Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is livJ [C]

Identifier: 158313871

GI number: 158313871

Start: 2447420

End: 2448970

Strand: Direct

Name: livJ [C]

Synonym: Franean1_2036

Alternate gene names: 158313871

Gene position: 2447420-2448970 (Clockwise)

Preceding gene: 158313870

Following gene: 158313872

Centisome position: 27.25

GC content: 75.37

Gene sequence:

>1551_bases
GTGTCGTCCGCCGCGCGCCGGCTGGACCACTGGGCCCGCAGGTCGGCGCGTGACACCCGGGGGCGGGTCATTCTCGCCGC
GGTGCTGGTGCTGGTGCTCGCTGTCCCGGCCGGGCTCGGCCTGGGGCTCGCCGCGGTGCTGGGCGGTGCTGGTTCTGGAG
CGTCGGCGACGAAGGTCGCCACGATCGGCGTGATGGCGCCCCTGTCGGGGGGCTCGGCCGACGCGGGCGTGAGTGTGCGC
GACGCGGTCACCCTCGCGGTCGAGGAGGCCAACCGGCAGGGGGCCGTCCCGGGCTGGAAGCTCGAGGTGGCCGCCCACGA
CGACCTCGCCCGCCCCGACGGCGGCGCGGCCGGGGCGGATCTGTTCGCCGACGACAGCCGGGTGATCGGGGTCGTCGGCC
CGCTCAGCTCCAGCGTGGCGATGGTGTCCCTGGACAGGCTGAGCAGCGCGGGCATCCCGGTGATCTCGCCGTCCAACGCG
GAACCGACGCTGACGGCGCCGGAGACCGCGTCGAACACCCGCCCGTACCCCACGTACTTCCGGCTCAGCGGCACCGACGA
ACTGCTCGCCCAGGTGACGGCCGACTATGCCGTGAACACGCTGGGTCGCTCGCGGATCAGTGTCGTCGACGGCGGCCCGG
ACTACGGCACGATCACGCTCGCGGAGCGGTTCGCCCGGCACGCGCGGAACGCGGGGGCGACCGTGCCGACGGTGCACCGG
GTTGACGGCGCGTCGACCGCCGGCGAGCAGGTCCGCGAGACGGCGAAGGCCATCCAGGACGAGGCGCCCGATCTGGTGTA
CCTGGCGACGGGTGCCGACTTCGCCGGCGAGCTGCGTGGAGCGCTCGCGGACGAGGGGGTGGCCGTCCAGGTGATGGGCG
CGGACGGCCTGCTCGACCGCGACTACGTGGAGCGCTCGGACTCCATGGCGGACGGTGACGTCGTCGCGGACCTGTCGGTG
CCGCTGTCACGCCTCCCGGCGGCCGGTGCGTTCGTGACGGCCTACTCGGAGCGGTTCGGCGGGCCAACGGTGGGCGCGGA
CGGGCTCCTGCCCGACGGGACGTCCACCGAGCCGGCGCCGGCGCCGGCTCCGGCGGCTTCCGGCGCTCCGGGTCGCGCCA
CGGCCACGTCCGCGTCCGTGGACCCGAGCCACACGTCCGGTTCCGTGTCCGCGGCCGACGAGGCGGGCGCGAGCAGATCC
GGCGCGAGCGAGGCCGGTACGGCGAGCCCCTCGGAGCGTGAGCTGGAGGTGCGCCGCGCCCGGGACGCCGCCCTGGCGGA
TCTGCGGGAGGCGGCGATCCCGCCGGTGGCGGCCTACGCCTACGACGCCGCGCGGGCGCTGATCCGGGCGGCGGCGGCGG
TCCTGCCCGGCCGGACGGAGGTGGACGTGGCGACCCGCCAGGCGCTGGTCCGCGCGGTCGGTGCCGGGGACTTCGCCGGA
GTCACCGGCCAGGTCGCCTTCGACACGAAGGGCGACGTCATCGATCCGCGCGTGGTGCTGTACTCGGTGCTCGGTGGAAA
CTTCGTCCCGTTGCAGGTCGACTCACCCTGA

Upstream 100 bases:

>100_bases
CGCGGCGGGCCGGAATCCAGCAGGCGGTTCAGCGCCCGCGGCGGGCTCGGAGCCGGCGCGGCCGGCTGCCGGGGTGACAC
TCGCCGGGTGGGTGCGTCCG

Downstream 100 bases:

>100_bases
TTGCTTCCCGCGACGTCTGGGTGCCAAAGCACGCCTAGTGCCACACGAAGTCACGACACTCTTACTTTCAGCTTTCATCG
CTCGGGTGGAGCCGCTAGGT

Product: extracellular ligand-binding receptor

Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MSSAARRLDHWARRSARDTRGRVILAAVLVLVLAVPAGLGLGLAAVLGGAGSGASATKVATIGVMAPLSGGSADAGVSVR
DAVTLAVEEANRQGAVPGWKLEVAAHDDLARPDGGAAGADLFADDSRVIGVVGPLSSSVAMVSLDRLSSAGIPVISPSNA
EPTLTAPETASNTRPYPTYFRLSGTDELLAQVTADYAVNTLGRSRISVVDGGPDYGTITLAERFARHARNAGATVPTVHR
VDGASTAGEQVRETAKAIQDEAPDLVYLATGADFAGELRGALADEGVAVQVMGADGLLDRDYVERSDSMADGDVVADLSV
PLSRLPAAGAFVTAYSERFGGPTVGADGLLPDGTSTEPAPAPAPAASGAPGRATATSASVDPSHTSGSVSAADEAGASRS
GASEAGTASPSERELEVRRARDAALADLREAAIPPVAAYAYDAARALIRAAAAVLPGRTEVDVATRQALVRAVGAGDFAG
VTGQVAFDTKGDVIDPRVVLYSVLGGNFVPLQVDSP

Sequences:

>Translated_516_residues
MSSAARRLDHWARRSARDTRGRVILAAVLVLVLAVPAGLGLGLAAVLGGAGSGASATKVATIGVMAPLSGGSADAGVSVR
DAVTLAVEEANRQGAVPGWKLEVAAHDDLARPDGGAAGADLFADDSRVIGVVGPLSSSVAMVSLDRLSSAGIPVISPSNA
EPTLTAPETASNTRPYPTYFRLSGTDELLAQVTADYAVNTLGRSRISVVDGGPDYGTITLAERFARHARNAGATVPTVHR
VDGASTAGEQVRETAKAIQDEAPDLVYLATGADFAGELRGALADEGVAVQVMGADGLLDRDYVERSDSMADGDVVADLSV
PLSRLPAAGAFVTAYSERFGGPTVGADGLLPDGTSTEPAPAPAPAASGAPGRATATSASVDPSHTSGSVSAADEAGASRS
GASEAGTASPSERELEVRRARDAALADLREAAIPPVAAYAYDAARALIRAAAAVLPGRTEVDVATRQALVRAVGAGDFAG
VTGQVAFDTKGDVIDPRVVLYSVLGGNFVPLQVDSP
>Mature_515_residues
SSAARRLDHWARRSARDTRGRVILAAVLVLVLAVPAGLGLGLAAVLGGAGSGASATKVATIGVMAPLSGGSADAGVSVRD
AVTLAVEEANRQGAVPGWKLEVAAHDDLARPDGGAAGADLFADDSRVIGVVGPLSSSVAMVSLDRLSSAGIPVISPSNAE
PTLTAPETASNTRPYPTYFRLSGTDELLAQVTADYAVNTLGRSRISVVDGGPDYGTITLAERFARHARNAGATVPTVHRV
DGASTAGEQVRETAKAIQDEAPDLVYLATGADFAGELRGALADEGVAVQVMGADGLLDRDYVERSDSMADGDVVADLSVP
LSRLPAAGAFVTAYSERFGGPTVGADGLLPDGTSTEPAPAPAPAASGAPGRATATSASVDPSHTSGSVSAADEAGASRSG
ASEAGTASPSERELEVRRARDAALADLREAAIPPVAAYAYDAARALIRAAAAVLPGRTEVDVATRQALVRAVGAGDFAGV
TGQVAFDTKGDVIDPRVVLYSVLGGNFVPLQVDSP

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 51915; Mature: 51784

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAARRLDHWARRSARDTRGRVILAAVLVLVLAVPAGLGLGLAAVLGGAGSGASATKVA
CCHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEE
TIGVMAPLSGGSADAGVSVRDAVTLAVEEANRQGAVPGWKLEVAAHDDLARPDGGAAGAD
EEEEEEECCCCCCCCCCCHHHHEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
LFADDSRVIGVVGPLSSSVAMVSLDRLSSAGIPVISPSNAEPTLTAPETASNTRPYPTYF
EECCCCEEEEEECCCCCCCCEEEHHHHCCCCCCEECCCCCCCCEECCCCCCCCCCCCEEE
RLSGTDELLAQVTADYAVNTLGRSRISVVDGGPDYGTITLAERFARHARNAGATVPTVHR
EECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCEEEE
VDGASTAGEQVRETAKAIQDEAPDLVYLATGADFAGELRGALADEGVAVQVMGADGLLDR
CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCH
DYVERSDSMADGDVVADLSVPLSRLPAAGAFVTAYSERFGGPTVGADGLLPDGTSTEPAP
HHHHHCCCCCCCCEEEECCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
APAPAASGAPGRATATSASVDPSHTSGSVSAADEAGASRSGASEAGTASPSERELEVRRA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
RDAALADLREAAIPPVAAYAYDAARALIRAAAAVLPGRTEVDVATRQALVRAVGAGDFAG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
VTGQVAFDTKGDVIDPRVVLYSVLGGNFVPLQVDSP
CCCEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure 
SSAARRLDHWARRSARDTRGRVILAAVLVLVLAVPAGLGLGLAAVLGGAGSGASATKVA
CHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEE
TIGVMAPLSGGSADAGVSVRDAVTLAVEEANRQGAVPGWKLEVAAHDDLARPDGGAAGAD
EEEEEEECCCCCCCCCCCHHHHEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
LFADDSRVIGVVGPLSSSVAMVSLDRLSSAGIPVISPSNAEPTLTAPETASNTRPYPTYF
EECCCCEEEEEECCCCCCCCEEEHHHHCCCCCCEECCCCCCCCEECCCCCCCCCCCCEEE
RLSGTDELLAQVTADYAVNTLGRSRISVVDGGPDYGTITLAERFARHARNAGATVPTVHR
EECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCEEEE
VDGASTAGEQVRETAKAIQDEAPDLVYLATGADFAGELRGALADEGVAVQVMGADGLLDR
CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCH
DYVERSDSMADGDVVADLSVPLSRLPAAGAFVTAYSERFGGPTVGADGLLPDGTSTEPAP
HHHHHCCCCCCCCEEEECCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
APAPAASGAPGRATATSASVDPSHTSGSVSAADEAGASRSGASEAGTASPSERELEVRRA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
RDAALADLREAAIPPVAAYAYDAARALIRAAAAVLPGRTEVDVATRQALVRAVGAGDFAG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
VTGQVAFDTKGDVIDPRVVLYSVLGGNFVPLQVDSP
CCCEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]