Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313836

Identifier: 158313836

GI number: 158313836

Start: 2407324

End: 2407917

Strand: Direct

Name: 158313836

Synonym: Franean1_2001

Alternate gene names: NA

Gene position: 2407324-2407917 (Clockwise)

Preceding gene: 158313834

Following gene: 158313838

Centisome position: 26.8

GC content: 74.24

Gene sequence:

>594_bases
TTGAACGCGCACGCAGGTCACGGGTCGGATGGCGCGGGGGGCCGGGGATCGGGCCACGACCCCGGCCAGGGTGCCGGTCG
CGAGCACGACCACGGGAGCGGCCGAGCGGGGGAGACCGCCGCCGAGCCCCGCTGGCTCGACGCCAACGAACGGGCGGCCT
GGCGCGGTCTGATCGGTGTGATGACCCGGCTGCCCGCCGCCCTCGACACCCAGCTCCGCCGGGACGCCGGACTGAGCCAC
TTCGAGTACTCGGTGCTGGTCGGGCTCTCGGAGGCACCGAACCGGACGCTCGCGATGGCTCGGCTCGCCCAGTTCACCTG
CGGCTCGCTGTCCAGGCTCTCGCACGCGGTCAAGCGCCTCGAGGACAAGGGCTGGGTGCGCCGTGCCCCGTGCGCGGCCG
ACGGACGAGTCACGAACGCCACGCTGACCGACACCGGTTTCGCGAAGCTGGCCGACTCCGCTCCCGGCCATGTGGAGACC
GTTCGCGACCTGGTCGTCGAGGCGCTCGCGCGCGACCAGCTCGACCAGCTCGCGGCCATCTGCGGCCAGATCCTCGACCG
CCTCGACACCGCGCCGCCGCCCCGGCCCCGCTGA

Upstream 100 bases:

>100_bases
TAGACAAGGGGCGGCGGACGTCCGCGACGCCGGCCGGCACGCAGGCCCGGCCCGCCGTCCACCGGTCGGTACATCAAGTC
GGAAGGCACAGGCAGACAGC

Downstream 100 bases:

>100_bases
ACCGCCGGCCCGGGCCGGGTCAGACGCCTGTGGTCGACCCCGGACGGGCGATCATCAGCACCGTGACCACGGCCCAGAGC
AGGCTGAACATGCCAGTGGT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Regulatory Protein MarR; MarR-Family Regulatory Protein; MarR-Family Transcriptional Repressor; Marr Family Transcriptional Regulator; Transcriptional Regulator-Like Protein; MarR Family Regulatory Protein; Transcription Factor; MarR Family Transcriptional Repressor; Transcriptional Regulator MarR; MarR-Family Protein Transcriptional Regulator; MarR-Family Protein Regulatory Protein; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNAHAGHGSDGAGGRGSGHDPGQGAGREHDHGSGRAGETAAEPRWLDANERAAWRGLIGVMTRLPAALDTQLRRDAGLSH
FEYSVLVGLSEAPNRTLAMARLAQFTCGSLSRLSHAVKRLEDKGWVRRAPCAADGRVTNATLTDTGFAKLADSAPGHVET
VRDLVVEALARDQLDQLAAICGQILDRLDTAPPPRPR

Sequences:

>Translated_197_residues
MNAHAGHGSDGAGGRGSGHDPGQGAGREHDHGSGRAGETAAEPRWLDANERAAWRGLIGVMTRLPAALDTQLRRDAGLSH
FEYSVLVGLSEAPNRTLAMARLAQFTCGSLSRLSHAVKRLEDKGWVRRAPCAADGRVTNATLTDTGFAKLADSAPGHVET
VRDLVVEALARDQLDQLAAICGQILDRLDTAPPPRPR
>Mature_197_residues
MNAHAGHGSDGAGGRGSGHDPGQGAGREHDHGSGRAGETAAEPRWLDANERAAWRGLIGVMTRLPAALDTQLRRDAGLSH
FEYSVLVGLSEAPNRTLAMARLAQFTCGSLSRLSHAVKRLEDKGWVRRAPCAADGRVTNATLTDTGFAKLADSAPGHVET
VRDLVVEALARDQLDQLAAICGQILDRLDTAPPPRPR

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20866; Mature: 20866

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAHAGHGSDGAGGRGSGHDPGQGAGREHDHGSGRAGETAAEPRWLDANERAAWRGLIGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
MTRLPAALDTQLRRDAGLSHFEYSVLVGLSEAPNRTLAMARLAQFTCGSLSRLSHAVKRL
HHHCCHHHHHHHHHHCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EDKGWVRRAPCAADGRVTNATLTDTGFAKLADSAPGHVETVRDLVVEALARDQLDQLAAI
HHCCCEECCCCCCCCCCCCCEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
CGQILDRLDTAPPPRPR
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNAHAGHGSDGAGGRGSGHDPGQGAGREHDHGSGRAGETAAEPRWLDANERAAWRGLIGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
MTRLPAALDTQLRRDAGLSHFEYSVLVGLSEAPNRTLAMARLAQFTCGSLSRLSHAVKRL
HHHCCHHHHHHHHHHCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EDKGWVRRAPCAADGRVTNATLTDTGFAKLADSAPGHVETVRDLVVEALARDQLDQLAAI
HHCCCEECCCCCCCCCCCCCEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
CGQILDRLDTAPPPRPR
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA