAFDLHTPHTELIVTGRSVVQTAPAPARPTDVPGWDGLTDDRVSDRFVEFVRPTVSTP
EEEEEECCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
EHPELLAAARELAAANTPADFLPAVGDWVREKLRYQPGTTEVRTSAVEAWQQGVGVCQDF
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AHLALVLMRAAGMPARYVSGYQHPSADAAVGETVSGQSHAWVEGWLGEWWGFDPTNGVPA
HHHHHHHHHHCCCCHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
GEQHVVVARGRDYNDVPPMFGVYSGGASTSLGVTVSVTRLG
CCCEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]