Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313841

Identifier: 158313841

GI number: 158313841

Start: 2411834

End: 2412841

Strand: Direct

Name: 158313841

Synonym: Franean1_2006

Alternate gene names: NA

Gene position: 2411834-2412841 (Clockwise)

Preceding gene: 158313838

Following gene: 158313842

Centisome position: 26.85

GC content: 67.76

Gene sequence:

>1008_bases
ATGAAGATCGATTTCACTCTGTCTGACGACATCGCCTCGACCTCGACCACTGCCGCCCGCGTCGAGAAGGAGGGGTACGC
CGGCGCCTGGGTCGGGGAGACCCGGCACGACCCGTTCATGCAGTGTCTTCAGGCCGCGACCGCGACCAGTTCCCTGACGA
TCGGGACATCGATCGCGATCGCGTTTGCCCGCACGCCGATGACACTGGCGAATCTGGGATACGACCTGGCGCAGTACAGC
GAGGGCCGGTTTGTCCTCGGCCTCGGATCGCAGATCAAGCCGCACATCGAGAAGCGCTTCTCGATGCCGTGGTCGCACCC
CGCTGCCCGCATGCGTGAGCTCATCCTGGCGATCCGGGCAATCTGGGACTGCTGGCAGAACGGCGCAAAGCTGGACTTCC
GCGGCGATTTCTACACCCACACGCTCATGACCCCGTTCTTCACCCCCAAGCCGCACTCCTTCGGCCCGCCCCCGATCTAC
CTCGCCGGGGTGGGACCCGGCATGACCGAGGTCGCCGGCGAGGTCGCGGACGGGTTCCTCGTCCATCCCTTCAGCACCAT
GCGCTACGTCGAGGAGGTGACGATTCCCGCACTGCTGCGCGGCCGGGCCAAGGCCGGCAAGACCGACCTGGAGGGCTTCA
CGATCTGCGGGCCTTCCTTCGTCACCATCGGCCGGACCGCGCAGGAGATGGACCGCGCGGTGGCCGCCACCAAGAAGCAG
ATCGCCTTCTACGGCTCCACCCCCGCCTACCGCGCCGTCTTCGACATGCACGGCTGGGGCGAGGTGCAGCCCGAGCTGAC
GGCCCTCTCCAAGCAGGGCCGCTGGGATGACATGGCCGACCTGGTGACCGACGAGATGATGGCCGAGTTCTCCGTCGTAG
GCACCCCCGAGGAGGTCGGCCGCGCACTCGGCGAGAAGATCGGTGGCGTCTACGCCCGGACAACGCTCTACGACTCGGGC
GGCTCCGACCCGGCGCACTGGCCCGCGGTGCTCGACGCGGCCCGCTGA

Upstream 100 bases:

>100_bases
GCACACGACGGACGTGGTGGCAGGATCGGTTGCCTGCGTCGGTCCGCTGGCACCAACCTGATGACCGGCGGCGTGCCCGG
GACTGCAACAAGGAGACGCG

Downstream 100 bases:

>100_bases
CCCGCCCGGCACGCCCCATCATCGGGAATGGGTAGCCGTCGTCAGGTGTCCTCCTAGGCGAGCCCCGAGTGGCAAAGGGG
GATGAGGATGGCCTCGAGTT

Product: putative N5,N10-methylenetetrahydromethanopterin reductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKIDFTLSDDIASTSTTAARVEKEGYAGAWVGETRHDPFMQCLQAATATSSLTIGTSIAIAFARTPMTLANLGYDLAQYS
EGRFVLGLGSQIKPHIEKRFSMPWSHPAARMRELILAIRAIWDCWQNGAKLDFRGDFYTHTLMTPFFTPKPHSFGPPPIY
LAGVGPGMTEVAGEVADGFLVHPFSTMRYVEEVTIPALLRGRAKAGKTDLEGFTICGPSFVTIGRTAQEMDRAVAATKKQ
IAFYGSTPAYRAVFDMHGWGEVQPELTALSKQGRWDDMADLVTDEMMAEFSVVGTPEEVGRALGEKIGGVYARTTLYDSG
GSDPAHWPAVLDAAR

Sequences:

>Translated_335_residues
MKIDFTLSDDIASTSTTAARVEKEGYAGAWVGETRHDPFMQCLQAATATSSLTIGTSIAIAFARTPMTLANLGYDLAQYS
EGRFVLGLGSQIKPHIEKRFSMPWSHPAARMRELILAIRAIWDCWQNGAKLDFRGDFYTHTLMTPFFTPKPHSFGPPPIY
LAGVGPGMTEVAGEVADGFLVHPFSTMRYVEEVTIPALLRGRAKAGKTDLEGFTICGPSFVTIGRTAQEMDRAVAATKKQ
IAFYGSTPAYRAVFDMHGWGEVQPELTALSKQGRWDDMADLVTDEMMAEFSVVGTPEEVGRALGEKIGGVYARTTLYDSG
GSDPAHWPAVLDAAR
>Mature_335_residues
MKIDFTLSDDIASTSTTAARVEKEGYAGAWVGETRHDPFMQCLQAATATSSLTIGTSIAIAFARTPMTLANLGYDLAQYS
EGRFVLGLGSQIKPHIEKRFSMPWSHPAARMRELILAIRAIWDCWQNGAKLDFRGDFYTHTLMTPFFTPKPHSFGPPPIY
LAGVGPGMTEVAGEVADGFLVHPFSTMRYVEEVTIPALLRGRAKAGKTDLEGFTICGPSFVTIGRTAQEMDRAVAATKKQ
IAFYGSTPAYRAVFDMHGWGEVQPELTALSKQGRWDDMADLVTDEMMAEFSVVGTPEEVGRALGEKIGGVYARTTLYDSG
GSDPAHWPAVLDAAR

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019919
- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 36502; Mature: 36502

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDFTLSDDIASTSTTAARVEKEGYAGAWVGETRHDPFMQCLQAATATSSLTIGTSIAI
CEEEEEECCCCCCCCHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEECHHEEE
AFARTPMTLANLGYDLAQYSEGRFVLGLGSQIKPHIEKRFSMPWSHPAARMRELILAIRA
EECCCCHHHHHCCCHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
IWDCWQNGAKLDFRGDFYTHTLMTPFFTPKPHSFGPPPIYLAGVGPGMTEVAGEVADGFL
HHHHHCCCCEEEECCCEEEHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEE
VHPFSTMRYVEEVTIPALLRGRAKAGKTDLEGFTICGPSFVTIGRTAQEMDRAVAATKKQ
ECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHH
IAFYGSTPAYRAVFDMHGWGEVQPELTALSKQGRWDDMADLVTDEMMAEFSVVGTPEEVG
EEEECCCCHHHHEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
RALGEKIGGVYARTTLYDSGGSDPAHWPAVLDAAR
HHHHHHHCCEEEEEEEECCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MKIDFTLSDDIASTSTTAARVEKEGYAGAWVGETRHDPFMQCLQAATATSSLTIGTSIAI
CEEEEEECCCCCCCCHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEECHHEEE
AFARTPMTLANLGYDLAQYSEGRFVLGLGSQIKPHIEKRFSMPWSHPAARMRELILAIRA
EECCCCHHHHHCCCHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
IWDCWQNGAKLDFRGDFYTHTLMTPFFTPKPHSFGPPPIYLAGVGPGMTEVAGEVADGFL
HHHHHCCCCEEEECCCEEEHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEE
VHPFSTMRYVEEVTIPALLRGRAKAGKTDLEGFTICGPSFVTIGRTAQEMDRAVAATKKQ
ECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHH
IAFYGSTPAYRAVFDMHGWGEVQPELTALSKQGRWDDMADLVTDEMMAEFSVVGTPEEVG
EEEECCCCHHHHEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
RALGEKIGGVYARTTLYDSGGSDPAHWPAVLDAAR
HHHHHHHCCEEEEEEEECCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]