| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is caiD [C]
Identifier: 158313843
GI number: 158313843
Start: 2414054
End: 2414884
Strand: Direct
Name: caiD [C]
Synonym: Franean1_2008
Alternate gene names: 158313843
Gene position: 2414054-2414884 (Clockwise)
Preceding gene: 158313842
Following gene: 158313847
Centisome position: 26.88
GC content: 63.66
Gene sequence:
>831_bases GTGGGTAGCCACAGTTTCGAGATAGACGTGGTCGACAAGGTCGCGTGGCTCGTTCTCTCCAGGCCGGAAGAACTCAACAC GCTTCAACCAGATTTCTGGCGAGATCTCCCCCTGGCCGTTTCGAAGATTGACCAGGGCGGAGGCGTCCGGGTGCTCGTGA TCTCGTCGACCGGTCGACACTTCACCGCGGGCCTGGACCTTAATGTCTTCGGCGGCACGGAGCTTTTTCCGGACGGAGAG CCGGCTCGTGTCAACATGGCCCGCCGCTCGCTTATTCTTCGCATGCAGGGCGCTCTCACTGCGCTGGAACGGGTGCGCTT CCCCGTTCTCGCGGCGGTGCAGGGCGGTTGTGTCGGGGGCGGCCTCGACCTTGTGACGGCCTGCGACATGCGTTATGCCA CCGTGGACGCGTTTTTCGTTGTTCAGGAGACAAAGATCGGAATTACCGCCGATCTCGGCACACTGCAGCGACTCCCCAAG ATAATTCCGGACGGAGTTGCGCGTGAGCTCGTCTACACCGGTCGTCGACTTCCCGCCGACCGTGCGCTCGCCGTCGGCCT GGTGAACGAGGTCTACCCGGATCAGGAAGCGATGCTGCGCGGCGTGCGCGAGGTTGCGGAGGAAATTGCCGCCAACAGCC CAATGGCGGTCTGGGGGAGCAAGGAGATGCTGCTCTACTCGCGCGATCACCCCGTCGCCGACGCCCTGGCACACACGGCA ACCTGGCAGGCGGGGGCACTCCAGCCAGTAGACGTTACCGAGTCGATTCAGGCCCGGATGGAGAAGCGCGTCCCGAGCTA CCCGGATCTCCCGTCGACCTCGGATACCTGA
Upstream 100 bases:
>100_bases GCCAGGGCGCTCGGCACCGTAGGCGTGATCTTGCGGCGAGTGTGTCGATGGGAGAAGGTGGACAGATTCGGCCGGGACAC AGTTTCTTCGGGAGTCTTTC
Downstream 100 bases:
>100_bases CGGCGCCGTCGTCCGAATCCGAGTGTCCTGTCGAAGCCCGTCCTGTACGAGACCGAATCCCTCCTCGTGGTTCGCCTCAG GAGGGTGGGTTCAGGTGTCG
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MGSHSFEIDVVDKVAWLVLSRPEELNTLQPDFWRDLPLAVSKIDQGGGVRVLVISSTGRHFTAGLDLNVFGGTELFPDGE PARVNMARRSLILRMQGALTALERVRFPVLAAVQGGCVGGGLDLVTACDMRYATVDAFFVVQETKIGITADLGTLQRLPK IIPDGVARELVYTGRRLPADRALAVGLVNEVYPDQEAMLRGVREVAEEIAANSPMAVWGSKEMLLYSRDHPVADALAHTA TWQAGALQPVDVTESIQARMEKRVPSYPDLPSTSDT
Sequences:
>Translated_276_residues MGSHSFEIDVVDKVAWLVLSRPEELNTLQPDFWRDLPLAVSKIDQGGGVRVLVISSTGRHFTAGLDLNVFGGTELFPDGE PARVNMARRSLILRMQGALTALERVRFPVLAAVQGGCVGGGLDLVTACDMRYATVDAFFVVQETKIGITADLGTLQRLPK IIPDGVARELVYTGRRLPADRALAVGLVNEVYPDQEAMLRGVREVAEEIAANSPMAVWGSKEMLLYSRDHPVADALAHTA TWQAGALQPVDVTESIQARMEKRVPSYPDLPSTSDT >Mature_275_residues GSHSFEIDVVDKVAWLVLSRPEELNTLQPDFWRDLPLAVSKIDQGGGVRVLVISSTGRHFTAGLDLNVFGGTELFPDGEP ARVNMARRSLILRMQGALTALERVRFPVLAAVQGGCVGGGLDLVTACDMRYATVDAFFVVQETKIGITADLGTLQRLPKI IPDGVARELVYTGRRLPADRALAVGLVNEVYPDQEAMLRGVREVAEEIAANSPMAVWGSKEMLLYSRDHPVADALAHTAT WQAGALQPVDVTESIQARMEKRVPSYPDLPSTSDT
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=266, Percent_Identity=43.984962406015, Blast_Score=225, Evalue=3e-59, Organism=Homo sapiens, GI194097323, Length=271, Percent_Identity=28.4132841328413, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI20127408, Length=205, Percent_Identity=28.780487804878, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI221307494, Length=212, Percent_Identity=26.4150943396226, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI221136756, Length=212, Percent_Identity=26.4150943396226, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI221136753, Length=212, Percent_Identity=26.4150943396226, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI68989263, Length=228, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI260274832, Length=227, Percent_Identity=26.8722466960352, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI45643119, Length=197, Percent_Identity=27.4111675126904, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI260275230, Length=197, Percent_Identity=27.4111675126904, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI31542718, Length=261, Percent_Identity=25.6704980842912, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI116235487, Length=198, Percent_Identity=26.7676767676768, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4502327, Length=258, Percent_Identity=27.906976744186, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI221142681, Length=224, Percent_Identity=32.5892857142857, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1787659, Length=256, Percent_Identity=28.515625, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788682, Length=220, Percent_Identity=29.0909090909091, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1790281, Length=194, Percent_Identity=30.4123711340206, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI87082183, Length=273, Percent_Identity=23.8095238095238, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787660, Length=264, Percent_Identity=26.1363636363636, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788597, Length=208, Percent_Identity=26.4423076923077, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17536985, Length=258, Percent_Identity=35.2713178294574, Blast_Score=183, Evalue=7e-47, Organism=Caenorhabditis elegans, GI17534483, Length=268, Percent_Identity=36.1940298507463, Blast_Score=167, Evalue=6e-42, Organism=Caenorhabditis elegans, GI25145438, Length=256, Percent_Identity=29.296875, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17554946, Length=258, Percent_Identity=27.906976744186, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17540714, Length=215, Percent_Identity=28.8372093023256, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17558304, Length=169, Percent_Identity=27.2189349112426, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17560910, Length=239, Percent_Identity=24.6861924686192, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17540306, Length=254, Percent_Identity=26.7716535433071, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI19920382, Length=247, Percent_Identity=38.4615384615385, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI24653139, Length=258, Percent_Identity=29.4573643410853, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI20129971, Length=258, Percent_Identity=24.4186046511628, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI24653477, Length=258, Percent_Identity=24.4186046511628, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI24650670, Length=263, Percent_Identity=25.8555133079848, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24583165, Length=212, Percent_Identity=26.4150943396226, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI45550169, Length=219, Percent_Identity=25.5707762557078, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19921018, Length=211, Percent_Identity=25.5924170616114, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 29979; Mature: 29848
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5 ; PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSHSFEIDVVDKVAWLVLSRPEELNTLQPDFWRDLPLAVSKIDQGGGVRVLVISSTGRH CCCCEEEEEHHHHHHHHHHCCCHHCCCCCCHHHHCCCHHHHHHCCCCCEEEEEEECCCCE FTAGLDLNVFGGTELFPDGEPARVNMARRSLILRMQGALTALERVRFPVLAAVQGGCVGG EEECEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC GLDLVTACDMRYATVDAFFVVQETKIGITADLGTLQRLPKIIPDGVARELVYTGRRLPAD CHHHHHHCCCHHEEEEEEEEEEECCCCEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCHH RALAVGLVNEVYPDQEAMLRGVREVAEEIAANSPMAVWGSKEMLLYSRDHPVADALAHTA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCHHHHHHHHC TWQAGALQPVDVTESIQARMEKRVPSYPDLPSTSDT CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GSHSFEIDVVDKVAWLVLSRPEELNTLQPDFWRDLPLAVSKIDQGGGVRVLVISSTGRH CCCEEEEEHHHHHHHHHHCCCHHCCCCCCHHHHCCCHHHHHHCCCCCEEEEEEECCCCE FTAGLDLNVFGGTELFPDGEPARVNMARRSLILRMQGALTALERVRFPVLAAVQGGCVGG EEECEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC GLDLVTACDMRYATVDAFFVVQETKIGITADLGTLQRLPKIIPDGVARELVYTGRRLPAD CHHHHHHCCCHHEEEEEEEEEEECCCCEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCHH RALAVGLVNEVYPDQEAMLRGVREVAEEIAANSPMAVWGSKEMLLYSRDHPVADALAHTA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCHHHHHHHHC TWQAGALQPVDVTESIQARMEKRVPSYPDLPSTSDT CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA