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The map label for this gene is glxA [H]

Identifier: 158313838

GI number: 158313838

Start: 2408652

End: 2409680

Strand: Direct

Name: glxA [H]

Synonym: Franean1_2003

Alternate gene names: 158313838

Gene position: 2408652-2409680 (Clockwise)

Preceding gene: 158313836

Following gene: 158313841

Centisome position: 26.82

GC content: 73.66

Gene sequence:

>1029_bases
GTGGGACCGGCGGGATCACCCGTTGGCGGGAAACAGTCGCCTGGTTATCGTCCTGCCATGCACACCGTGGCGGTTCTCGC
CCTCGAGGGCGTGGTCCCCTTCGATCTCGCGGTGCCCGTCGACACCTTCGGCCGTGCCCGGCTCCCCGACGGCCGGGCGG
CCTATCGGGTGAAGATCTGCGCTGGTCGGAGCATCAGCGGCACCGTCGAGGCCGACGGCGGGGCGTTCTCCCTGCGGGCC
CCCTGGGGGCTGGACGCGCTCGCCGAGGCCGACACGATCGTCGTCCCCGGCGTCGGCGAGCAGGCCGGACCCCTGCCCCC
GGAGTCCGTCACCGCGTTGCGGGCCGCCGCCGCGCGCGGCACCCGCATCGCCTCCATCTGCGTCGGCGCGTTCCTGCTCG
CGCAGACCGGCCTGCTGGACGGCCTGCGCGCGACCACGCACTGGATCGCCGCCGAGGAGCTCGCCCGCCGTCATCCCGCC
GTGCGGGTGGACCCGAACGTGCTGTTCGTCGACAACGGGCAGATCCTGACCTCGGCCGGCGCCGCGGCCGGCCTCGACCT
GTGCCTGCACATGATCCGCTCCGACCATGGGGTCGCCGTGGCCGCGGACGTCGCCCGGCTGTCGGTCGTCCCGCTGGCCA
GGGAAGGTGGCCAGGCCCAGTTCATCGTCCGCGACCGCCCGCCGCCGGACGGCTCCGTCCTCGAACCACTGTTGCGGTGG
ATGGAGGCGAACTGCCACCGCCCGTTGACGGTGGACGACCTCGCCGCCCAGGCGATGACGAGCCCACGCACGCTCAACCG
CCGCTTCCGCGAACAGACGGGCACGACCCCGTCCCAGTGGCTGCACCGGGTGCGCCTGCGGCAGGCGCAGTACCTGCTTG
AGACCACCGGGCACTCTGTGGAGCGGATCGCCGCGCAGGTCGGCTTCGGATCGCCCACCGCCTTCCGGGACGGGTTTCGC
CGGCTGGTCGGCACCAGCCCCCAGGCCTACCGCCGGGCCTTCCGTGACGCTGTCACGCCTCCCGGGTAG

Upstream 100 bases:

>100_bases
CGAGGACTCCTCCCCTTCGGCCCTTGACACCCACAGCTGTCTGTGGTCAACAGTTCCTGTTCGTGGCGTAATACCCCCGT
GGGCTGGGCTCAGGTCAGGG

Downstream 100 bases:

>100_bases
GGAGCGCGTCGAAGACGGCGGGCCGCTTCTCCGTGCGCGCGGTCAGCGCCTCCGCGAGCCCGGGGCCCTCAAAGGCGATG
TCCATCCGGCGGAGCGTGTC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MGPAGSPVGGKQSPGYRPAMHTVAVLALEGVVPFDLAVPVDTFGRARLPDGRAAYRVKICAGRSISGTVEADGGAFSLRA
PWGLDALAEADTIVVPGVGEQAGPLPPESVTALRAAAARGTRIASICVGAFLLAQTGLLDGLRATTHWIAAEELARRHPA
VRVDPNVLFVDNGQILTSAGAAAGLDLCLHMIRSDHGVAVAADVARLSVVPLAREGGQAQFIVRDRPPPDGSVLEPLLRW
MEANCHRPLTVDDLAAQAMTSPRTLNRRFREQTGTTPSQWLHRVRLRQAQYLLETTGHSVERIAAQVGFGSPTAFRDGFR
RLVGTSPQAYRRAFRDAVTPPG

Sequences:

>Translated_342_residues
MGPAGSPVGGKQSPGYRPAMHTVAVLALEGVVPFDLAVPVDTFGRARLPDGRAAYRVKICAGRSISGTVEADGGAFSLRA
PWGLDALAEADTIVVPGVGEQAGPLPPESVTALRAAAARGTRIASICVGAFLLAQTGLLDGLRATTHWIAAEELARRHPA
VRVDPNVLFVDNGQILTSAGAAAGLDLCLHMIRSDHGVAVAADVARLSVVPLAREGGQAQFIVRDRPPPDGSVLEPLLRW
MEANCHRPLTVDDLAAQAMTSPRTLNRRFREQTGTTPSQWLHRVRLRQAQYLLETTGHSVERIAAQVGFGSPTAFRDGFR
RLVGTSPQAYRRAFRDAVTPPG
>Mature_341_residues
GPAGSPVGGKQSPGYRPAMHTVAVLALEGVVPFDLAVPVDTFGRARLPDGRAAYRVKICAGRSISGTVEADGGAFSLRAP
WGLDALAEADTIVVPGVGEQAGPLPPESVTALRAAAARGTRIASICVGAFLLAQTGLLDGLRATTHWIAAEELARRHPAV
RVDPNVLFVDNGQILTSAGAAAGLDLCLHMIRSDHGVAVAADVARLSVVPLAREGGQAQFIVRDRPPPDGSVLEPLLRWM
EANCHRPLTVDDLAAQAMTSPRTLNRRFREQTGTTPSQWLHRVRLRQAQYLLETTGHSVERIAAQVGFGSPTAFRDGFRR
LVGTSPQAYRRAFRDAVTPPG

Specific function: Activator Of The L-Rhamnose Operon. Rhar Putatively Autoregulates Its Synthesis. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI171474011, Length=136, Percent_Identity=30.8823529411765, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1790339, Length=102, Percent_Identity=38.2352941176471, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36270; Mature: 36139

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPAGSPVGGKQSPGYRPAMHTVAVLALEGVVPFDLAVPVDTFGRARLPDGRAAYRVKIC
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEEEE
AGRSISGTVEADGGAFSLRAPWGLDALAEADTIVVPGVGEQAGPLPPESVTALRAAAARG
ECCCCCCEEECCCCEEEEECCCCCHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC
TRIASICVGAFLLAQTGLLDGLRATTHWIAAEELARRHPAVRVDPNVLFVDNGQILTSAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCEEEECCC
AAAGLDLCLHMIRSDHGVAVAADVARLSVVPLAREGGQAQFIVRDRPPPDGSVLEPLLRW
CHHHHHHHHHHHHCCCCEEEEHHHHHHEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHH
MEANCHRPLTVDDLAAQAMTSPRTLNRRFREQTGTTPSQWLHRVRLRQAQYLLETTGHSV
HHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHH
ERIAAQVGFGSPTAFRDGFRRLVGTSPQAYRRAFRDAVTPPG
HHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GPAGSPVGGKQSPGYRPAMHTVAVLALEGVVPFDLAVPVDTFGRARLPDGRAAYRVKIC
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEEEE
AGRSISGTVEADGGAFSLRAPWGLDALAEADTIVVPGVGEQAGPLPPESVTALRAAAARG
ECCCCCCEEECCCCEEEEECCCCCHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC
TRIASICVGAFLLAQTGLLDGLRATTHWIAAEELARRHPAVRVDPNVLFVDNGQILTSAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCEEEECCC
AAAGLDLCLHMIRSDHGVAVAADVARLSVVPLAREGGQAQFIVRDRPPPDGSVLEPLLRW
CHHHHHHHHHHHHCCCCEEEEHHHHHHEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHH
MEANCHRPLTVDDLAAQAMTSPRTLNRRFREQTGTTPSQWLHRVRLRQAQYLLETTGHSV
HHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHH
ERIAAQVGFGSPTAFRDGFRRLVGTSPQAYRRAFRDAVTPPG
HHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]