| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ykgA [H]
Identifier: 158313847
GI number: 158313847
Start: 2418353
End: 2419309
Strand: Direct
Name: ykgA [H]
Synonym: Franean1_2012
Alternate gene names: 158313847
Gene position: 2418353-2419309 (Clockwise)
Preceding gene: 158313843
Following gene: 158313848
Centisome position: 26.92
GC content: 68.76
Gene sequence:
>957_bases ATGGCACGGACGAAGTCCTGCCAGACCGACGATCCGTGTCCGTCCGATGTTCCCGTGATTCCGCGGTTGTCTCGTCCGCG GAGCCTGCGGCGGCGGGCTGGCATCCTGGTGTGCGTGGACGCTGCCCCGGGAGATTCGACTGTCTCGCGTCGAGCCTCTG CCCGCAGGTACCTCATGTGTCCACCGGAGTACTTCGACGTCACCTATGCCATCAACCCGTGGATGCGCCCCGAGGTACCG ACGGACCTCGCCCGGGTACACGCCCAGTGGGAGGCGCTGCGGGCCGTGTATCTGGGGCTGGGCCACCAGGTCGAGTTGGT CGAGCCGGTTCCCGGGCTACCTGACATGGTCTACGCGGCCAACGGCGGCCTGGTCGTCGACGGCGTCGCGGTCGGGGCGC GTTTCCGGTACCCGCAGCGGCGGGCCGAGGCTGACCACTACCTCGACTGGTTCCGCGGGGCTGGAATGCGGCGGGTGCAC GCCCCGTCGTACGTCAACGAGGGCGAAGGAGATTTCCTGCCGGTCGGCGGCGTTGTCCTGGCCGGGACGGGTTTCCGTAC CGAGCCACGTGCGCACGCCGAGGTGGCGGGCGTTCTCGGCCGCAGGGTGCTGACCCTGGAGCTGGTCGATCCGCGTTTCT ACCATCTCGACACCGCGCTCTGTGTCCTCACCGAGGACCTTGTCGCGTACTACCCGGCGGCATTCAGCGCGCGGAGCAAC GCCCTGCTCCGGGAGACATTTCCGGGGGCTCTCACGGTGTCCGAGCGGGAGGGGGTCGCGTTCGCGCTGAACGCGGTCAG TGATGGGCTGCACGTGGTGATCTCGGCCGATGCTGTCGGGTTCGCGAGCACTCTGCGTGACCATGGATTCATCCCGGTCG GCGTGGCCACGGATGAGATCCGGCGGGGTGGCGGCGGCGCGAAATGCTGCACGCTGGAACTGCGTCCGGCCGGCTGA
Upstream 100 bases:
>100_bases GAGGTCGAAGTACGGCATCGGTAGCCCCCGTTCGCTAGACGACGTTCGTTGACAATGGACTCGGGTGAGGACGCCGCGTC CGGCCCTGGAGGGCCTGCGC
Downstream 100 bases:
>100_bases GCCTGGCCGACTGAGCTCGGGAGTGCTCACTGAGCGAGACCGCCGCGACGTTTCGGCGAAGATCGTGCGCGTTCCGTGGG CGCGTGGGGCGCGGCAATCA
Product: amidinotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MARTKSCQTDDPCPSDVPVIPRLSRPRSLRRRAGILVCVDAAPGDSTVSRRASARRYLMCPPEYFDVTYAINPWMRPEVP TDLARVHAQWEALRAVYLGLGHQVELVEPVPGLPDMVYAANGGLVVDGVAVGARFRYPQRRAEADHYLDWFRGAGMRRVH APSYVNEGEGDFLPVGGVVLAGTGFRTEPRAHAEVAGVLGRRVLTLELVDPRFYHLDTALCVLTEDLVAYYPAAFSARSN ALLRETFPGALTVSEREGVAFALNAVSDGLHVVISADAVGFASTLRDHGFIPVGVATDEIRRGGGGAKCCTLELRPAG
Sequences:
>Translated_318_residues MARTKSCQTDDPCPSDVPVIPRLSRPRSLRRRAGILVCVDAAPGDSTVSRRASARRYLMCPPEYFDVTYAINPWMRPEVP TDLARVHAQWEALRAVYLGLGHQVELVEPVPGLPDMVYAANGGLVVDGVAVGARFRYPQRRAEADHYLDWFRGAGMRRVH APSYVNEGEGDFLPVGGVVLAGTGFRTEPRAHAEVAGVLGRRVLTLELVDPRFYHLDTALCVLTEDLVAYYPAAFSARSN ALLRETFPGALTVSEREGVAFALNAVSDGLHVVISADAVGFASTLRDHGFIPVGVATDEIRRGGGGAKCCTLELRPAG >Mature_317_residues ARTKSCQTDDPCPSDVPVIPRLSRPRSLRRRAGILVCVDAAPGDSTVSRRASARRYLMCPPEYFDVTYAINPWMRPEVPT DLARVHAQWEALRAVYLGLGHQVELVEPVPGLPDMVYAANGGLVVDGVAVGARFRYPQRRAEADHYLDWFRGAGMRRVHA PSYVNEGEGDFLPVGGVVLAGTGFRTEPRAHAEVAGVLGRRVLTLELVDPRFYHLDTALCVLTEDLVAYYPAAFSARSNA LLRETFPGALTVSEREGVAFALNAVSDGLHVVISADAVGFASTLRDHGFIPVGVATDEIRRGGGGAKCCTLELRPAG
Specific function: Unknown
COG id: COG1834
COG function: function code E; N-Dimethylarginine dimethylaminohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DDAH family [H]
Homologues:
Organism=Caenorhabditis elegans, GI25147433, Length=269, Percent_Identity=35.6877323420074, Blast_Score=160, Evalue=9e-40, Organism=Caenorhabditis elegans, GI17540300, Length=273, Percent_Identity=31.8681318681319, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71998636, Length=266, Percent_Identity=31.5789473684211, Blast_Score=141, Evalue=4e-34, Organism=Caenorhabditis elegans, GI71998638, Length=105, Percent_Identity=39.0476190476191, Blast_Score=88, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003198 [H]
Pfam domain/function: PF02274 Amidinotransf [H]
EC number: NA
Molecular weight: Translated: 34437; Mature: 34305
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTKSCQTDDPCPSDVPVIPRLSRPRSLRRRAGILVCVDAAPGDSTVSRRASARRYLMC CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHCCEEEEC PPEYFDVTYAINPWMRPEVPTDLARVHAQWEALRAVYLGLGHQVELVEPVPGLPDMVYAA CHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEC NGGLVVDGVAVGARFRYPQRRAEADHYLDWFRGAGMRRVHAPSYVNEGEGDFLPVGGVVL CCCEEEEEEEECEEECCCHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCEEE AGTGFRTEPRAHAEVAGVLGRRVLTLELVDPRFYHLDTALCVLTEDLVAYYPAAFSARSN ECCCCCCCCHHHHHHHHHHCCEEEEEEEECCEEEEHHHHHHHHHHHHHHHCCHHHCCCCC ALLRETFPGALTVSEREGVAFALNAVSDGLHVVISADAVGFASTLRDHGFIPVGVATDEI CHHHHCCCCEEEEECCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCEEEECCHHHH RRGGGGAKCCTLELRPAG HCCCCCCEEEEEEEECCC >Mature Secondary Structure ARTKSCQTDDPCPSDVPVIPRLSRPRSLRRRAGILVCVDAAPGDSTVSRRASARRYLMC CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHCCEEEEC PPEYFDVTYAINPWMRPEVPTDLARVHAQWEALRAVYLGLGHQVELVEPVPGLPDMVYAA CHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEC NGGLVVDGVAVGARFRYPQRRAEADHYLDWFRGAGMRRVHAPSYVNEGEGDFLPVGGVVL CCCEEEEEEEECEEECCCHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCEEE AGTGFRTEPRAHAEVAGVLGRRVLTLELVDPRFYHLDTALCVLTEDLVAYYPAAFSARSN ECCCCCCCCHHHHHHHHHHCCEEEEEEEECCEEEEHHHHHHHHHHHHHHHCCHHHCCCCC ALLRETFPGALTVSEREGVAFALNAVSDGLHVVISADAVGFASTLRDHGFIPVGVATDEI CHHHHCCCCEEEEECCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCEEEECCHHHH RRGGGGAKCCTLELRPAG HCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]