| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313848
Identifier: 158313848
GI number: 158313848
Start: 2419426
End: 2419665
Strand: Direct
Name: 158313848
Synonym: Franean1_2013
Alternate gene names: NA
Gene position: 2419426-2419665 (Clockwise)
Preceding gene: 158313847
Following gene: 158313850
Centisome position: 26.94
GC content: 56.67
Gene sequence:
>240_bases ATGCGTTGTGGAGGTACTTTCTATCGAGGCATGAACTACTCTGGAACGAATCATCGGGACGACGTCGGACAACCTATGAC TAAAATTGTTGCGATGGTCGCGGCCGTGGACGGCCTGCCGACCATAGAAGAAACAGATGCAATGCTGATCGAGCTGAACC GGCTTCCACGGGATCCGGTGGTGACCGATCTGATCGACGAGCTGCTGGATTTCCGGTCGCTCCTCGCCGCCGCCGTCTGA
Upstream 100 bases:
>100_bases TCGGGAGTGCTCACTGAGCGAGACCGCCGCGACGTTTCGGCGAAGATCGTGCGCGTTCCGTGGGCGCGTGGGGCGCGGCA ATCAGGACAACTTTCGCCTG
Downstream 100 bases:
>100_bases GCGGCTGCTCCGAAGCGACCGGAACCCGGCTACGCCGGACGGTGTTTCCGCCCTACCGGGCAGGTGACGCCGTCCGGTGA GACCTCATCGGGTCACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MRCGGTFYRGMNYSGTNHRDDVGQPMTKIVAMVAAVDGLPTIEETDAMLIELNRLPRDPVVTDLIDELLDFRSLLAAAV
Sequences:
>Translated_79_residues MRCGGTFYRGMNYSGTNHRDDVGQPMTKIVAMVAAVDGLPTIEETDAMLIELNRLPRDPVVTDLIDELLDFRSLLAAAV >Mature_79_residues MRCGGTFYRGMNYSGTNHRDDVGQPMTKIVAMVAAVDGLPTIEETDAMLIELNRLPRDPVVTDLIDELLDFRSLLAAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8682; Mature: 8682
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCGGTFYRGMNYSGTNHRDDVGQPMTKIVAMVAAVDGLPTIEETDAMLIELNRLPRDPV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCH VTDLIDELLDFRSLLAAAV HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRCGGTFYRGMNYSGTNHRDDVGQPMTKIVAMVAAVDGLPTIEETDAMLIELNRLPRDPV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCH VTDLIDELLDFRSLLAAAV HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA