| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313836
Identifier: 158313836
GI number: 158313836
Start: 2407324
End: 2407917
Strand: Direct
Name: 158313836
Synonym: Franean1_2001
Alternate gene names: NA
Gene position: 2407324-2407917 (Clockwise)
Preceding gene: 158313834
Following gene: 158313838
Centisome position: 26.8
GC content: 74.24
Gene sequence:
>594_bases TTGAACGCGCACGCAGGTCACGGGTCGGATGGCGCGGGGGGCCGGGGATCGGGCCACGACCCCGGCCAGGGTGCCGGTCG CGAGCACGACCACGGGAGCGGCCGAGCGGGGGAGACCGCCGCCGAGCCCCGCTGGCTCGACGCCAACGAACGGGCGGCCT GGCGCGGTCTGATCGGTGTGATGACCCGGCTGCCCGCCGCCCTCGACACCCAGCTCCGCCGGGACGCCGGACTGAGCCAC TTCGAGTACTCGGTGCTGGTCGGGCTCTCGGAGGCACCGAACCGGACGCTCGCGATGGCTCGGCTCGCCCAGTTCACCTG CGGCTCGCTGTCCAGGCTCTCGCACGCGGTCAAGCGCCTCGAGGACAAGGGCTGGGTGCGCCGTGCCCCGTGCGCGGCCG ACGGACGAGTCACGAACGCCACGCTGACCGACACCGGTTTCGCGAAGCTGGCCGACTCCGCTCCCGGCCATGTGGAGACC GTTCGCGACCTGGTCGTCGAGGCGCTCGCGCGCGACCAGCTCGACCAGCTCGCGGCCATCTGCGGCCAGATCCTCGACCG CCTCGACACCGCGCCGCCGCCCCGGCCCCGCTGA
Upstream 100 bases:
>100_bases TAGACAAGGGGCGGCGGACGTCCGCGACGCCGGCCGGCACGCAGGCCCGGCCCGCCGTCCACCGGTCGGTACATCAAGTC GGAAGGCACAGGCAGACAGC
Downstream 100 bases:
>100_bases ACCGCCGGCCCGGGCCGGGTCAGACGCCTGTGGTCGACCCCGGACGGGCGATCATCAGCACCGTGACCACGGCCCAGAGC AGGCTGAACATGCCAGTGGT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Regulatory Protein MarR; MarR-Family Regulatory Protein; MarR-Family Transcriptional Repressor; Marr Family Transcriptional Regulator; Transcriptional Regulator-Like Protein; MarR Family Regulatory Protein; Transcription Factor; MarR Family Transcriptional Repressor; Transcriptional Regulator MarR; MarR-Family Protein Transcriptional Regulator; MarR-Family Protein Regulatory Protein; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MNAHAGHGSDGAGGRGSGHDPGQGAGREHDHGSGRAGETAAEPRWLDANERAAWRGLIGVMTRLPAALDTQLRRDAGLSH FEYSVLVGLSEAPNRTLAMARLAQFTCGSLSRLSHAVKRLEDKGWVRRAPCAADGRVTNATLTDTGFAKLADSAPGHVET VRDLVVEALARDQLDQLAAICGQILDRLDTAPPPRPR
Sequences:
>Translated_197_residues MNAHAGHGSDGAGGRGSGHDPGQGAGREHDHGSGRAGETAAEPRWLDANERAAWRGLIGVMTRLPAALDTQLRRDAGLSH FEYSVLVGLSEAPNRTLAMARLAQFTCGSLSRLSHAVKRLEDKGWVRRAPCAADGRVTNATLTDTGFAKLADSAPGHVET VRDLVVEALARDQLDQLAAICGQILDRLDTAPPPRPR >Mature_197_residues MNAHAGHGSDGAGGRGSGHDPGQGAGREHDHGSGRAGETAAEPRWLDANERAAWRGLIGVMTRLPAALDTQLRRDAGLSH FEYSVLVGLSEAPNRTLAMARLAQFTCGSLSRLSHAVKRLEDKGWVRRAPCAADGRVTNATLTDTGFAKLADSAPGHVET VRDLVVEALARDQLDQLAAICGQILDRLDTAPPPRPR
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20866; Mature: 20866
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHAGHGSDGAGGRGSGHDPGQGAGREHDHGSGRAGETAAEPRWLDANERAAWRGLIGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH MTRLPAALDTQLRRDAGLSHFEYSVLVGLSEAPNRTLAMARLAQFTCGSLSRLSHAVKRL HHHCCHHHHHHHHHHCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EDKGWVRRAPCAADGRVTNATLTDTGFAKLADSAPGHVETVRDLVVEALARDQLDQLAAI HHCCCEECCCCCCCCCCCCCEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CGQILDRLDTAPPPRPR HHHHHHHHCCCCCCCCC >Mature Secondary Structure MNAHAGHGSDGAGGRGSGHDPGQGAGREHDHGSGRAGETAAEPRWLDANERAAWRGLIGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH MTRLPAALDTQLRRDAGLSHFEYSVLVGLSEAPNRTLAMARLAQFTCGSLSRLSHAVKRL HHHCCHHHHHHHHHHCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EDKGWVRRAPCAADGRVTNATLTDTGFAKLADSAPGHVETVRDLVVEALARDQLDQLAAI HHCCCEECCCCCCCCCCCCCEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CGQILDRLDTAPPPRPR HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA