| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313842
Identifier: 158313842
GI number: 158313842
Start: 2412929
End: 2413975
Strand: Direct
Name: 158313842
Synonym: Franean1_2007
Alternate gene names: NA
Gene position: 2412929-2413975 (Clockwise)
Preceding gene: 158313841
Following gene: 158313843
Centisome position: 26.86
GC content: 70.77
Gene sequence:
>1047_bases ATGGCCTCGAGTTGGGAACTTGTGCCCCCACCGCCTGCGGAGCCGCCGCTGCACCCGCGGCGCGGCATACACGAGCCGAC CGCAGGCAGCCCCCCGCGCCGTCCCGGTTCGGTGCGGCGAACGATCACACTCGACTCGCTGCGCCCGGACGGCCCGACCG GAAACCTGATCCTGATCGGCCGCGGTCGGGACCTGGCCACCGGCCCCGAGGGCGCCGCCTCCGTGATCGCCGAGGCGATG TTCCGCTTCGAGATCGCCTTCCAGAGCCGTCGCGAAATCCTGCGCGTCGAGACTGCTCCAGAGGTCCCCGAACTGGCCGG CCTCATCGGCGTGAGCTCCACATCCGGCTTCCGTCGTCACCTGGCCGAGATCGTGCCGGAGCTCCGGGCCACCCATCCTC TGCTTGCCGCGTTGTTCGACGACGCCCCGGTGACCTCGCTCGTCTCCGGCTACGCGACAACTCGCATGGGCCTCGTTCAC GGCGATGGACGGATCATGCTGGCGCAGGCCGACCAATGCGCAGGCTGGGCGCGCGGTGCGACGATCATCAACTCGATCGA GGACGGGAGCGGCCCACCCATGGTCACCGGCCCACGGGCGCCGTCCCTGCTGGTGCCCGATGATCCGATGGCATGGCATG CGCTGACCGGACTGCCTCCGCACGGCATGCGGCGGGCCCGCCGCCTTGACCTGCTGCCCGCCGGCGTCGACGCACTGCAG GTGGACGTGCTTTTCCGGGACAGCTACCAGTCCGACAGCGGACCTGAGGCCGTCATCCACGAGTACACGGTGAACGCGCT GCTCGACCCGGAGACAATGACGTTCACCGAGATCGTGTCGACTCCGCGCGCGCTGCCGTGGGTCGAGTGCCCGAGCGCGG CCGCGAGCGCCGCCCGGCTGGCTGGCGCCGCAGCCGCAGACGCCCGGCAGGCCGTGGGTACAACCTTCCGCGGTACGTCC ACCTGCACGCACCTGAACGACACACTGCGATCGCTCGGCGATGTCCCCGCTCTGGCGGCCATGCTGCCAGGGCGCTCGGC ACCGTAG
Upstream 100 bases:
>100_bases CGCGGCCCGCTGACCCGCCCGGCACGCCCCATCATCGGGAATGGGTAGCCGTCGTCAGGTGTCCTCCTAGGCGAGCCCCG AGTGGCAAAGGGGGATGAGG
Downstream 100 bases:
>100_bases GCGTGATCTTGCGGCGAGTGTGTCGATGGGAGAAGGTGGACAGATTCGGCCGGGACACAGTTTCTTCGGGAGTCTTTCGT GGGTAGCCACAGTTTCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MASSWELVPPPPAEPPLHPRRGIHEPTAGSPPRRPGSVRRTITLDSLRPDGPTGNLILIGRGRDLATGPEGAASVIAEAM FRFEIAFQSRREILRVETAPEVPELAGLIGVSSTSGFRRHLAEIVPELRATHPLLAALFDDAPVTSLVSGYATTRMGLVH GDGRIMLAQADQCAGWARGATIINSIEDGSGPPMVTGPRAPSLLVPDDPMAWHALTGLPPHGMRRARRLDLLPAGVDALQ VDVLFRDSYQSDSGPEAVIHEYTVNALLDPETMTFTEIVSTPRALPWVECPSAAASAARLAGAAAADARQAVGTTFRGTS TCTHLNDTLRSLGDVPALAAMLPGRSAP
Sequences:
>Translated_348_residues MASSWELVPPPPAEPPLHPRRGIHEPTAGSPPRRPGSVRRTITLDSLRPDGPTGNLILIGRGRDLATGPEGAASVIAEAM FRFEIAFQSRREILRVETAPEVPELAGLIGVSSTSGFRRHLAEIVPELRATHPLLAALFDDAPVTSLVSGYATTRMGLVH GDGRIMLAQADQCAGWARGATIINSIEDGSGPPMVTGPRAPSLLVPDDPMAWHALTGLPPHGMRRARRLDLLPAGVDALQ VDVLFRDSYQSDSGPEAVIHEYTVNALLDPETMTFTEIVSTPRALPWVECPSAAASAARLAGAAAADARQAVGTTFRGTS TCTHLNDTLRSLGDVPALAAMLPGRSAP >Mature_347_residues ASSWELVPPPPAEPPLHPRRGIHEPTAGSPPRRPGSVRRTITLDSLRPDGPTGNLILIGRGRDLATGPEGAASVIAEAMF RFEIAFQSRREILRVETAPEVPELAGLIGVSSTSGFRRHLAEIVPELRATHPLLAALFDDAPVTSLVSGYATTRMGLVHG DGRIMLAQADQCAGWARGATIINSIEDGSGPPMVTGPRAPSLLVPDDPMAWHALTGLPPHGMRRARRLDLLPAGVDALQV DVLFRDSYQSDSGPEAVIHEYTVNALLDPETMTFTEIVSTPRALPWVECPSAAASAARLAGAAAADARQAVGTTFRGTST CTHLNDTLRSLGDVPALAAMLPGRSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36751; Mature: 36620
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSWELVPPPPAEPPLHPRRGIHEPTAGSPPRRPGSVRRTITLDSLRPDGPTGNLILIG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE RGRDLATGPEGAASVIAEAMFRFEIAFQSRREILRVETAPEVPELAGLIGVSSTSGFRRH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCHHHHHH LAEIVPELRATHPLLAALFDDAPVTSLVSGYATTRMGLVHGDGRIMLAQADQCAGWARGA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCEEEEEECHHHCCHHHCH TIINSIEDGSGPPMVTGPRAPSLLVPDDPMAWHALTGLPPHGMRRARRLDLLPAGVDALQ HHHHHCCCCCCCCEEECCCCCEEEECCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCEEE VDVLFRDSYQSDSGPEAVIHEYTVNALLDPETMTFTEIVSTPRALPWVECPSAAASAARL EEEEEECCCCCCCCCHHHHHHEEHHEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH AGAAAADARQAVGTTFRGTSTCTHLNDTLRSLGDVPALAAMLPGRSAP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCC >Mature Secondary Structure ASSWELVPPPPAEPPLHPRRGIHEPTAGSPPRRPGSVRRTITLDSLRPDGPTGNLILIG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE RGRDLATGPEGAASVIAEAMFRFEIAFQSRREILRVETAPEVPELAGLIGVSSTSGFRRH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCHHHHHH LAEIVPELRATHPLLAALFDDAPVTSLVSGYATTRMGLVHGDGRIMLAQADQCAGWARGA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCEEEEEECHHHCCHHHCH TIINSIEDGSGPPMVTGPRAPSLLVPDDPMAWHALTGLPPHGMRRARRLDLLPAGVDALQ HHHHHCCCCCCCCEEECCCCCEEEECCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCEEE VDVLFRDSYQSDSGPEAVIHEYTVNALLDPETMTFTEIVSTPRALPWVECPSAAASAARL EEEEEECCCCCCCCCHHHHHHEEHHEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH AGAAAADARQAVGTTFRGTSTCTHLNDTLRSLGDVPALAAMLPGRSAP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA