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The map label for this gene is pdtaR [H]

Identifier: 158313870

GI number: 158313870

Start: 2446605

End: 2447204

Strand: Direct

Name: pdtaR [H]

Synonym: Franean1_2035

Alternate gene names: 158313870

Gene position: 2446605-2447204 (Clockwise)

Preceding gene: 158313867

Following gene: 158313871

Centisome position: 27.24

GC content: 68.67

Gene sequence:

>600_bases
ATGAGCCAGCCTTCCTCGACGCCGCGTCGGGTGTTGATCGCTGAGGACGAAGCGTTGATCCGGCTGGACCTCAGGGAGAT
GCTCCAGGAGGAGGGCTACGAGGTCGTAGGTGAGGCGGGGGACGGCGAGACCGCCGTGGCCCTCGCGGGGAAGCTGCGCC
CCGACCTCGTGATCCTGGACGTCAAGATGCCGAAGATGGACGGCATCGACGCGGGCGCGCGGATCGCCAAGGAGCGCATC
GCCCCGGTGGTCATCCTCACCGCGTTCAGCCAGCGCGAGCTCGTGGAGCGGGCGCGCGAGGCGGGGGCCATGGCGTACGT
GGTCAAGCCGTTCCAGAAGAAGGACCTGCTCCCGACCATCGAGATGGCGATGAGCCGGTTCACCGAGATCGTCAGCCTCG
AGGCCGAGGTCGAGGATCTGCAGGGGCGCCTGGAGGCTCGCAAGATCATCGAGCGGGCCAAGGGCGTGCTGCAGACCGAG
CACGGGATGACCGAGCCGGACGCGTTCCGCTGGATCCAGCGGACGTCGATGAACCAGCGCCGGACGATGCGCGCCGTCGC
GGAGGCTGTGCTCTCCGGTGAGGCGCTGCCCAGCTCGTGA

Upstream 100 bases:

>100_bases
GCGATTCGACCTACCGACCCGGTCAGATTACGGGCCGGCCGGTCGCAGCCCGCGTCAGCCACCCGAACGTGACGACCGCA
CAATCCAGGAGTTCAACTCG

Downstream 100 bases:

>100_bases
GCCCGCGCGACCCGGACCCGGGCCCGGACCCGGCCACCAGGCCGGAGCGGGCTACCGGTCCGGAGCCGGCAACGGGTCCC
GCCCAGGTCACCGATCCGGA

Product: response regulator receiver/ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSQPSSTPRRVLIAEDEALIRLDLREMLQEEGYEVVGEAGDGETAVALAGKLRPDLVILDVKMPKMDGIDAGARIAKERI
APVVILTAFSQRELVERAREAGAMAYVVKPFQKKDLLPTIEMAMSRFTEIVSLEAEVEDLQGRLEARKIIERAKGVLQTE
HGMTEPDAFRWIQRTSMNQRRTMRAVAEAVLSGEALPSS

Sequences:

>Translated_199_residues
MSQPSSTPRRVLIAEDEALIRLDLREMLQEEGYEVVGEAGDGETAVALAGKLRPDLVILDVKMPKMDGIDAGARIAKERI
APVVILTAFSQRELVERAREAGAMAYVVKPFQKKDLLPTIEMAMSRFTEIVSLEAEVEDLQGRLEARKIIERAKGVLQTE
HGMTEPDAFRWIQRTSMNQRRTMRAVAEAVLSGEALPSS
>Mature_198_residues
SQPSSTPRRVLIAEDEALIRLDLREMLQEEGYEVVGEAGDGETAVALAGKLRPDLVILDVKMPKMDGIDAGARIAKERIA
PVVILTAFSQRELVERAREAGAMAYVVKPFQKKDLLPTIEMAMSRFTEIVSLEAEVEDLQGRLEARKIIERAKGVLQTEH
GMTEPDAFRWIQRTSMNQRRTMRAVAEAVLSGEALPSS

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=134, Percent_Identity=32.8358208955224, Blast_Score=77, Evalue=5e-16,
Organism=Escherichia coli, GI1786599, Length=137, Percent_Identity=37.2262773722628, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87082052, Length=112, Percent_Identity=35.7142857142857, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1788521, Length=119, Percent_Identity=36.1344537815126, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788192, Length=104, Percent_Identity=37.5, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22089; Mature: 21958

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPSSTPRRVLIAEDEALIRLDLREMLQEEGYEVVGEAGDGETAVALAGKLRPDLVILD
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCEEEEE
VKMPKMDGIDAGARIAKERIAPVVILTAFSQRELVERAREAGAMAYVVKPFQKKDLLPTI
EECCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHH
EMAMSRFTEIVSLEAEVEDLQGRLEARKIIERAKGVLQTEHGMTEPDAFRWIQRTSMNQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHH
RTMRAVAEAVLSGEALPSS
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SQPSSTPRRVLIAEDEALIRLDLREMLQEEGYEVVGEAGDGETAVALAGKLRPDLVILD
CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCEEEEE
VKMPKMDGIDAGARIAKERIAPVVILTAFSQRELVERAREAGAMAYVVKPFQKKDLLPTI
EECCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHH
EMAMSRFTEIVSLEAEVEDLQGRLEARKIIERAKGVLQTEHGMTEPDAFRWIQRTSMNQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHH
RTMRAVAEAVLSGEALPSS
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]