Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is ykgA [H]

Identifier: 158313847

GI number: 158313847

Start: 2418353

End: 2419309

Strand: Direct

Name: ykgA [H]

Synonym: Franean1_2012

Alternate gene names: 158313847

Gene position: 2418353-2419309 (Clockwise)

Preceding gene: 158313843

Following gene: 158313848

Centisome position: 26.92

GC content: 68.76

Gene sequence:

>957_bases
ATGGCACGGACGAAGTCCTGCCAGACCGACGATCCGTGTCCGTCCGATGTTCCCGTGATTCCGCGGTTGTCTCGTCCGCG
GAGCCTGCGGCGGCGGGCTGGCATCCTGGTGTGCGTGGACGCTGCCCCGGGAGATTCGACTGTCTCGCGTCGAGCCTCTG
CCCGCAGGTACCTCATGTGTCCACCGGAGTACTTCGACGTCACCTATGCCATCAACCCGTGGATGCGCCCCGAGGTACCG
ACGGACCTCGCCCGGGTACACGCCCAGTGGGAGGCGCTGCGGGCCGTGTATCTGGGGCTGGGCCACCAGGTCGAGTTGGT
CGAGCCGGTTCCCGGGCTACCTGACATGGTCTACGCGGCCAACGGCGGCCTGGTCGTCGACGGCGTCGCGGTCGGGGCGC
GTTTCCGGTACCCGCAGCGGCGGGCCGAGGCTGACCACTACCTCGACTGGTTCCGCGGGGCTGGAATGCGGCGGGTGCAC
GCCCCGTCGTACGTCAACGAGGGCGAAGGAGATTTCCTGCCGGTCGGCGGCGTTGTCCTGGCCGGGACGGGTTTCCGTAC
CGAGCCACGTGCGCACGCCGAGGTGGCGGGCGTTCTCGGCCGCAGGGTGCTGACCCTGGAGCTGGTCGATCCGCGTTTCT
ACCATCTCGACACCGCGCTCTGTGTCCTCACCGAGGACCTTGTCGCGTACTACCCGGCGGCATTCAGCGCGCGGAGCAAC
GCCCTGCTCCGGGAGACATTTCCGGGGGCTCTCACGGTGTCCGAGCGGGAGGGGGTCGCGTTCGCGCTGAACGCGGTCAG
TGATGGGCTGCACGTGGTGATCTCGGCCGATGCTGTCGGGTTCGCGAGCACTCTGCGTGACCATGGATTCATCCCGGTCG
GCGTGGCCACGGATGAGATCCGGCGGGGTGGCGGCGGCGCGAAATGCTGCACGCTGGAACTGCGTCCGGCCGGCTGA

Upstream 100 bases:

>100_bases
GAGGTCGAAGTACGGCATCGGTAGCCCCCGTTCGCTAGACGACGTTCGTTGACAATGGACTCGGGTGAGGACGCCGCGTC
CGGCCCTGGAGGGCCTGCGC

Downstream 100 bases:

>100_bases
GCCTGGCCGACTGAGCTCGGGAGTGCTCACTGAGCGAGACCGCCGCGACGTTTCGGCGAAGATCGTGCGCGTTCCGTGGG
CGCGTGGGGCGCGGCAATCA

Product: amidinotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MARTKSCQTDDPCPSDVPVIPRLSRPRSLRRRAGILVCVDAAPGDSTVSRRASARRYLMCPPEYFDVTYAINPWMRPEVP
TDLARVHAQWEALRAVYLGLGHQVELVEPVPGLPDMVYAANGGLVVDGVAVGARFRYPQRRAEADHYLDWFRGAGMRRVH
APSYVNEGEGDFLPVGGVVLAGTGFRTEPRAHAEVAGVLGRRVLTLELVDPRFYHLDTALCVLTEDLVAYYPAAFSARSN
ALLRETFPGALTVSEREGVAFALNAVSDGLHVVISADAVGFASTLRDHGFIPVGVATDEIRRGGGGAKCCTLELRPAG

Sequences:

>Translated_318_residues
MARTKSCQTDDPCPSDVPVIPRLSRPRSLRRRAGILVCVDAAPGDSTVSRRASARRYLMCPPEYFDVTYAINPWMRPEVP
TDLARVHAQWEALRAVYLGLGHQVELVEPVPGLPDMVYAANGGLVVDGVAVGARFRYPQRRAEADHYLDWFRGAGMRRVH
APSYVNEGEGDFLPVGGVVLAGTGFRTEPRAHAEVAGVLGRRVLTLELVDPRFYHLDTALCVLTEDLVAYYPAAFSARSN
ALLRETFPGALTVSEREGVAFALNAVSDGLHVVISADAVGFASTLRDHGFIPVGVATDEIRRGGGGAKCCTLELRPAG
>Mature_317_residues
ARTKSCQTDDPCPSDVPVIPRLSRPRSLRRRAGILVCVDAAPGDSTVSRRASARRYLMCPPEYFDVTYAINPWMRPEVPT
DLARVHAQWEALRAVYLGLGHQVELVEPVPGLPDMVYAANGGLVVDGVAVGARFRYPQRRAEADHYLDWFRGAGMRRVHA
PSYVNEGEGDFLPVGGVVLAGTGFRTEPRAHAEVAGVLGRRVLTLELVDPRFYHLDTALCVLTEDLVAYYPAAFSARSNA
LLRETFPGALTVSEREGVAFALNAVSDGLHVVISADAVGFASTLRDHGFIPVGVATDEIRRGGGGAKCCTLELRPAG

Specific function: Unknown

COG id: COG1834

COG function: function code E; N-Dimethylarginine dimethylaminohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DDAH family [H]

Homologues:

Organism=Caenorhabditis elegans, GI25147433, Length=269, Percent_Identity=35.6877323420074, Blast_Score=160, Evalue=9e-40,
Organism=Caenorhabditis elegans, GI17540300, Length=273, Percent_Identity=31.8681318681319, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI71998636, Length=266, Percent_Identity=31.5789473684211, Blast_Score=141, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI71998638, Length=105, Percent_Identity=39.0476190476191, Blast_Score=88, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003198 [H]

Pfam domain/function: PF02274 Amidinotransf [H]

EC number: NA

Molecular weight: Translated: 34437; Mature: 34305

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTKSCQTDDPCPSDVPVIPRLSRPRSLRRRAGILVCVDAAPGDSTVSRRASARRYLMC
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHCCEEEEC
PPEYFDVTYAINPWMRPEVPTDLARVHAQWEALRAVYLGLGHQVELVEPVPGLPDMVYAA
CHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEC
NGGLVVDGVAVGARFRYPQRRAEADHYLDWFRGAGMRRVHAPSYVNEGEGDFLPVGGVVL
CCCEEEEEEEECEEECCCHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCEEE
AGTGFRTEPRAHAEVAGVLGRRVLTLELVDPRFYHLDTALCVLTEDLVAYYPAAFSARSN
ECCCCCCCCHHHHHHHHHHCCEEEEEEEECCEEEEHHHHHHHHHHHHHHHCCHHHCCCCC
ALLRETFPGALTVSEREGVAFALNAVSDGLHVVISADAVGFASTLRDHGFIPVGVATDEI
CHHHHCCCCEEEEECCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCEEEECCHHHH
RRGGGGAKCCTLELRPAG
HCCCCCCEEEEEEEECCC
>Mature Secondary Structure 
ARTKSCQTDDPCPSDVPVIPRLSRPRSLRRRAGILVCVDAAPGDSTVSRRASARRYLMC
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHCCEEEEC
PPEYFDVTYAINPWMRPEVPTDLARVHAQWEALRAVYLGLGHQVELVEPVPGLPDMVYAA
CHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEC
NGGLVVDGVAVGARFRYPQRRAEADHYLDWFRGAGMRRVHAPSYVNEGEGDFLPVGGVVL
CCCEEEEEEEECEEECCCHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCEEE
AGTGFRTEPRAHAEVAGVLGRRVLTLELVDPRFYHLDTALCVLTEDLVAYYPAAFSARSN
ECCCCCCCCHHHHHHHHHHCCEEEEEEEECCEEEEHHHHHHHHHHHHHHHCCHHHCCCCC
ALLRETFPGALTVSEREGVAFALNAVSDGLHVVISADAVGFASTLRDHGFIPVGVATDEI
CHHHHCCCCEEEEECCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCEEEECCHHHH
RRGGGGAKCCTLELRPAG
HCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]